RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	DCBLD2	Q96PD2	775 aa		14.31	□□□□□ -0.12
PICALM-223	ENST00000534412	NUBP1	P53384	320 aa		14.3	□□□□□ -0.12
PICALM-223	ENST00000534412	FAM212A	Q96EL1	285 aa		14.3	□□□□□ -0.12
PICALM-223	ENST00000534412	CCDC61	Q9Y6R9	512 aa		14.29	□□□□□ -0.12
PICALM-223	ENST00000534412	GALR2	O43603	387 aa	Predicted RBP	14.27	□□□□□ -0.13
PICALM-223	ENST00000534412	DCAF8	Q5TAQ9	597 aa		14.22	□□□□□ -0.13
PICALM-223	ENST00000534412	MS4A3	Q96HJ5	214 aa		14.2	□□□□□ -0.14
PICALM-223	ENST00000534412	ABCC9	O60706	1549 aa		14.2	□□□□□ -0.14
PICALM-223	ENST00000534412	KIF12	Q96FN5	646 aa		14.19	□□□□□ -0.14
PICALM-223	ENST00000534412	IFNLR1	Q8IU57	520 aa	Predicted RBP	14.16	□□□□□ -0.14
PICALM-223	ENST00000534412	MAP3K13	O43283	966 aa		14.14	□□□□□ -0.15
PICALM-223	ENST00000534412	POTEI	P0CG38	1075 aa		14.14	□□□□□ -0.15
PICALM-223	ENST00000534412	SPOCK2	Q92563	424 aa		14.14	□□□□□ -0.15
PICALM-223	ENST00000534412	GSE1	Q14687	1217 aa		14.13	□□□□□ -0.15
PICALM-223	ENST00000534412	PCDHB13	Q9Y5F0	798 aa		14.1	□□□□□ -0.15
PICALM-223	ENST00000534412	SGIP1	Q9BQI5	828 aa		14.09	□□□□□ -0.15
PICALM-223	ENST00000534412	PYGB	P11216	843 aa		14.05	□□□□□ -0.16
PICALM-223	ENST00000534412	CIZ1	Q9ULV3	898 aa	Predicted RBP	14.02	□□□□□ -0.17
PICALM-223	ENST00000534412	CCDC180	Q9P1Z9	1646 aa		14.01	□□□□□ -0.17
PICALM-223	ENST00000534412	ASTL	Q6HA08	431 aa	Predicted RBP	14	□□□□□ -0.17
PICALM-223	ENST00000534412	ATMIN	O43313	823 aa	Predicted RBP	13.99	□□□□□ -0.17
PICALM-223	ENST00000534412	TIE1	P35590	1138 aa		13.99	□□□□□ -0.17
PICALM-223	ENST00000534412	LHX8	Q68G74	356 aa		13.97	□□□□□ -0.17
PICALM-223	ENST00000534412	IFNL1	Q8IU54	200 aa		13.97	□□□□□ -0.17
PICALM-223	ENST00000534412	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.95	□□□□□ -0.18
PICALM-223	ENST00000534412	TRPC6	Q9Y210	931 aa		13.95	□□□□□ -0.18
PICALM-223	ENST00000534412	ATN1	P54259	1190 aa	Predicted RBP	13.93	□□□□□ -0.18
PICALM-223	ENST00000534412	PELP1	Q8IZL8	1130 aa	Known RBP	13.92	□□□□□ -0.18
PICALM-223	ENST00000534412	SLC39A7	Q92504	469 aa		13.92	□□□□□ -0.18
PICALM-223	ENST00000534412	CHRM1	P11229	460 aa	Predicted RBP	13.91	□□□□□ -0.18
PICALM-223	ENST00000534412	C7	P10643	843 aa		13.9	□□□□□ -0.18
PICALM-223	ENST00000534412	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.9	□□□□□ -0.18
PICALM-223	ENST00000534412	TTLL13P	A6NNM8	815 aa		13.89	□□□□□ -0.19
PICALM-223	ENST00000534412	METRN	Q9UJH8	293 aa		13.88	□□□□□ -0.19
PICALM-223	ENST00000534412	PCDHB8	Q9UN66	801 aa		13.88	□□□□□ -0.19
PICALM-223	ENST00000534412	TMEM106C	Q9BVX2	250 aa		13.87	□□□□□ -0.19
PICALM-223	ENST00000534412	TRIM41	Q8WV44	630 aa		13.86	□□□□□ -0.19
PICALM-223	ENST00000534412	TRIM35	Q9UPQ4	493 aa		13.82	□□□□□ -0.2
PICALM-223	ENST00000534412	SEC24B	O95487	1268 aa		13.77	□□□□□ -0.21
PICALM-223	ENST00000534412	IER5L	Q5T953	404 aa		13.76	□□□□□ -0.21
PICALM-223	ENST00000534412	PSEN1	P49768	467 aa		13.73	□□□□□ -0.21
PICALM-223	ENST00000534412	GOLGA2	Q08379	1002 aa		13.73	□□□□□ -0.21
PICALM-223	ENST00000534412	PDAP1	Q13442	181 aa	Known RBP	13.72	□□□□□ -0.21
PICALM-223	ENST00000534412	POTEB2	H3BUK9	544 aa		13.69	□□□□□ -0.22
PICALM-223	ENST00000534412	PLCG2	P16885	1265 aa		13.66	□□□□□ -0.22
PICALM-223	ENST00000534412	MKRN3	Q13064	507 aa	Known RBP	13.65	□□□□□ -0.22
PICALM-223	ENST00000534412	MAMSTR	Q6ZN01	415 aa		13.65	□□□□□ -0.22
PICALM-223	ENST00000534412	COLQ	Q9Y215	455 aa	Predicted RBP	13.64	□□□□□ -0.23
PICALM-223	ENST00000534412	POTEF	A5A3E0	1075 aa		13.62	□□□□□ -0.23
PICALM-223	ENST00000534412	RIOK3	O14730	519 aa	Known RBP	13.61	□□□□□ -0.23
PICALM-223	ENST00000534412	SCUBE2	Q9NQ36	999 aa		13.61	□□□□□ -0.23
PICALM-223	ENST00000534412	OTUD5	Q96G74	571 aa		13.6	□□□□□ -0.23
PICALM-223	ENST00000534412	ECM2	O94769	699 aa	Predicted RBP	13.59	□□□□□ -0.23
PICALM-223	ENST00000534412	OCEL1	Q9H607	264 aa		13.59	□□□□□ -0.23
PICALM-223	ENST00000534412	IRX5	P78411	483 aa	Predicted RBP	13.58	□□□□□ -0.24
PICALM-223	ENST00000534412	TAOK2	Q9UL54	1235 aa		13.58	□□□□□ -0.24
PICALM-223	ENST00000534412	CABP2	Q9NPB3	220 aa		13.57	□□□□□ -0.24
PICALM-223	ENST00000534412	VGF	O15240	615 aa	Predicted RBP	13.56	□□□□□ -0.24
PICALM-223	ENST00000534412	POTEJ	P0CG39	1038 aa		13.54	□□□□□ -0.24
PICALM-223	ENST00000534412	RNF25	Q96BH1	459 aa	Predicted RBP	13.54	□□□□□ -0.24
PICALM-223	ENST00000534412	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	3e-7	■■□□□ 13
PICALM-223	ENST00000534412	PKD2	Q13563	968 aa		13.5	□□□□□ -0.25
PICALM-223	ENST00000534412	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.48	□□□□□ -0.25
PICALM-223	ENST00000534412	ZFP91	Q96JP5	570 aa	Predicted RBP	13.48	□□□□□ -0.25
PICALM-223	ENST00000534412	RB1CC1	Q8TDY2	1594 aa		13.44	□□□□□ -0.26
PICALM-223	ENST00000534412	PDCD7	Q8N8D1	485 aa	Known RBP	13.43	□□□□□ -0.26
PICALM-223	ENST00000534412	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.43	□□□□□ -0.26
PICALM-223	ENST00000534412	EFCAB3	Q8N7B9	438 aa		13.42	□□□□□ -0.26
PICALM-223	ENST00000534412		G3V3G9	751 aa		13.4	□□□□□ -0.26
PICALM-223	ENST00000534412	RGL2	O15211	777 aa		13.4	□□□□□ -0.26
PICALM-223	ENST00000534412	STK25	O00506	426 aa		13.38	□□□□□ -0.27
PICALM-223	ENST00000534412	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.38	□□□□□ -0.27
PICALM-223	ENST00000534412	STK24	Q9Y6E0	443 aa		13.38	□□□□□ -0.27
PICALM-223	ENST00000534412	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.37	□□□□□ -0.27
PICALM-223	ENST00000534412	SOX12	O15370	315 aa		13.36	□□□□□ -0.27
PICALM-223	ENST00000534412	C3orf67	Q6ZVT6	689 aa		13.36	□□□□□ -0.27
PICALM-223	ENST00000534412	ILDR1	Q86SU0	546 aa	Predicted RBP	13.36	□□□□□ -0.27
PICALM-223	ENST00000534412	SLAIN1	Q8ND83	568 aa		13.36	□□□□□ -0.27
PICALM-223	ENST00000534412	DPY19L2	Q6NUT2	758 aa		13.31	□□□□□ -0.28
PICALM-223	ENST00000534412	NACAD	O15069	1562 aa		13.31	□□□□□ -0.28
PICALM-223	ENST00000534412	BOLA1	Q9Y3E2	137 aa		13.29	□□□□□ -0.28
PICALM-223	ENST00000534412	NLRP6	P59044	892 aa		13.26	□□□□□ -0.29
PICALM-223	ENST00000534412	PHF8	Q9UPP1	1060 aa		13.26	□□□□□ -0.29
PICALM-223	ENST00000534412	FAM163A	Q96GL9	167 aa	Predicted RBP	13.25	□□□□□ -0.29
PICALM-223	ENST00000534412	SNPH	O15079	494 aa		13.2	□□□□□ -0.3
PICALM-223	ENST00000534412	MS4A4A	Q96JQ5	239 aa		13.17	□□□□□ -0.3
PICALM-223	ENST00000534412	CHGA	P10645	457 aa	Known RBP	13.16	□□□□□ -0.3
PICALM-223	ENST00000534412	HS6ST3	Q8IZP7	471 aa		13.15	□□□□□ -0.3
PICALM-223	ENST00000534412	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.15	□□□□□ -0.3
PICALM-223	ENST00000534412	MFRP	Q9BY79	579 aa		13.15	□□□□□ -0.3
PICALM-223	ENST00000534412	MICALL2	Q8IY33	904 aa		13.14	□□□□□ -0.31
PICALM-223	ENST00000534412	FBXO22	Q8NEZ5	403 aa		13.14	□□□□□ -0.31
PICALM-223	ENST00000534412	POTEM	A6NI47	508 aa		13.12	□□□□□ -0.31
PICALM-223	ENST00000534412	DCAF8L2	P0C7V8	631 aa		13.12	□□□□□ -0.31
PICALM-223	ENST00000534412	MYO15B	Q96JP2	1530 aa		13.12	□□□□□ -0.31
PICALM-223	ENST00000534412	POTEG	Q6S5H5	508 aa		13.1	□□□□□ -0.31
PICALM-223	ENST00000534412	UNC13A	Q9UPW8	1703 aa		13.08	□□□□□ -0.32
PICALM-223	ENST00000534412	BICRA	Q9NZM4	1560 aa		13.07	□□□□□ -0.32
PICALM-223	ENST00000534412	ST18	O60284	1047 aa		13.05	□□□□□ -0.32
PICALM-223	ENST00000534412	LCE2D	Q5TA82	110 aa	Predicted RBP	13.05	□□□□□ -0.32

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