RNA–Protein interactions for RNA: ENST00000526202.5

LMO7-218, Transcript of LIM domain 7, humanhuman

TSL 2 BASIC

Gene LMO7, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-218ENST00000526202 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
LMO7-218ENST00000526202 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
LMO7-218ENST00000526202 IPO9Q96P70 1041 aaKnown RBP12.26□□□□□ -0.45
LMO7-218ENST00000526202 TNNT2P45379 298 aaPredicted RBP12.25□□□□□ -0.45
LMO7-218ENST00000526202 KCNH8Q96L42 1107 aa12.21□□□□□ -0.45
LMO7-218ENST00000526202 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
LMO7-218ENST00000526202 CDK11BP21127 795 aaKnown RBP12.2□□□□□ -0.46
LMO7-218ENST00000526202 POLR3GLQ9BT43 218 aa12.19□□□□□ -0.46
LMO7-218ENST00000526202 GSE1Q14687 1217 aa12.18□□□□□ -0.46
LMO7-218ENST00000526202 USP35Q9P2H5 1018 aa12.18□□□□□ -0.46
LMO7-218ENST00000526202 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
LMO7-218ENST00000526202 FAM9BQ8IZU0 186 aa12.17□□□□□ -0.46
LMO7-218ENST00000526202 TRIM44Q96DX7 344 aaPredicted RBP12.17□□□□□ -0.46
LMO7-218ENST00000526202 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
LMO7-218ENST00000526202 SCRIBQ14160 1630 aa12.15□□□□□ -0.46
LMO7-218ENST00000526202 ARID3AQ99856 593 aa12.14□□□□□ -0.47
LMO7-218ENST00000526202 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
LMO7-218ENST00000526202 ANP32BQ92688 251 aaKnown RBP12.13□□□□□ -0.47
LMO7-218ENST00000526202 RBM10P98175 930 aaKnown RBP12.07□□□□□ -0.48
LMO7-218ENST00000526202 PDIA4P13667 645 aaKnown RBP12.07□□□□□ -0.48
LMO7-218ENST00000526202 L1TD1Q5T7N2 865 aaKnown RBP12.06□□□□□ -0.48
LMO7-218ENST00000526202 RRP9O43818 475 aaKnown RBP12.04□□□□□ -0.48
LMO7-218ENST00000526202 FAM43AQ8N2R8 423 aa12.04□□□□□ -0.48
LMO7-218ENST00000526202 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
LMO7-218ENST00000526202 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
LMO7-218ENST00000526202 MRS2Q9HD23 443 aa12□□□□□ -0.49
LMO7-218ENST00000526202 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
LMO7-218ENST00000526202 ZNF326Q5BKZ1 582 aaKnown RBP11.98□□□□□ -0.49
LMO7-218ENST00000526202 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
LMO7-218ENST00000526202 CCER2I3L3R5 266 aa11.96□□□□□ -0.49
LMO7-218ENST00000526202 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
LMO7-218ENST00000526202 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
LMO7-218ENST00000526202 NFKBIBQ15653 356 aa11.93□□□□□ -0.5
LMO7-218ENST00000526202 GZF1Q9H116 711 aaPredicted RBP11.93□□□□□ -0.5
LMO7-218ENST00000526202 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
LMO7-218ENST00000526202 BECN1Q14457 450 aa11.91□□□□□ -0.5
LMO7-218ENST00000526202 UPF2Q9HAU5 1272 aaKnown RBP11.9□□□□□ -0.5
LMO7-218ENST00000526202 FAM13BQ9NYF5 915 aa11.9□□□□□ -0.5
LMO7-218ENST00000526202 FGD1P98174 961 aa11.9□□□□□ -0.5
LMO7-218ENST00000526202 GOLGA6L3A6NEY3 463 aa11.89□□□□□ -0.51
LMO7-218ENST00000526202 SIN3AQ96ST3 1273 aa11.89□□□□□ -0.51
LMO7-218ENST00000526202 MSNP26038 577 aaKnown RBP11.88□□□□□ -0.51
LMO7-218ENST00000526202 DNTTIP2Q5QJE6 756 aaKnown RBP11.88□□□□□ -0.51
LMO7-218ENST00000526202 C11orf95C9JLR9 678 aaPredicted RBP11.87□□□□□ -0.51
LMO7-218ENST00000526202 TCERG1O14776 1098 aaKnown RBP11.87□□□□□ -0.51
LMO7-218ENST00000526202 RGS3P49796 1198 aa11.87□□□□□ -0.51
LMO7-218ENST00000526202 FAM50AQ14320 339 aaKnown RBP11.86□□□□□ -0.51
LMO7-218ENST00000526202 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
LMO7-218ENST00000526202 PDE4AP27815 886 aa11.85□□□□□ -0.51
LMO7-218ENST00000526202 AAMPQ13685 434 aa11.84□□□□□ -0.51
LMO7-218ENST00000526202 SLKQ9H2G2 1235 aaPredicted RBP11.84□□□□□ -0.51
LMO7-218ENST00000526202 TAF7LQ5H9L4 462 aa11.84□□□□□ -0.51
LMO7-218ENST00000526202 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
LMO7-218ENST00000526202 CECR2Q9BXF3 1484 aa11.8□□□□□ -0.52
LMO7-218ENST00000526202 ZHX1Q9UKY1 873 aaPredicted RBP11.8□□□□□ -0.52
LMO7-218ENST00000526202 TONSLQ96HA7 1378 aa11.8□□□□□ -0.52
LMO7-218ENST00000526202 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
LMO7-218ENST00000526202 FRAT2O75474 233 aaPredicted RBP11.79□□□□□ -0.52
LMO7-218ENST00000526202 TPM2P07951 284 aa11.79□□□□□ -0.52
LMO7-218ENST00000526202 NAP1L2Q9ULW6 460 aaPredicted RBP11.79□□□□□ -0.52
LMO7-218ENST00000526202 ZBTB7CA1YPR0 619 aa11.78□□□□□ -0.52
LMO7-218ENST00000526202 CHMP4BQ9H444 224 aaKnown RBP11.78□□□□□ -0.52
LMO7-218ENST00000526202 PTMAP06454 111 aaKnown RBP11.77□□□□□ -0.52
LMO7-218ENST00000526202 PDCL3Q9H2J4 239 aa11.77□□□□□ -0.52
LMO7-218ENST00000526202 CEP162Q5TB80 1403 aa11.77□□□□□ -0.53
LMO7-218ENST00000526202 TNNT3P45378 269 aaPredicted RBP11.77□□□□□ -0.53
LMO7-218ENST00000526202 TMC1Q8TDI8 760 aa11.76□□□□□ -0.53
LMO7-218ENST00000526202 WASHC2AQ641Q2 1341 aa11.76□□□□□ -0.53
LMO7-218ENST00000526202 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
LMO7-218ENST00000526202 MAP7D2Q96T17 732 aa11.76□□□□□ -0.53
LMO7-218ENST00000526202 RSF1Q96T23 1441 aaPredicted RBP11.76□□□□□ -0.53
LMO7-218ENST00000526202 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
LMO7-218ENST00000526202 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
LMO7-218ENST00000526202 PRDM10Q9NQV6 1147 aa11.74□□□□□ -0.53
LMO7-218ENST00000526202 NACADO15069 1562 aa11.74□□□□□ -0.53
LMO7-218ENST00000526202 WASHC2CQ9Y4E1 1318 aa11.74□□□□□ -0.53
LMO7-218ENST00000526202 APPP05067 770 aa11.74□□□□□ -0.53
LMO7-218ENST00000526202 BAZ1BQ9UIG0 1483 aaKnown RBP11.73□□□□□ -0.53
LMO7-218ENST00000526202 EEA1Q15075 1411 aa11.71□□□□□ -0.53
LMO7-218ENST00000526202 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
LMO7-218ENST00000526202 ZNF771Q7L3S4 317 aaPredicted RBP11.7□□□□□ -0.54
LMO7-218ENST00000526202 GOLGA6L22H0YM25 854 aa11.69□□□□□ -0.54
LMO7-218ENST00000526202 R3HCC1Q9Y3T6 440 aaKnown RBP11.69□□□□□ -0.54
LMO7-218ENST00000526202 AEBP2Q6ZN18 517 aaPredicted RBP11.68□□□□□ -0.54
LMO7-218ENST00000526202 ESPNB1AK53 854 aa11.67□□□□□ -0.54
LMO7-218ENST00000526202 CALD1Q05682 793 aaKnown RBP11.67□□□□□ -0.54
LMO7-218ENST00000526202 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.67□□□□□ -0.54
LMO7-218ENST00000526202 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.66□□□□□ -0.54
LMO7-218ENST00000526202 RRAGDQ9NQL2 400 aaPredicted RBP11.66□□□□□ -0.54
LMO7-218ENST00000526202 MTERF4Q7Z6M4 381 aaKnown RBP11.65□□□□□ -0.54
LMO7-218ENST00000526202 POGKQ9P215 609 aa11.64□□□□□ -0.55
LMO7-218ENST00000526202 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
LMO7-218ENST00000526202 MS4A1P11836 297 aa11.64□□□□□ -0.55
LMO7-218ENST00000526202 PTMSP20962 102 aa11.63□□□□□ -0.55
LMO7-218ENST00000526202 AEBP1Q8IUX7 1158 aa11.63□□□□□ -0.55
LMO7-218ENST00000526202 CLCN1P35523 988 aa11.62□□□□□ -0.55
LMO7-218ENST00000526202 VGLL3A8MV65 326 aa11.62□□□□□ -0.55
LMO7-218ENST00000526202 HAP1P54257 671 aaPredicted RBP11.62□□□□□ -0.55
LMO7-218ENST00000526202 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.55
LMO7-218ENST00000526202 E9PSI1 815 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms