RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
SPIDR-216ENST00000521918 WIZO95785 1651 aa11.17□□□□□ -0.62
SPIDR-216ENST00000521918 PIP4P2Q8N4L2 257 aa11.16□□□□□ -0.62
SPIDR-216ENST00000521918 CREBZFQ9NS37 354 aa11.15□□□□□ -0.62
SPIDR-216ENST00000521918 RSF1Q96T23 1441 aaPredicted RBP11.15□□□□□ -0.62
SPIDR-216ENST00000521918 NESP48681 1621 aa11.11□□□□□ -0.63
SPIDR-216ENST00000521918 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
SPIDR-216ENST00000521918 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-216ENST00000521918 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
SPIDR-216ENST00000521918 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
SPIDR-216ENST00000521918 LAMC3Q9Y6N6 1575 aa11.07□□□□□ -0.64
SPIDR-216ENST00000521918 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
SPIDR-216ENST00000521918 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-216ENST00000521918 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
SPIDR-216ENST00000521918 TOP2AP11388 1531 aaKnown RBP11.07□□□□□ -0.64
SPIDR-216ENST00000521918 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-216ENST00000521918 ERCC6Q03468 1493 aa11.04□□□□□ -0.64
SPIDR-216ENST00000521918 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
SPIDR-216ENST00000521918 CUX2O14529 1486 aa11.01□□□□□ -0.65
SPIDR-216ENST00000521918 POTEHQ6S545 545 aa11.01□□□□□ -0.65
SPIDR-216ENST00000521918 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
SPIDR-216ENST00000521918 CADPSQ9ULU8 1353 aa11.01□□□□□ -0.65
SPIDR-216ENST00000521918 KIF21AQ7Z4S6 1674 aa10.98□□□□□ -0.65
SPIDR-216ENST00000521918 FARP1Q9Y4F1 1045 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-216ENST00000521918 CFTRP13569 1480 aa10.96□□□□□ -0.65
SPIDR-216ENST00000521918 PDS5BQ9NTI5 1447 aa10.96□□□□□ -0.65
SPIDR-216ENST00000521918 NUBP1P53384 320 aa10.96□□□□□ -0.65
SPIDR-216ENST00000521918 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
SPIDR-216ENST00000521918 PKD2Q13563 968 aa10.91□□□□□ -0.66
SPIDR-216ENST00000521918 CCDC88BA6NC98 1476 aa10.91□□□□□ -0.66
SPIDR-216ENST00000521918 MRC2Q9UBG0 1479 aa10.89□□□□□ -0.67
SPIDR-216ENST00000521918 WDR62O43379 1518 aa10.89□□□□□ -0.67
SPIDR-216ENST00000521918 FANCD2Q9BXW9 1451 aa10.88□□□□□ -0.67
SPIDR-216ENST00000521918 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
SPIDR-216ENST00000521918 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
SPIDR-216ENST00000521918 PRDM2Q13029 1718 aa10.87□□□□□ -0.67
SPIDR-216ENST00000521918 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
SPIDR-216ENST00000521918 URB2Q14146 1524 aaKnown RBP10.81□□□□□ -0.68
SPIDR-216ENST00000521918 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
SPIDR-216ENST00000521918 HAX1O00165 279 aa10.8□□□□□ -0.68
SPIDR-216ENST00000521918 GSE1Q14687 1217 aa10.8□□□□□ -0.68
SPIDR-216ENST00000521918 FAM212AQ96EL1 285 aa10.8□□□□□ -0.68
SPIDR-216ENST00000521918 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
SPIDR-216ENST00000521918 CD44P16070 742 aaKnown RBP10.78□□□□□ -0.68
SPIDR-216ENST00000521918 PAK3O75914 559 aaPredicted RBP10.76□□□□□ -0.69
SPIDR-216ENST00000521918 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
SPIDR-216ENST00000521918 TSPYL2Q9H2G4 693 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-216ENST00000521918 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
SPIDR-216ENST00000521918 TOPBP1Q92547 1522 aa10.72□□□□□ -0.69
SPIDR-216ENST00000521918 DNAJC5Q9H3Z4 198 aa10.71□□□□□ -0.69
SPIDR-216ENST00000521918 ZRANB1Q9UGI0 708 aa10.71□□□□□ -0.69
SPIDR-216ENST00000521918 CCDC61Q9Y6R9 512 aa10.71□□□□□ -0.69
SPIDR-216ENST00000521918 DNMBPQ6XZF7 1577 aa10.7□□□□□ -0.7
SPIDR-216ENST00000521918 RGL2O15211 777 aa10.69□□□□□ -0.7
SPIDR-216ENST00000521918 CHRM1P11229 460 aaPredicted RBP10.69□□□□□ -0.7
SPIDR-216ENST00000521918 EVX2Q03828 476 aa10.69□□□□□ -0.7
SPIDR-216ENST00000521918 SUPT5HO00267 1087 aaKnown RBP10.68□□□□□ -0.7
SPIDR-216ENST00000521918 PYGBP11216 843 aa10.67□□□□□ -0.7
SPIDR-216ENST00000521918 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
SPIDR-216ENST00000521918 ABCC8Q09428 1581 aa10.67□□□□□ -0.7
SPIDR-216ENST00000521918 IFT140Q96RY7 1462 aa10.66□□□□□ -0.7
SPIDR-216ENST00000521918 ZNF579Q8NAF0 562 aaKnown RBP10.65□□□□□ -0.7
SPIDR-216ENST00000521918 TARBP1Q13395 1621 aaKnown RBP10.64□□□□□ -0.71
SPIDR-216ENST00000521918 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
SPIDR-216ENST00000521918 ZNF608Q9ULD9 1512 aaPredicted RBP10.63□□□□□ -0.71
SPIDR-216ENST00000521918 CUX1P39880 1505 aa10.62□□□□□ -0.71
SPIDR-216ENST00000521918 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
SPIDR-216ENST00000521918 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
SPIDR-216ENST00000521918 KIF12Q96FN5 646 aa10.59□□□□□ -0.71
SPIDR-216ENST00000521918 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
SPIDR-216ENST00000521918 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-216ENST00000521918 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
SPIDR-216ENST00000521918 CLCN6P51797 869 aa10.56□□□□□ -0.72
SPIDR-216ENST00000521918 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
SPIDR-216ENST00000521918 WDR97A6NE52 1622 aa10.55□□□□□ -0.72
SPIDR-216ENST00000521918 MAP3K13O43283 966 aa10.55□□□□□ -0.72
SPIDR-216ENST00000521918 SGIP1Q9BQI5 828 aa10.53□□□□□ -0.72
SPIDR-216ENST00000521918 AQRO60306 1485 aaKnown RBP eCLIP10.53□□□□□ -0.72
SPIDR-216ENST00000521918 SOGA1O94964 1423 aa10.52□□□□□ -0.73
SPIDR-216ENST00000521918 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
SPIDR-216ENST00000521918 BIVM-ERCC5R4GMW8 1640 aa10.51□□□□□ -0.73
SPIDR-216ENST00000521918 ZNF467Q7Z7K2 595 aaPredicted RBP10.51□□□□□ -0.73
SPIDR-216ENST00000521918 IFNL1Q8IU54 200 aa10.51□□□□□ -0.73
SPIDR-216ENST00000521918 PCDHB8Q9UN66 801 aa10.51□□□□□ -0.73
SPIDR-216ENST00000521918 SYNJ1O43426 1573 aa10.51□□□□□ -0.73
SPIDR-216ENST00000521918 TOP2BQ02880 1626 aa10.51□□□□□ -0.73
SPIDR-216ENST00000521918 GABBR2O75899 941 aa10.5□□□□□ -0.73
SPIDR-216ENST00000521918 ABCA10Q8WWZ4 1543 aa10.49□□□□□ -0.73
SPIDR-216ENST00000521918 VGFO15240 615 aaPredicted RBP10.49□□□□□ -0.73
SPIDR-216ENST00000521918 MS4A3Q96HJ5 214 aa10.49□□□□□ -0.73
SPIDR-216ENST00000521918 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
SPIDR-216ENST00000521918 TDRD9Q8NDG6 1382 aaKnown RBP10.48□□□□□ -0.73
SPIDR-216ENST00000521918 ABCA5Q8WWZ7 1642 aa10.47□□□□□ -0.73
SPIDR-216ENST00000521918 GALR2O43603 387 aaPredicted RBP10.47□□□□□ -0.73
SPIDR-216ENST00000521918 CHD1O14646 1710 aa10.45□□□□□ -0.74
SPIDR-216ENST00000521918 SNAPC4Q5SXM2 1469 aa10.45□□□□□ -0.74
SPIDR-216ENST00000521918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-216ENST00000521918 CHGAP10645 457 aaKnown RBP10.45□□□□□ -0.74
SPIDR-216ENST00000521918 HS6ST3Q8IZP7 471 aa10.45□□□□□ -0.74
SPIDR-216ENST00000521918 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms