RNA–Protein interactions for RNA: ENST00000534749.5

PITPNM1-216, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNM1, Length 4,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-216ENST00000534749 CCNB3Q8WWL7 1395 aa20.4■□□□□ 0.86
PITPNM1-216ENST00000534749 BCL11AQ9H165 835 aa20.38■□□□□ 0.85
PITPNM1-216ENST00000534749 EIF4G2P78344 907 aaKnown RBP eCLIP20.38■□□□□ 0.858e-7■■■■■ 28.7
PITPNM1-216ENST00000534749 TMC1Q8TDI8 760 aa20.36■□□□□ 0.85
PITPNM1-216ENST00000534749 SUPT16HQ9Y5B9 1047 aaKnown RBP20.35■□□□□ 0.85
PITPNM1-216ENST00000534749 CUX2O14529 1486 aa20.31■□□□□ 0.84
PITPNM1-216ENST00000534749 CARMIL1Q5VZK9 1371 aa20.31■□□□□ 0.84
PITPNM1-216ENST00000534749 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
PITPNM1-216ENST00000534749 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
PITPNM1-216ENST00000534749 TSPY4P0CV99 314 aa20.28■□□□□ 0.84
PITPNM1-216ENST00000534749 TSPY10P0CW01 314 aa20.28■□□□□ 0.84
PITPNM1-216ENST00000534749 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.84
PITPNM1-216ENST00000534749 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
PITPNM1-216ENST00000534749 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.83
PITPNM1-216ENST00000534749 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
PITPNM1-216ENST00000534749 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
PITPNM1-216ENST00000534749 ANP32AP39687 249 aaKnown RBP20.24■□□□□ 0.83
PITPNM1-216ENST00000534749 KCNH8Q96L42 1107 aa20.24■□□□□ 0.83
PITPNM1-216ENST00000534749 CANXP27824 592 aaKnown RBP20.23■□□□□ 0.83
PITPNM1-216ENST00000534749 FOXD1Q16676 465 aa20.23■□□□□ 0.83
PITPNM1-216ENST00000534749 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
PITPNM1-216ENST00000534749 NBR1Q14596 966 aa20.21■□□□□ 0.83
PITPNM1-216ENST00000534749 RAB3GAP2Q9H2M9 1393 aa20.19■□□□□ 0.82
PITPNM1-216ENST00000534749 CFDP1Q9UEE9 299 aaPredicted RBP20.16■□□□□ 0.82
PITPNM1-216ENST00000534749 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
PITPNM1-216ENST00000534749 TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
PITPNM1-216ENST00000534749 PLEKHD1A6NEE1 506 aa20.09■□□□□ 0.81
PITPNM1-216ENST00000534749 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
PITPNM1-216ENST00000534749 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
PITPNM1-216ENST00000534749 B4GALNT3Q6L9W6 998 aa20.06■□□□□ 0.8
PITPNM1-216ENST00000534749 DHX57Q6P158 1386 aaKnown RBP20.06■□□□□ 0.8
PITPNM1-216ENST00000534749 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
PITPNM1-216ENST00000534749 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
PITPNM1-216ENST00000534749 HSPA5P11021 654 aaKnown RBP20.04■□□□□ 0.8
PITPNM1-216ENST00000534749 PPP1R15AO75807 674 aaPredicted RBP20.03■□□□□ 0.8
PITPNM1-216ENST00000534749 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
PITPNM1-216ENST00000534749 ZBTB47Q9UFB7 747 aaPredicted RBP19.99■□□□□ 0.79
PITPNM1-216ENST00000534749 FHOD3Q2V2M9 1422 aa19.99■□□□□ 0.79
PITPNM1-216ENST00000534749 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
PITPNM1-216ENST00000534749 SLC24A1O60721 1099 aa19.98■□□□□ 0.79
PITPNM1-216ENST00000534749 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
PITPNM1-216ENST00000534749 ANP32EQ9BTT0 268 aa19.97■□□□□ 0.79
PITPNM1-216ENST00000534749 BICRAQ9NZM4 1560 aa19.97■□□□□ 0.79
PITPNM1-216ENST00000534749 ARHGAP35Q9NRY4 1499 aa19.94■□□□□ 0.78
PITPNM1-216ENST00000534749 TIMELESSQ9UNS1 1208 aa19.93■□□□□ 0.78
PITPNM1-216ENST00000534749 DCAF11Q8TEB1 546 aa19.93■□□□□ 0.78
PITPNM1-216ENST00000534749 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
PITPNM1-216ENST00000534749 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
PITPNM1-216ENST00000534749 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
PITPNM1-216ENST00000534749 TSHZ2Q9NRE2 1034 aa19.9■□□□□ 0.78
PITPNM1-216ENST00000534749 CCER2I3L3R5 266 aa19.89■□□□□ 0.78
PITPNM1-216ENST00000534749 CC2D1BQ5T0F9 858 aaKnown RBP19.89■□□□□ 0.77
PITPNM1-216ENST00000534749 L3MBTL2Q969R5 705 aa19.89■□□□□ 0.77
PITPNM1-216ENST00000534749 PPP4R2Q9NY27 417 aa19.88■□□□□ 0.77
PITPNM1-216ENST00000534749 NEFMP07197 916 aa19.87■□□□□ 0.77
PITPNM1-216ENST00000534749 PKD2Q13563 968 aa19.86■□□□□ 0.77
PITPNM1-216ENST00000534749 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
PITPNM1-216ENST00000534749 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
PITPNM1-216ENST00000534749 ARXQ96QS3 562 aa19.83■□□□□ 0.77
PITPNM1-216ENST00000534749 NPM1P06748 294 aaKnown RBP eCLIP19.83■□□□□ 0.76
PITPNM1-216ENST00000534749 NEUROD2Q15784 382 aa19.83■□□□□ 0.76
PITPNM1-216ENST00000534749 TNNT2P45379 298 aaPredicted RBP19.78■□□□□ 0.76
PITPNM1-216ENST00000534749 IGF1RP08069 1367 aa19.78■□□□□ 0.76
PITPNM1-216ENST00000534749 KNSTRNQ9Y448 316 aa19.77■□□□□ 0.76
PITPNM1-216ENST00000534749 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.76■□□□□ 0.75
PITPNM1-216ENST00000534749 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
PITPNM1-216ENST00000534749 KIF21BO75037 1637 aa19.74■□□□□ 0.75
PITPNM1-216ENST00000534749 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
PITPNM1-216ENST00000534749 LAS1LQ9Y4W2 734 aaKnown RBP19.71■□□□□ 0.75
PITPNM1-216ENST00000534749 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
PITPNM1-216ENST00000534749 RGS3P49796 1198 aa19.7■□□□□ 0.74
PITPNM1-216ENST00000534749 EIF5BO60841 1220 aaKnown RBP19.69■□□□□ 0.74
PITPNM1-216ENST00000534749 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
PITPNM1-216ENST00000534749 UPF2Q9HAU5 1272 aaKnown RBP19.68■□□□□ 0.74
PITPNM1-216ENST00000534749 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
PITPNM1-216ENST00000534749 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
PITPNM1-216ENST00000534749 NUP155O75694 1391 aa19.66■□□□□ 0.74
PITPNM1-216ENST00000534749 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
PITPNM1-216ENST00000534749 ESF1Q9H501 851 aaKnown RBP19.66■□□□□ 0.74
PITPNM1-216ENST00000534749 HSP90AA1P07900 732 aaKnown RBP19.66■□□□□ 0.74
PITPNM1-216ENST00000534749 HNRNPMP52272 730 aaKnown RBP eCLIP19.65■□□□□ 0.74
PITPNM1-216ENST00000534749 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
PITPNM1-216ENST00000534749 PPM1GO15355 546 aaPredicted RBP19.63■□□□□ 0.73
PITPNM1-216ENST00000534749 FRAT1Q92837 279 aaPredicted RBP19.62■□□□□ 0.73
PITPNM1-216ENST00000534749 ZNF644Q9H582 1327 aaPredicted RBP19.61■□□□□ 0.73
PITPNM1-216ENST00000534749 NOP58Q9Y2X3 529 aaKnown RBP19.6■□□□□ 0.73
PITPNM1-216ENST00000534749 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
PITPNM1-216ENST00000534749 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
PITPNM1-216ENST00000534749 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
PITPNM1-216ENST00000534749 PLEKHG5O94827 1062 aa19.59■□□□□ 0.73
PITPNM1-216ENST00000534749 TMF1P82094 1093 aa19.57■□□□□ 0.72
PITPNM1-216ENST00000534749 PRKRIP1Q9H875 184 aaPredicted RBP19.57■□□□□ 0.72
PITPNM1-216ENST00000534749 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
PITPNM1-216ENST00000534749 ST20-MTHFSA0A0A6YYL1 179 aa19.56■□□□□ 0.72
PITPNM1-216ENST00000534749 SAFB2Q14151 953 aaKnown RBP eCLIP19.56■□□□□ 0.72
PITPNM1-216ENST00000534749 RTN4Q9NQC3 1192 aaKnown RBP19.54■□□□□ 0.72
PITPNM1-216ENST00000534749 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
PITPNM1-216ENST00000534749 CDCA8Q53HL2 280 aa19.54■□□□□ 0.72
PITPNM1-216ENST00000534749 JPH4Q96JJ6 628 aa19.51■□□□□ 0.71
PITPNM1-216ENST00000534749 ROCK2O75116 1388 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms