RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 METRNQ9UJH8 293 aa15.83■□□□□ 0.12
PCM1-223ENST00000524356 ATMINO43313 823 aaPredicted RBP15.8■□□□□ 0.12
PCM1-223ENST00000524356 SLC39A7Q92504 469 aa15.75■□□□□ 0.11
PCM1-223ENST00000524356 C7P10643 843 aa15.74■□□□□ 0.11
PCM1-223ENST00000524356 LCE2DQ5TA82 110 aaPredicted RBP15.66■□□□□ 0.1
PCM1-223ENST00000524356 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
PCM1-223ENST00000524356 ATN1P54259 1190 aaPredicted RBP15.64■□□□□ 0.09
PCM1-223ENST00000524356 CCDC61Q9Y6R9 512 aa15.64■□□□□ 0.09
PCM1-223ENST00000524356 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
PCM1-223ENST00000524356 MAMSTRQ6ZN01 415 aa15.62■□□□□ 0.09
PCM1-223ENST00000524356 PCDH10Q9P2E7 1040 aa15.61■□□□□ 0.09
PCM1-223ENST00000524356 PROM2Q8N271 834 aa15.58■□□□□ 0.08
PCM1-223ENST00000524356 POTEFA5A3E0 1075 aa15.57■□□□□ 0.08
PCM1-223ENST00000524356 KIF12Q96FN5 646 aa15.57■□□□□ 0.08
PCM1-223ENST00000524356 TRPC6Q9Y210 931 aa15.56■□□□□ 0.08
PCM1-223ENST00000524356 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
PCM1-223ENST00000524356 FAM163AQ96GL9 167 aaPredicted RBP15.52■□□□□ 0.08
PCM1-223ENST00000524356 SCUBE2Q9NQ36 999 aa15.52■□□□□ 0.08
PCM1-223ENST00000524356 MAP3K13O43283 966 aa15.45■□□□□ 0.06
PCM1-223ENST00000524356 TIE1P35590 1138 aa15.42■□□□□ 0.06
PCM1-223ENST00000524356 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
PCM1-223ENST00000524356 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
PCM1-223ENST00000524356 TTLL13PA6NNM8 815 aa15.35■□□□□ 0.05
PCM1-223ENST00000524356 MIER1Q8N108 512 aa15.3■□□□□ 0.04
PCM1-223ENST00000524356 SEC24BO95487 1268 aa15.28■□□□□ 0.04
PCM1-223ENST00000524356 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
PCM1-223ENST00000524356 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
PCM1-223ENST00000524356 IER5LQ5T953 404 aa15.21■□□□□ 0.03
PCM1-223ENST00000524356 CDAN1Q8IWY9 1227 aa15.21■□□□□ 0.03
PCM1-223ENST00000524356 PCDHB13Q9Y5F0 798 aa15.2■□□□□ 0.02
PCM1-223ENST00000524356 SGIP1Q9BQI5 828 aa15.18■□□□□ 0.02
PCM1-223ENST00000524356 NUBP1P53384 320 aa15.13■□□□□ 0.01
PCM1-223ENST00000524356 IFNL1Q8IU54 200 aa15.13■□□□□ 0.01
PCM1-223ENST00000524356 ST18O60284 1047 aa15.12■□□□□ 0.01
PCM1-223ENST00000524356 SLAIN1Q8ND83 568 aa15.12■□□□□ 0.01
PCM1-223ENST00000524356 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
PCM1-223ENST00000524356 TMEM106CQ9BVX2 250 aa15.06■□□□□ 0
PCM1-223ENST00000524356 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
PCM1-223ENST00000524356 PLCG2P16885 1265 aa15.01□□□□□ -0.01
PCM1-223ENST00000524356 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
PCM1-223ENST00000524356 FAM212AQ96EL1 285 aa14.97□□□□□ -0.01
PCM1-223ENST00000524356 MMRN1Q13201 1228 aa14.89□□□□□ -0.03
PCM1-223ENST00000524356 OCEL1Q9H607 264 aa14.88□□□□□ -0.03
PCM1-223ENST00000524356 SPNS2Q8IVW8 549 aa14.87□□□□□ -0.03
PCM1-223ENST00000524356 TMEM121BQ9BXQ6 578 aaPredicted RBP14.87□□□□□ -0.03
PCM1-223ENST00000524356 PYGBP11216 843 aa14.82□□□□□ -0.04
PCM1-223ENST00000524356 MARVELD3Q96A59 401 aa14.82□□□□□ -0.04
PCM1-223ENST00000524356 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.81□□□□□ -0.04
PCM1-223ENST00000524356 PCDHB8Q9UN66 801 aa14.8□□□□□ -0.04
PCM1-223ENST00000524356 SNPHO15079 494 aa14.78□□□□□ -0.04
PCM1-223ENST00000524356 DCAF8Q5TAQ9 597 aa14.76□□□□□ -0.05
PCM1-223ENST00000524356 PDCD7Q8N8D1 485 aaKnown RBP14.73□□□□□ -0.05
PCM1-223ENST00000524356 FKBP8Q14318 412 aa14.65□□□□□ -0.06
PCM1-223ENST00000524356 POTEB3A0JP26 581 aa14.63□□□□□ -0.07
PCM1-223ENST00000524356 EMP3P54852 163 aa14.63□□□□□ -0.07
PCM1-223ENST00000524356 POTEBQ6S5H4 581 aa14.63□□□□□ -0.07
PCM1-223ENST00000524356 C3orf67Q6ZVT6 689 aa14.62□□□□□ -0.07
PCM1-223ENST00000524356 KRTAP3-3Q9BYR6 98 aa14.61□□□□□ -0.07
PCM1-223ENST00000524356 KRTAP3-2Q9BYR7 98 aa14.61□□□□□ -0.07
PCM1-223ENST00000524356 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
PCM1-223ENST00000524356 HS3ST6Q96QI5 342 aa14.57□□□□□ -0.08
PCM1-223ENST00000524356 MKRN3Q13064 507 aaKnown RBP14.56□□□□□ -0.08
PCM1-223ENST00000524356 ZNF467Q7Z7K2 595 aaPredicted RBP14.55□□□□□ -0.08
PCM1-223ENST00000524356 FAM205CA6NFA0 338 aa14.53□□□□□ -0.08
PCM1-223ENST00000524356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.081e-13■■■■□ 22.6
PCM1-223ENST00000524356 GOLGA2Q08379 1002 aa14.52□□□□□ -0.09
PCM1-223ENST00000524356 PSEN1P49768 467 aa14.48□□□□□ -0.09
PCM1-223ENST00000524356 GSE1Q14687 1217 aa14.48□□□□□ -0.09
PCM1-223ENST00000524356 ILDR1Q86SU0 546 aaPredicted RBP14.48□□□□□ -0.09
PCM1-223ENST00000524356 CHRM1P11229 460 aaPredicted RBP14.46□□□□□ -0.09
PCM1-223ENST00000524356 DPY19L2Q6NUT2 758 aa14.45□□□□□ -0.1
PCM1-223ENST00000524356 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
PCM1-223ENST00000524356 HOXB3P14651 431 aaPredicted RBP14.4□□□□□ -0.1
PCM1-223ENST00000524356 KLHL34Q8N239 644 aa14.4□□□□□ -0.1
PCM1-223ENST00000524356 VASPP50552 380 aaPredicted RBP14.37□□□□□ -0.11
PCM1-223ENST00000524356 PDAP1Q13442 181 aaKnown RBP14.35□□□□□ -0.11
PCM1-223ENST00000524356 BOLA1Q9Y3E2 137 aa14.33□□□□□ -0.12
PCM1-223ENST00000524356 CABP2Q9NPB3 220 aa14.31□□□□□ -0.12
PCM1-223ENST00000524356 HOXB1P14653 301 aaPredicted RBP14.3□□□□□ -0.12
PCM1-223ENST00000524356 G3V3G9 751 aa14.24□□□□□ -0.13
PCM1-223ENST00000524356 ZNF710Q8N1W2 664 aa14.24□□□□□ -0.13
PCM1-223ENST00000524356 ERBB3P21860 1342 aa14.22□□□□□ -0.13
PCM1-223ENST00000524356 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
PCM1-223ENST00000524356 RNF166Q96A37 237 aaPredicted RBP14.19□□□□□ -0.14
PCM1-223ENST00000524356 VARS2Q5ST30 1063 aaKnown RBP14.16□□□□□ -0.14
PCM1-223ENST00000524356 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
PCM1-223ENST00000524356 TMEM92Q6UXU6 159 aa14.11□□□□□ -0.15
PCM1-223ENST00000524356 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
PCM1-223ENST00000524356 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
PCM1-223ENST00000524356 EFCAB3Q8N7B9 438 aa14.09□□□□□ -0.15
PCM1-223ENST00000524356 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
PCM1-223ENST00000524356 RIMBP2O15034 1052 aa14.08□□□□□ -0.16
PCM1-223ENST00000524356 MICALL2Q8IY33 904 aa14.04□□□□□ -0.16
PCM1-223ENST00000524356 ZNF687Q8N1G0 1237 aa14.04□□□□□ -0.16
PCM1-223ENST00000524356 GPR153Q6NV75 609 aa14.03□□□□□ -0.16
PCM1-223ENST00000524356 ZSWIM6Q9HCJ5 1215 aa14.03□□□□□ -0.16
PCM1-223ENST00000524356 MS4A4AQ96JQ5 239 aa13.95□□□□□ -0.18
PCM1-223ENST00000524356 PTGER2P43116 358 aa13.91□□□□□ -0.18
PCM1-223ENST00000524356 ARSIQ5FYB1 569 aa13.9□□□□□ -0.18
PCM1-223ENST00000524356 ANKRD13DQ6ZTN6 518 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms