RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 CIZ1Q9ULV3 898 aaPredicted RBP14.58□□□□□ -0.08
CHEK1-211ENST00000531062 TSPYL2Q9H2G4 693 aaPredicted RBP14.57□□□□□ -0.08
CHEK1-211ENST00000531062 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
CHEK1-211ENST00000531062 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
CHEK1-211ENST00000531062 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
CHEK1-211ENST00000531062 CHRM1P11229 460 aaPredicted RBP14.53□□□□□ -0.08
CHEK1-211ENST00000531062 EVX2Q03828 476 aa14.51□□□□□ -0.09
CHEK1-211ENST00000531062 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
CHEK1-211ENST00000531062 ZNF579Q8NAF0 562 aaKnown RBP14.47□□□□□ -0.09
CHEK1-211ENST00000531062 ECM2O94769 699 aaPredicted RBP14.44□□□□□ -0.1
CHEK1-211ENST00000531062 PYGBP11216 843 aa14.41□□□□□ -0.1
CHEK1-211ENST00000531062 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
CHEK1-211ENST00000531062 PHF12Q96QT6 1004 aa14.38□□□□□ -0.11
CHEK1-211ENST00000531062 SGIP1Q9BQI5 828 aa14.37□□□□□ -0.11
CHEK1-211ENST00000531062 RGL2O15211 777 aa14.34□□□□□ -0.11
CHEK1-211ENST00000531062 MAP3K13O43283 966 aa14.34□□□□□ -0.11
CHEK1-211ENST00000531062 CLCN6P51797 869 aa14.34□□□□□ -0.11
CHEK1-211ENST00000531062 RNF25Q96BH1 459 aaPredicted RBP14.34□□□□□ -0.11
CHEK1-211ENST00000531062 DCAF8L2P0C7V8 631 aa14.32□□□□□ -0.12
CHEK1-211ENST00000531062 ZNF467Q7Z7K2 595 aaPredicted RBP14.27□□□□□ -0.13
CHEK1-211ENST00000531062 PCDHB13Q9Y5F0 798 aa14.27□□□□□ -0.13
CHEK1-211ENST00000531062 RIOK3O14730 519 aaKnown RBP14.26□□□□□ -0.13
CHEK1-211ENST00000531062 LHX8Q68G74 356 aa14.25□□□□□ -0.13
CHEK1-211ENST00000531062 IFNL1Q8IU54 200 aa14.25□□□□□ -0.13
CHEK1-211ENST00000531062 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
CHEK1-211ENST00000531062 PCDHB8Q9UN66 801 aa14.22□□□□□ -0.13
CHEK1-211ENST00000531062 GABBR2O75899 941 aa14.21□□□□□ -0.13
CHEK1-211ENST00000531062 GALR2O43603 387 aaPredicted RBP14.19□□□□□ -0.14
CHEK1-211ENST00000531062 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
CHEK1-211ENST00000531062 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
CHEK1-211ENST00000531062 PDAP1Q13442 181 aaKnown RBP14.14□□□□□ -0.15
CHEK1-211ENST00000531062 TRPC6Q9Y210 931 aa14.12□□□□□ -0.15
CHEK1-211ENST00000531062 PSEN1P49768 467 aa14.11□□□□□ -0.15
CHEK1-211ENST00000531062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.09□□□□□ -0.15
CHEK1-211ENST00000531062 TIE1P35590 1138 aa14.09□□□□□ -0.15
CHEK1-211ENST00000531062 ZFP91Q96JP5 570 aaPredicted RBP14.09□□□□□ -0.15
CHEK1-211ENST00000531062 PLSCR2Q9NRY7 297 aa14.09□□□□□ -0.15
CHEK1-211ENST00000531062 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
CHEK1-211ENST00000531062 BMP2KQ9NSY1 1161 aaPredicted RBP14.04□□□□□ -0.16
CHEK1-211ENST00000531062 DNAJC5Q9H3Z4 198 aa14.03□□□□□ -0.16
CHEK1-211ENST00000531062 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
CHEK1-211ENST00000531062 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
CHEK1-211ENST00000531062 ASTLQ6HA08 431 aaPredicted RBP14.01□□□□□ -0.17
CHEK1-211ENST00000531062 TMEM106CQ9BVX2 250 aa14.01□□□□□ -0.17
CHEK1-211ENST00000531062 STK25O00506 426 aa14□□□□□ -0.17
CHEK1-211ENST00000531062 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
CHEK1-211ENST00000531062 ATMINO43313 823 aaPredicted RBP13.98□□□□□ -0.17
CHEK1-211ENST00000531062 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
CHEK1-211ENST00000531062 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
CHEK1-211ENST00000531062 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
CHEK1-211ENST00000531062 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
CHEK1-211ENST00000531062 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
CHEK1-211ENST00000531062 CABP2Q9NPB3 220 aa13.9□□□□□ -0.18
CHEK1-211ENST00000531062 TRIM35Q9UPQ4 493 aa13.89□□□□□ -0.19
CHEK1-211ENST00000531062 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
CHEK1-211ENST00000531062 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
CHEK1-211ENST00000531062 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
CHEK1-211ENST00000531062 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
CHEK1-211ENST00000531062 SOX12O15370 315 aa13.84□□□□□ -0.19
CHEK1-211ENST00000531062 IER5LQ5T953 404 aa13.83□□□□□ -0.2
CHEK1-211ENST00000531062 ILDR1Q86SU0 546 aaPredicted RBP13.83□□□□□ -0.2
CHEK1-211ENST00000531062 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
CHEK1-211ENST00000531062 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
CHEK1-211ENST00000531062 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
CHEK1-211ENST00000531062 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
CHEK1-211ENST00000531062 SLC39A7Q92504 469 aa13.77□□□□□ -0.21
CHEK1-211ENST00000531062 C7P10643 843 aa13.76□□□□□ -0.21
CHEK1-211ENST00000531062 IRX5P78411 483 aaPredicted RBP13.76□□□□□ -0.21
CHEK1-211ENST00000531062 GTPBP6O43824 516 aaPredicted RBP13.75□□□□□ -0.21
CHEK1-211ENST00000531062 NLRP6P59044 892 aa13.73□□□□□ -0.21
CHEK1-211ENST00000531062 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
CHEK1-211ENST00000531062 CFAP44Q96MT7 982 aa13.71□□□□□ -0.21
CHEK1-211ENST00000531062 RYDENQ9NUL5 291 aaKnown RBP13.71□□□□□ -0.21
CHEK1-211ENST00000531062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.216e-9■□□□□ 11.1
CHEK1-211ENST00000531062 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
CHEK1-211ENST00000531062 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
CHEK1-211ENST00000531062 PDCD7Q8N8D1 485 aaKnown RBP13.7□□□□□ -0.22
CHEK1-211ENST00000531062 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
CHEK1-211ENST00000531062 OCEL1Q9H607 264 aa13.7□□□□□ -0.22
CHEK1-211ENST00000531062 SPRYD3Q8NCJ5 442 aa13.69□□□□□ -0.22
CHEK1-211ENST00000531062 METRNQ9UJH8 293 aa13.69□□□□□ -0.22
CHEK1-211ENST00000531062 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
CHEK1-211ENST00000531062 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
CHEK1-211ENST00000531062 PLCG2P16885 1265 aa13.62□□□□□ -0.23
CHEK1-211ENST00000531062 SEC24BO95487 1268 aa13.61□□□□□ -0.23
CHEK1-211ENST00000531062 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
CHEK1-211ENST00000531062 PPP1R37O75864 691 aa13.59□□□□□ -0.23
CHEK1-211ENST00000531062 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
CHEK1-211ENST00000531062 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
CHEK1-211ENST00000531062 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
CHEK1-211ENST00000531062 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
CHEK1-211ENST00000531062 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
CHEK1-211ENST00000531062 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
CHEK1-211ENST00000531062 POTEMA6NI47 508 aa13.47□□□□□ -0.25
CHEK1-211ENST00000531062 POTEJP0CG39 1038 aa13.47□□□□□ -0.25
CHEK1-211ENST00000531062 MICALL2Q8IY33 904 aa13.47□□□□□ -0.25
CHEK1-211ENST00000531062 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
CHEK1-211ENST00000531062 OTUD5Q96G74 571 aa13.42□□□□□ -0.26
CHEK1-211ENST00000531062 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
CHEK1-211ENST00000531062 G3V3G9 751 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms