RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 UPF2Q9HAU5 1272 aaKnown RBP14.11□□□□□ -0.15
CTSC-203ENST00000524463 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
CTSC-203ENST00000524463 RGL3Q3MIN7 710 aa14.09□□□□□ -0.15
CTSC-203ENST00000524463 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
CTSC-203ENST00000524463 TRHP20396 242 aaPredicted RBP14.06□□□□□ -0.16
CTSC-203ENST00000524463 NPHP1O15259 732 aa14.06□□□□□ -0.16
CTSC-203ENST00000524463 TSPY4P0CV99 314 aa14.06□□□□□ -0.16
CTSC-203ENST00000524463 TSPY10P0CW01 314 aa14.06□□□□□ -0.16
CTSC-203ENST00000524463 CDK11BP21127 795 aaKnown RBP14.05□□□□□ -0.16
CTSC-203ENST00000524463 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
CTSC-203ENST00000524463 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.16
CTSC-203ENST00000524463 CCDC136Q96JN2 1154 aa14.02□□□□□ -0.16
CTSC-203ENST00000524463 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.01□□□□□ -0.17
CTSC-203ENST00000524463 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
CTSC-203ENST00000524463 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
CTSC-203ENST00000524463 MLECQ14165 292 aa13.98□□□□□ -0.17
CTSC-203ENST00000524463 SOX12O15370 315 aa13.98□□□□□ -0.17
CTSC-203ENST00000524463 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
CTSC-203ENST00000524463 NEUROD2Q15784 382 aa13.97□□□□□ -0.17
CTSC-203ENST00000524463 ACIN1Q9UKV3 1341 aaKnown RBP13.97□□□□□ -0.17
CTSC-203ENST00000524463 MTUS2Q5JR59 1369 aa13.95□□□□□ -0.18
CTSC-203ENST00000524463 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
CTSC-203ENST00000524463 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
CTSC-203ENST00000524463 POGKQ9P215 609 aa13.85□□□□□ -0.19
CTSC-203ENST00000524463 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTSC-203ENST00000524463 PLEKHD1A6NEE1 506 aa13.84□□□□□ -0.19
CTSC-203ENST00000524463 NAP1L2Q9ULW6 460 aaPredicted RBP13.84□□□□□ -0.19
CTSC-203ENST00000524463 CLSTN1O94985 981 aa13.82□□□□□ -0.2
CTSC-203ENST00000524463 ISY1Q9ULR0 285 aaKnown RBP13.81□□□□□ -0.2
CTSC-203ENST00000524463 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
CTSC-203ENST00000524463 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
CTSC-203ENST00000524463 FTSJ3Q8IY81 847 aaKnown RBP13.79□□□□□ -0.2
CTSC-203ENST00000524463 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
CTSC-203ENST00000524463 FRAT1Q92837 279 aaPredicted RBP13.78□□□□□ -0.2
CTSC-203ENST00000524463 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.2
CTSC-203ENST00000524463 GOLGA2Q08379 1002 aa13.77□□□□□ -0.21
CTSC-203ENST00000524463 KNSTRNQ9Y448 316 aa13.77□□□□□ -0.21
CTSC-203ENST00000524463 MIER1Q8N108 512 aa13.77□□□□□ -0.21
CTSC-203ENST00000524463 CFAP53Q96M91 514 aa13.77□□□□□ -0.21
CTSC-203ENST00000524463 ZNF330Q9Y3S2 320 aaPredicted RBP13.76□□□□□ -0.21
CTSC-203ENST00000524463 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
CTSC-203ENST00000524463 ZRSR1Q15695 479 aaKnown RBP13.75□□□□□ -0.21
CTSC-203ENST00000524463 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
CTSC-203ENST00000524463 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
CTSC-203ENST00000524463 MAPK8IP3Q9UPT6 1336 aa13.74□□□□□ -0.21
CTSC-203ENST00000524463 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
CTSC-203ENST00000524463 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
CTSC-203ENST00000524463 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
CTSC-203ENST00000524463 STK26Q9P289 416 aa13.72□□□□□ -0.21
CTSC-203ENST00000524463 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
CTSC-203ENST00000524463 RGS3P49796 1198 aa13.71□□□□□ -0.22
CTSC-203ENST00000524463 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
CTSC-203ENST00000524463 PTMAP06454 111 aaKnown RBP13.7□□□□□ -0.22
CTSC-203ENST00000524463 FGD1P98174 961 aa13.7□□□□□ -0.22
CTSC-203ENST00000524463 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
CTSC-203ENST00000524463 KCNJ4P48050 445 aa13.67□□□□□ -0.22
CTSC-203ENST00000524463 APBB1O00213 710 aa13.67□□□□□ -0.22
CTSC-203ENST00000524463 SRPK2P78362 688 aaKnown RBP13.66□□□□□ -0.22
CTSC-203ENST00000524463 BECN1Q14457 450 aa13.65□□□□□ -0.22
CTSC-203ENST00000524463 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
CTSC-203ENST00000524463 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
CTSC-203ENST00000524463 DNTTIP2Q5QJE6 756 aaKnown RBP13.65□□□□□ -0.22
CTSC-203ENST00000524463 CLIP1P30622 1438 aa13.65□□□□□ -0.22
CTSC-203ENST00000524463 GGT6Q6P531 493 aa13.64□□□□□ -0.23
CTSC-203ENST00000524463 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
CTSC-203ENST00000524463 CSB-PGBD3P0DP91 1061 aa13.63□□□□□ -0.23
CTSC-203ENST00000524463 SUPT16HQ9Y5B9 1047 aaKnown RBP13.62□□□□□ -0.23
CTSC-203ENST00000524463 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
CTSC-203ENST00000524463 NUDCQ9Y266 331 aa13.62□□□□□ -0.23
CTSC-203ENST00000524463 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
CTSC-203ENST00000524463 GOLGA6L22H0YM25 854 aa13.62□□□□□ -0.23
CTSC-203ENST00000524463 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
CTSC-203ENST00000524463 DCAF11Q8TEB1 546 aa13.59□□□□□ -0.23
CTSC-203ENST00000524463 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
CTSC-203ENST00000524463 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
CTSC-203ENST00000524463 PDE4CQ08493 712 aa13.56□□□□□ -0.24
CTSC-203ENST00000524463 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
CTSC-203ENST00000524463 HSP90AB1P08238 724 aaKnown RBP13.56□□□□□ -0.24
CTSC-203ENST00000524463 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
CTSC-203ENST00000524463 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
CTSC-203ENST00000524463 FOXD1Q16676 465 aa13.54□□□□□ -0.24
CTSC-203ENST00000524463 GLIPR1L2Q4G1C9 344 aa13.54□□□□□ -0.24
CTSC-203ENST00000524463 ERICH6BQ5W0A0 696 aa13.52□□□□□ -0.24
CTSC-203ENST00000524463 CHMP3Q9Y3E7 222 aa13.52□□□□□ -0.24
CTSC-203ENST00000524463 RTF1Q92541 710 aaKnown RBP13.52□□□□□ -0.25
CTSC-203ENST00000524463 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
CTSC-203ENST00000524463 PRM3Q9NNZ6 103 aa13.5□□□□□ -0.25
CTSC-203ENST00000524463 LTV1Q96GA3 475 aaPredicted RBP13.49□□□□□ -0.25
CTSC-203ENST00000524463 GNL2Q13823 731 aaKnown RBP13.48□□□□□ -0.25
CTSC-203ENST00000524463 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
CTSC-203ENST00000524463 G3V3G9 751 aa13.47□□□□□ -0.25
CTSC-203ENST00000524463 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
CTSC-203ENST00000524463 CCNB3Q8WWL7 1395 aa13.47□□□□□ -0.25
CTSC-203ENST00000524463 KANK1Q14678 1352 aa13.47□□□□□ -0.25
CTSC-203ENST00000524463 GOLGA6L4A6NEF3 574 aa13.46□□□□□ -0.25
CTSC-203ENST00000524463 MSH5O43196 834 aa13.45□□□□□ -0.26
CTSC-203ENST00000524463 TMF1P82094 1093 aa13.45□□□□□ -0.26
CTSC-203ENST00000524463 TMX4Q9H1E5 349 aaPredicted RBP13.45□□□□□ -0.26
CTSC-203ENST00000524463 NAP1L5Q96NT1 182 aaPredicted RBP13.45□□□□□ -0.26
CTSC-203ENST00000524463 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms