RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 CASC1Q6TDU7 716 aa9.97□□□□□ -0.81
CTNND1-233ENST00000532787 ZCCHC6Q5VYS8 1495 aaKnown RBP9.96□□□□□ -0.81
CTNND1-233ENST00000532787 ARXQ96QS3 562 aa9.96□□□□□ -0.82
CTNND1-233ENST00000532787 CHMP4BQ9H444 224 aaKnown RBP9.95□□□□□ -0.82
CTNND1-233ENST00000532787 CCDC180Q9P1Z9 1646 aa9.95□□□□□ -0.82
CTNND1-233ENST00000532787 SCAF1Q9H7N4 1312 aaKnown RBP9.95□□□□□ -0.82
CTNND1-233ENST00000532787 SCRIBQ14160 1630 aa9.95□□□□□ -0.82
CTNND1-233ENST00000532787 CLIP1P30622 1438 aa9.95□□□□□ -0.82
CTNND1-233ENST00000532787 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-233ENST00000532787 MIER1Q8N108 512 aa9.94□□□□□ -0.82
CTNND1-233ENST00000532787 CFAP53Q96M91 514 aa9.94□□□□□ -0.82
CTNND1-233ENST00000532787 ZRSR1Q15695 479 aaKnown RBP9.93□□□□□ -0.82
CTNND1-233ENST00000532787 GOLGA3Q08378 1498 aa9.92□□□□□ -0.82
CTNND1-233ENST00000532787 PTMAP06454 111 aaKnown RBP9.91□□□□□ -0.82
CTNND1-233ENST00000532787 MS4A1P11836 297 aa9.91□□□□□ -0.82
CTNND1-233ENST00000532787 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.82
CTNND1-233ENST00000532787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.9□□□□□ -0.831e-8■■□□□ 13.5
CTNND1-233ENST00000532787 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.83
CTNND1-233ENST00000532787 GOLGA6L6A8MZA4 724 aa9.9□□□□□ -0.83
CTNND1-233ENST00000532787 KDM2AQ9Y2K7 1162 aa9.88□□□□□ -0.83
CTNND1-233ENST00000532787 CFAP44Q96MT7 982 aa9.88□□□□□ -0.83
CTNND1-233ENST00000532787 NRDCO43847 1150 aa9.86□□□□□ -0.83
CTNND1-233ENST00000532787 KNSTRNQ9Y448 316 aa9.86□□□□□ -0.83
CTNND1-233ENST00000532787 DNTTIP2Q5QJE6 756 aaKnown RBP9.85□□□□□ -0.83
CTNND1-233ENST00000532787 NAP1L5Q96NT1 182 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-233ENST00000532787 FTSJ3Q8IY81 847 aaKnown RBP9.85□□□□□ -0.83
CTNND1-233ENST00000532787 AMER1Q5JTC6 1135 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-233ENST00000532787 NOP58Q9Y2X3 529 aaKnown RBP9.85□□□□□ -0.83
CTNND1-233ENST00000532787 IRX6P78412 446 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-233ENST00000532787 PNNQ9H307 717 aaKnown RBP9.84□□□□□ -0.83
CTNND1-233ENST00000532787 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
CTNND1-233ENST00000532787 L1TD1Q5T7N2 865 aaKnown RBP9.84□□□□□ -0.83
CTNND1-233ENST00000532787 CEP162Q5TB80 1403 aa9.84□□□□□ -0.83
CTNND1-233ENST00000532787 PTMSP20962 102 aa9.83□□□□□ -0.84
CTNND1-233ENST00000532787 TIMELESSQ9UNS1 1208 aa9.83□□□□□ -0.84
CTNND1-233ENST00000532787 NUDCQ9Y266 331 aa9.83□□□□□ -0.84
CTNND1-233ENST00000532787 TNIKQ9UKE5 1360 aa9.81□□□□□ -0.84
CTNND1-233ENST00000532787 CEP164Q9UPV0 1460 aa9.81□□□□□ -0.84
CTNND1-233ENST00000532787 MAPK8IP3Q9UPT6 1336 aa9.81□□□□□ -0.84
CTNND1-233ENST00000532787 PLEKHD1A6NEE1 506 aa9.8□□□□□ -0.84
CTNND1-233ENST00000532787 CHAF1AQ13111 956 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-233ENST00000532787 SUPT16HQ9Y5B9 1047 aaKnown RBP9.79□□□□□ -0.84
CTNND1-233ENST00000532787 PPP1R15AO75807 674 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-233ENST00000532787 HSP90AB1P08238 724 aaKnown RBP9.78□□□□□ -0.84
CTNND1-233ENST00000532787 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-233ENST00000532787 RRP7BPQ9NSQ0 103 aa9.78□□□□□ -0.84
CTNND1-233ENST00000532787 CCER2I3L3R5 266 aa9.78□□□□□ -0.84
CTNND1-233ENST00000532787 CARD11Q9BXL7 1154 aa9.78□□□□□ -0.84
CTNND1-233ENST00000532787 HSCBQ8IWL3 235 aa9.77□□□□□ -0.85
CTNND1-233ENST00000532787 HAP1P54257 671 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-233ENST00000532787 KIF27Q86VH2 1401 aa9.76□□□□□ -0.85
CTNND1-233ENST00000532787 MCCP23508 829 aa9.75□□□□□ -0.85
CTNND1-233ENST00000532787 MSNP26038 577 aaKnown RBP9.74□□□□□ -0.85
CTNND1-233ENST00000532787 WRNQ14191 1432 aaPredicted RBP eCLIP9.73□□□□□ -0.85
CTNND1-233ENST00000532787 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
CTNND1-233ENST00000532787 HIRIP3Q9BW71 556 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-233ENST00000532787 CFDP1Q9UEE9 299 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-233ENST00000532787 ARID4BQ4LE39 1312 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-233ENST00000532787 RB1CC1Q8TDY2 1594 aa9.72□□□□□ -0.85
CTNND1-233ENST00000532787 GOLGA6L4A6NEF3 574 aa9.71□□□□□ -0.85
CTNND1-233ENST00000532787 LAS1LQ9Y4W2 734 aaKnown RBP9.71□□□□□ -0.85
CTNND1-233ENST00000532787 TMF1P82094 1093 aa9.71□□□□□ -0.86
CTNND1-233ENST00000532787 C14orf37Q86TY3 774 aa9.7□□□□□ -0.86
CTNND1-233ENST00000532787 RGS3P49796 1198 aa9.7□□□□□ -0.86
CTNND1-233ENST00000532787 FGD1P98174 961 aa9.69□□□□□ -0.86
CTNND1-233ENST00000532787 GBP4Q96PP9 640 aa9.69□□□□□ -0.86
CTNND1-233ENST00000532787 RGL3Q3MIN7 710 aa9.68□□□□□ -0.86
CTNND1-233ENST00000532787 OS9Q13438 667 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-233ENST00000532787 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
CTNND1-233ENST00000532787 KCNJ4P48050 445 aa9.68□□□□□ -0.86
CTNND1-233ENST00000532787 ZBTB7CA1YPR0 619 aa9.67□□□□□ -0.86
CTNND1-233ENST00000532787 FRAT1Q92837 279 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-233ENST00000532787 KANK1Q14678 1352 aa9.67□□□□□ -0.86
CTNND1-233ENST00000532787 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
CTNND1-233ENST00000532787 HTATSF1O43719 755 aaKnown RBP9.67□□□□□ -0.86
CTNND1-233ENST00000532787 PLPPR3Q6T4P5 718 aa9.67□□□□□ -0.86
CTNND1-233ENST00000532787 TCERG1O14776 1098 aaKnown RBP9.66□□□□□ -0.86
CTNND1-233ENST00000532787 IPO8O15397 1037 aaKnown RBP9.66□□□□□ -0.86
CTNND1-233ENST00000532787 CHMP4AQ9BY43 222 aa9.66□□□□□ -0.86
CTNND1-233ENST00000532787 POGKQ9P215 609 aa9.66□□□□□ -0.86
CTNND1-233ENST00000532787 TNNT3P45378 269 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-233ENST00000532787 CALD1Q05682 793 aaKnown RBP9.66□□□□□ -0.86
CTNND1-233ENST00000532787 SYAP1Q96A49 352 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-233ENST00000532787 DEKP35659 375 aaKnown RBP9.65□□□□□ -0.86
CTNND1-233ENST00000532787 HDGFP51858 240 aaKnown RBP9.65□□□□□ -0.86
CTNND1-233ENST00000532787 KIAA2012Q0VF49 1180 aa9.64□□□□□ -0.87
CTNND1-233ENST00000532787 A0A0G2JS52 829 aa9.64□□□□□ -0.87
CTNND1-233ENST00000532787 BAZ1BQ9UIG0 1483 aaKnown RBP9.64□□□□□ -0.87
CTNND1-233ENST00000532787 MYO15BQ96JP2 1530 aa9.64□□□□□ -0.87
CTNND1-233ENST00000532787 KTN1Q86UP2 1357 aaKnown RBP9.64□□□□□ -0.87
CTNND1-233ENST00000532787 USP35Q9P2H5 1018 aa9.63□□□□□ -0.87
CTNND1-233ENST00000532787 NEUROD2Q15784 382 aa9.63□□□□□ -0.87
CTNND1-233ENST00000532787 NACADO15069 1562 aa9.63□□□□□ -0.87
CTNND1-233ENST00000532787 DRC7Q8IY82 874 aa9.63□□□□□ -0.87
CTNND1-233ENST00000532787 RALBP1Q15311 655 aa9.62□□□□□ -0.87
CTNND1-233ENST00000532787 SETD5Q9C0A6 1442 aa9.62□□□□□ -0.87
CTNND1-233ENST00000532787 B4GALNT3Q6L9W6 998 aa9.62□□□□□ -0.87
CTNND1-233ENST00000532787 KCNH8Q96L42 1107 aa9.62□□□□□ -0.87
CTNND1-233ENST00000532787 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-233ENST00000532787 RWDD1Q9H446 243 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms