RNA–Protein interactions for RNA: ENST00000527345.1

AP002428.1-201, humanhuman

TSL 3 BASIC

Gene AP002428.1, Length 380 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002428.1-201ENST00000527345 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
AP002428.1-201ENST00000527345 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
AP002428.1-201ENST00000527345 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
AP002428.1-201ENST00000527345 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
AP002428.1-201ENST00000527345 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
AP002428.1-201ENST00000527345 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
AP002428.1-201ENST00000527345 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
AP002428.1-201ENST00000527345 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
AP002428.1-201ENST00000527345 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
AP002428.1-201ENST00000527345 MAP3K13O43283 966 aa12.23□□□□□ -0.45
AP002428.1-201ENST00000527345 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
AP002428.1-201ENST00000527345 GSE1Q14687 1217 aa12.2□□□□□ -0.46
AP002428.1-201ENST00000527345 SGIP1Q9BQI5 828 aa12.19□□□□□ -0.46
AP002428.1-201ENST00000527345 PCDHB13Q9Y5F0 798 aa12.16□□□□□ -0.46
AP002428.1-201ENST00000527345 PYGBP11216 843 aa12.14□□□□□ -0.47
AP002428.1-201ENST00000527345 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
AP002428.1-201ENST00000527345 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
AP002428.1-201ENST00000527345 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
AP002428.1-201ENST00000527345 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
AP002428.1-201ENST00000527345 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
AP002428.1-201ENST00000527345 TIE1P35590 1138 aa12.08□□□□□ -0.48
AP002428.1-201ENST00000527345 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
AP002428.1-201ENST00000527345 PELP1Q8IZL8 1130 aaKnown RBP12.07□□□□□ -0.48
AP002428.1-201ENST00000527345 BMP2KQ9NSY1 1161 aaPredicted RBP12.06□□□□□ -0.48
AP002428.1-201ENST00000527345 LHX8Q68G74 356 aa12.05□□□□□ -0.48
AP002428.1-201ENST00000527345 ATN1P54259 1190 aaPredicted RBP12.04□□□□□ -0.48
AP002428.1-201ENST00000527345 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
AP002428.1-201ENST00000527345 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
AP002428.1-201ENST00000527345 PCDHB8Q9UN66 801 aa12.01□□□□□ -0.49
AP002428.1-201ENST00000527345 C7P10643 843 aa12□□□□□ -0.49
AP002428.1-201ENST00000527345 ZNF467Q7Z7K2 595 aaPredicted RBP11.99□□□□□ -0.49
AP002428.1-201ENST00000527345 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
AP002428.1-201ENST00000527345 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
AP002428.1-201ENST00000527345 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
AP002428.1-201ENST00000527345 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
AP002428.1-201ENST00000527345 POTEB2H3BUK9 544 aa11.88□□□□□ -0.51
AP002428.1-201ENST00000527345 IER5LQ5T953 404 aa11.88□□□□□ -0.51
AP002428.1-201ENST00000527345 PSEN1P49768 467 aa11.87□□□□□ -0.51
AP002428.1-201ENST00000527345 SEC24BO95487 1268 aa11.86□□□□□ -0.51
AP002428.1-201ENST00000527345 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
AP002428.1-201ENST00000527345 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
AP002428.1-201ENST00000527345 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
AP002428.1-201ENST00000527345 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
AP002428.1-201ENST00000527345 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
AP002428.1-201ENST00000527345 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
AP002428.1-201ENST00000527345 PLCG2P16885 1265 aa11.76□□□□□ -0.53
AP002428.1-201ENST00000527345 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
AP002428.1-201ENST00000527345 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
AP002428.1-201ENST00000527345 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
AP002428.1-201ENST00000527345 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
AP002428.1-201ENST00000527345 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
AP002428.1-201ENST00000527345 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
AP002428.1-201ENST00000527345 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
AP002428.1-201ENST00000527345 PKD2Q13563 968 aa11.74□□□□□ -0.53
AP002428.1-201ENST00000527345 VGFO15240 615 aaPredicted RBP11.71□□□□□ -0.53
AP002428.1-201ENST00000527345 CABP2Q9NPB3 220 aa11.71□□□□□ -0.53
AP002428.1-201ENST00000527345 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
AP002428.1-201ENST00000527345 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
AP002428.1-201ENST00000527345 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
AP002428.1-201ENST00000527345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
AP002428.1-201ENST00000527345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
AP002428.1-201ENST00000527345 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
AP002428.1-201ENST00000527345 RGL2O15211 777 aa11.63□□□□□ -0.55
AP002428.1-201ENST00000527345 PDCD7Q8N8D1 485 aaKnown RBP11.63□□□□□ -0.55
AP002428.1-201ENST00000527345 ILDR1Q86SU0 546 aaPredicted RBP11.61□□□□□ -0.55
AP002428.1-201ENST00000527345 EFCAB3Q8N7B9 438 aa11.61□□□□□ -0.55
AP002428.1-201ENST00000527345 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
AP002428.1-201ENST00000527345 L3MBTL3Q96JM7 780 aaPredicted RBP11.59□□□□□ -0.55
AP002428.1-201ENST00000527345 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
AP002428.1-201ENST00000527345 SOX12O15370 315 aa11.56□□□□□ -0.56
AP002428.1-201ENST00000527345 STK24Q9Y6E0 443 aa11.56□□□□□ -0.56
AP002428.1-201ENST00000527345 STK25O00506 426 aa11.55□□□□□ -0.56
AP002428.1-201ENST00000527345 DCAF8L2P0C7V8 631 aa11.55□□□□□ -0.56
AP002428.1-201ENST00000527345 DPY19L2Q6NUT2 758 aa11.54□□□□□ -0.56
AP002428.1-201ENST00000527345 SLAIN1Q8ND83 568 aa11.52□□□□□ -0.57
AP002428.1-201ENST00000527345 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
AP002428.1-201ENST00000527345 G3V3G9 751 aa11.49□□□□□ -0.57
AP002428.1-201ENST00000527345 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
AP002428.1-201ENST00000527345 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
AP002428.1-201ENST00000527345 PHF8Q9UPP1 1060 aa11.47□□□□□ -0.57
AP002428.1-201ENST00000527345 NLRP6P59044 892 aa11.45□□□□□ -0.58
AP002428.1-201ENST00000527345 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
AP002428.1-201ENST00000527345 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
AP002428.1-201ENST00000527345 FBXO22Q8NEZ5 403 aa11.4□□□□□ -0.58
AP002428.1-201ENST00000527345 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
AP002428.1-201ENST00000527345 MFRPQ9BY79 579 aa11.4□□□□□ -0.58
AP002428.1-201ENST00000527345 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
AP002428.1-201ENST00000527345 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
AP002428.1-201ENST00000527345 SNPHO15079 494 aa11.36□□□□□ -0.59
AP002428.1-201ENST00000527345 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
AP002428.1-201ENST00000527345 LCE2DQ5TA82 110 aaPredicted RBP11.32□□□□□ -0.6
AP002428.1-201ENST00000527345 POTEMA6NI47 508 aa11.3□□□□□ -0.6
AP002428.1-201ENST00000527345 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
AP002428.1-201ENST00000527345 ST18O60284 1047 aa11.28□□□□□ -0.6
AP002428.1-201ENST00000527345 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
AP002428.1-201ENST00000527345 TMEM92Q6UXU6 159 aa11.24□□□□□ -0.61
AP002428.1-201ENST00000527345 PPP1R37O75864 691 aa11.23□□□□□ -0.61
AP002428.1-201ENST00000527345 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
AP002428.1-201ENST00000527345 PLSCR2Q9NRY7 297 aa11.2□□□□□ -0.62
AP002428.1-201ENST00000527345 RYDENQ9NUL5 291 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms