RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 POLR3GLQ9BT43 218 aa17.52■□□□□ 0.4
SFI1-229ENST00000540643 ANP32BQ92688 251 aaKnown RBP17.51■□□□□ 0.39
SFI1-229ENST00000540643 TRIM44Q96DX7 344 aaPredicted RBP17.5■□□□□ 0.39
SFI1-229ENST00000540643 UBTFP17480 764 aaKnown RBP17.49■□□□□ 0.39
SFI1-229ENST00000540643 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
SFI1-229ENST00000540643 NACADO15069 1562 aa17.48■□□□□ 0.39
SFI1-229ENST00000540643 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
SFI1-229ENST00000540643 USP35Q9P2H5 1018 aa17.42■□□□□ 0.38
SFI1-229ENST00000540643 CECR2Q9BXF3 1484 aa17.41■□□□□ 0.38
SFI1-229ENST00000540643 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
SFI1-229ENST00000540643 DDX10Q13206 875 aaKnown RBP17.4■□□□□ 0.38
SFI1-229ENST00000540643 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
SFI1-229ENST00000540643 BRPF3Q9ULD4 1205 aa17.39■□□□□ 0.37
SFI1-229ENST00000540643 RB1CC1Q8TDY2 1594 aa17.38■□□□□ 0.37
SFI1-229ENST00000540643 CANXP27824 592 aaKnown RBP17.37■□□□□ 0.37
SFI1-229ENST00000540643 B4GALNT3Q6L9W6 998 aa17.36■□□□□ 0.37
SFI1-229ENST00000540643 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
SFI1-229ENST00000540643 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
SFI1-229ENST00000540643 MSH5O43196 834 aa17.3■□□□□ 0.36
SFI1-229ENST00000540643 PPP4R2Q9NY27 417 aa17.27■□□□□ 0.36
SFI1-229ENST00000540643 HAP1P54257 671 aaPredicted RBP17.26■□□□□ 0.35
SFI1-229ENST00000540643 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
SFI1-229ENST00000540643 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
SFI1-229ENST00000540643 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
SFI1-229ENST00000540643 GSE1Q14687 1217 aa17.24■□□□□ 0.35
SFI1-229ENST00000540643 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
SFI1-229ENST00000540643 BBXQ8WY36 941 aaPredicted RBP17.22■□□□□ 0.35
SFI1-229ENST00000540643 MROH2BQ7Z745 1585 aa17.21■□□□□ 0.34
SFI1-229ENST00000540643 APPP05067 770 aa17.2■□□□□ 0.34
SFI1-229ENST00000540643 L1TD1Q5T7N2 865 aaKnown RBP17.17■□□□□ 0.34
SFI1-229ENST00000540643 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
SFI1-229ENST00000540643 TAF7LQ5H9L4 462 aa17.17■□□□□ 0.34
SFI1-229ENST00000540643 TNNT3P45378 269 aaPredicted RBP17.14■□□□□ 0.33
SFI1-229ENST00000540643 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
SFI1-229ENST00000540643 RRP9O43818 475 aaKnown RBP17.13■□□□□ 0.33
SFI1-229ENST00000540643 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
SFI1-229ENST00000540643 FGD1P98174 961 aa17.08■□□□□ 0.33
SFI1-229ENST00000540643 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
SFI1-229ENST00000540643 ATP1B4Q9UN42 357 aaPredicted RBP17.07■□□□□ 0.32
SFI1-229ENST00000540643 MSNP26038 577 aaKnown RBP17.04■□□□□ 0.32
SFI1-229ENST00000540643 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
SFI1-229ENST00000540643 GZF1Q9H116 711 aaPredicted RBP17.03■□□□□ 0.32
SFI1-229ENST00000540643 WIZO95785 1651 aa17.02■□□□□ 0.32
SFI1-229ENST00000540643 KLHL34Q8N239 644 aa17.02■□□□□ 0.32
SFI1-229ENST00000540643 PLCD3Q8N3E9 789 aa17.02■□□□□ 0.32
SFI1-229ENST00000540643 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.31
SFI1-229ENST00000540643 FAM43AQ8N2R8 423 aa17.01■□□□□ 0.31
SFI1-229ENST00000540643 ZBTB7CA1YPR0 619 aa17.01■□□□□ 0.31
SFI1-229ENST00000540643 PTMSP20962 102 aa17.01■□□□□ 0.31
SFI1-229ENST00000540643 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
SFI1-229ENST00000540643 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
SFI1-229ENST00000540643 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
SFI1-229ENST00000540643 UPF2Q9HAU5 1272 aaKnown RBP16.99■□□□□ 0.31
SFI1-229ENST00000540643 RGS3P49796 1198 aa16.98■□□□□ 0.31
SFI1-229ENST00000540643 PTMAP06454 111 aaKnown RBP16.95■□□□□ 0.3
SFI1-229ENST00000540643 FRAT1Q92837 279 aaPredicted RBP16.95■□□□□ 0.3
SFI1-229ENST00000540643 BECN1Q14457 450 aa16.95■□□□□ 0.3
SFI1-229ENST00000540643 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
SFI1-229ENST00000540643 AAMPQ13685 434 aa16.94■□□□□ 0.3
SFI1-229ENST00000540643 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
SFI1-229ENST00000540643 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
SFI1-229ENST00000540643 PATL2C9JE40 543 aaKnown RBP16.92■□□□□ 0.3
SFI1-229ENST00000540643 GOLGA6L3A6NEY3 463 aa16.91■□□□□ 0.3
SFI1-229ENST00000540643 DHX37Q8IY37 1157 aaKnown RBP16.91■□□□□ 0.3
SFI1-229ENST00000540643 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
SFI1-229ENST00000540643 SLC4A3P48751 1232 aa16.89■□□□□ 0.29
SFI1-229ENST00000540643 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.29
SFI1-229ENST00000540643 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
SFI1-229ENST00000540643 MRS2Q9HD23 443 aa16.86■□□□□ 0.29
SFI1-229ENST00000540643 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.29
SFI1-229ENST00000540643 E9PSI1 815 aa16.83■□□□□ 0.28
SFI1-229ENST00000540643 CHMP4AQ9BY43 222 aa16.83■□□□□ 0.28
SFI1-229ENST00000540643 CCDC88BA6NC98 1476 aa16.83■□□□□ 0.28
SFI1-229ENST00000540643 PRDM10Q9NQV6 1147 aa16.82■□□□□ 0.28
SFI1-229ENST00000540643 C14orf37Q86TY3 774 aa16.82■□□□□ 0.28
SFI1-229ENST00000540643 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
SFI1-229ENST00000540643 SMARCA4P51532 1647 aa16.77■□□□□ 0.28
SFI1-229ENST00000540643 SPRYD3Q8NCJ5 442 aa16.76■□□□□ 0.27
SFI1-229ENST00000540643 MAP7D2Q96T17 732 aa16.76■□□□□ 0.27
SFI1-229ENST00000540643 TPM2P07951 284 aa16.74■□□□□ 0.27
SFI1-229ENST00000540643 VGLL3A8MV65 326 aa16.74■□□□□ 0.27
SFI1-229ENST00000540643 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
SFI1-229ENST00000540643 PDCL3Q9H2J4 239 aa16.73■□□□□ 0.27
SFI1-229ENST00000540643 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
SFI1-229ENST00000540643 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
SFI1-229ENST00000540643 TULP1O00294 542 aaPredicted RBP16.72■□□□□ 0.27
SFI1-229ENST00000540643 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
SFI1-229ENST00000540643 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
SFI1-229ENST00000540643 R3HCC1Q9Y3T6 440 aaKnown RBP16.68■□□□□ 0.26
SFI1-229ENST00000540643 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
SFI1-229ENST00000540643 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
SFI1-229ENST00000540643 SIN3AQ96ST3 1273 aa16.66■□□□□ 0.26
SFI1-229ENST00000540643 PLCB2Q00722 1185 aa16.65■□□□□ 0.26
SFI1-229ENST00000540643 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
SFI1-229ENST00000540643 SOGA1O94964 1423 aa16.64■□□□□ 0.25
SFI1-229ENST00000540643 PDE4AP27815 886 aa16.63■□□□□ 0.25
SFI1-229ENST00000540643 IRX3P78415 501 aaPredicted RBP16.63■□□□□ 0.25
SFI1-229ENST00000540643 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
SFI1-229ENST00000540643 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
SFI1-229ENST00000540643 FRAT2O75474 233 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms