RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 PODXL2Q9NZ53 605 aa7.49□□□□□ -1.21
NPM1-207ENST00000521260 PKNOX2Q96KN3 472 aa7.48□□□□□ -1.21
NPM1-207ENST00000521260 SPDYE2BA6NHP3 402 aa7.47□□□□□ -1.21
NPM1-207ENST00000521260 ECM2O94769 699 aaPredicted RBP7.47□□□□□ -1.21
NPM1-207ENST00000521260 SPDYE6P0CI01 402 aa7.47□□□□□ -1.21
NPM1-207ENST00000521260 SPDYE2Q495Y8 402 aa7.47□□□□□ -1.21
NPM1-207ENST00000521260 YTHDC1Q96MU7 727 aaKnown RBP7.47□□□□□ -1.21
NPM1-207ENST00000521260 ARXQ96QS3 562 aa7.46□□□□□ -1.22
NPM1-207ENST00000521260 ZNF692Q9BU19 519 aaPredicted RBP7.46□□□□□ -1.22
NPM1-207ENST00000521260 KDM2AQ9Y2K7 1162 aa7.46□□□□□ -1.22
NPM1-207ENST00000521260 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
NPM1-207ENST00000521260 MYO15BQ96JP2 1530 aa7.45□□□□□ -1.22
NPM1-207ENST00000521260 DSG3P32926 999 aa7.44□□□□□ -1.22
NPM1-207ENST00000521260 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.44□□□□□ -1.22
NPM1-207ENST00000521260 TAOK2Q9UL54 1235 aa7.44□□□□□ -1.22
NPM1-207ENST00000521260 RGL2O15211 777 aa7.43□□□□□ -1.22
NPM1-207ENST00000521260 CACNB1Q02641 598 aaPredicted RBP7.42□□□□□ -1.22
NPM1-207ENST00000521260 OSCARQ8IYS5 282 aa7.41□□□□□ -1.22
NPM1-207ENST00000521260 TSHZ2Q9NRE2 1034 aa7.41□□□□□ -1.22
NPM1-207ENST00000521260 ANO8Q9HCE9 1232 aaPredicted RBP7.4□□□□□ -1.22
NPM1-207ENST00000521260 PAXIP1Q6ZW49 1069 aaPredicted RBP7.39□□□□□ -1.23
NPM1-207ENST00000521260 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
NPM1-207ENST00000521260 PABPN1Q86U42 306 aaKnown RBP eCLIP7.38□□□□□ -1.23
NPM1-207ENST00000521260 MIER1Q8N108 512 aa7.36□□□□□ -1.23
NPM1-207ENST00000521260 DNAJC5Q9H3Z4 198 aa7.36□□□□□ -1.23
NPM1-207ENST00000521260 SPRYD3Q8NCJ5 442 aa7.35□□□□□ -1.23
NPM1-207ENST00000521260 CFAP44Q96MT7 982 aa7.35□□□□□ -1.23
NPM1-207ENST00000521260 FANCIQ9NVI1 1328 aa7.33□□□□□ -1.24
NPM1-207ENST00000521260 SUPT16HQ9Y5B9 1047 aaKnown RBP7.33□□□□□ -1.24
NPM1-207ENST00000521260 TRIM41Q8WV44 630 aa7.32□□□□□ -1.24
NPM1-207ENST00000521260 ZBTB47Q9UFB7 747 aaPredicted RBP7.32□□□□□ -1.24
NPM1-207ENST00000521260 DEKP35659 375 aaKnown RBP7.31□□□□□ -1.24
NPM1-207ENST00000521260 TPRNQ4KMQ1 711 aa7.29□□□□□ -1.24
NPM1-207ENST00000521260 ZNF326Q5BKZ1 582 aaKnown RBP7.29□□□□□ -1.24
NPM1-207ENST00000521260 HS6ST3Q8IZP7 471 aa7.29□□□□□ -1.24
NPM1-207ENST00000521260 ZNF316A6NFI3 1004 aaPredicted RBP7.28□□□□□ -1.24
NPM1-207ENST00000521260 CHGAP10645 457 aaKnown RBP7.28□□□□□ -1.24
NPM1-207ENST00000521260 PLEKHG5O94827 1062 aa7.27□□□□□ -1.25
NPM1-207ENST00000521260 RNF25Q96BH1 459 aaPredicted RBP7.27□□□□□ -1.25
NPM1-207ENST00000521260 CIZ1Q9ULV3 898 aaPredicted RBP7.27□□□□□ -1.25
NPM1-207ENST00000521260 RSPH6AQ9H0K4 717 aa7.26□□□□□ -1.25
NPM1-207ENST00000521260 SALL2Q9Y467 1007 aaPredicted RBP7.26□□□□□ -1.25
NPM1-207ENST00000521260 PDIA4P13667 645 aaKnown RBP7.24□□□□□ -1.25
NPM1-207ENST00000521260 PDE4CQ08493 712 aa7.24□□□□□ -1.25
NPM1-207ENST00000521260 RBM19Q9Y4C8 960 aaKnown RBP7.24□□□□□ -1.25
NPM1-207ENST00000521260 NUBP1P53384 320 aa7.23□□□□□ -1.25
NPM1-207ENST00000521260 RTL5Q5HYW3 569 aaPredicted RBP7.23□□□□□ -1.25
NPM1-207ENST00000521260 GSE1Q14687 1217 aa7.22□□□□□ -1.25
NPM1-207ENST00000521260 TAF7LQ5H9L4 462 aa7.21□□□□□ -1.26
NPM1-207ENST00000521260 NKX1-1Q15270 411 aaPredicted RBP7.2□□□□□ -1.26
NPM1-207ENST00000521260 HOMEZQ8IX15 550 aa7.19□□□□□ -1.26
NPM1-207ENST00000521260 GTPBP6O43824 516 aaPredicted RBP7.17□□□□□ -1.26
NPM1-207ENST00000521260 RIOK3O14730 519 aaKnown RBP7.16□□□□□ -1.26
NPM1-207ENST00000521260 FGD1P98174 961 aa7.16□□□□□ -1.26
NPM1-207ENST00000521260 SGIP1Q9BQI5 828 aa7.16□□□□□ -1.26
NPM1-207ENST00000521260 CHRM1P11229 460 aaPredicted RBP7.15□□□□□ -1.26
NPM1-207ENST00000521260 MNX1P50219 401 aaPredicted RBP7.15□□□□□ -1.26
NPM1-207ENST00000521260 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
NPM1-207ENST00000521260 CDK11AQ9UQ88 783 aaPredicted RBP7.15□□□□□ -1.26
NPM1-207ENST00000521260 CCDC136Q96JN2 1154 aa7.14□□□□□ -1.27
NPM1-207ENST00000521260 C11orf95C9JLR9 678 aaPredicted RBP7.13□□□□□ -1.27
NPM1-207ENST00000521260 NCLP19338 710 aaKnown RBP7.13□□□□□ -1.27
NPM1-207ENST00000521260 NBR1Q14596 966 aa7.12□□□□□ -1.27
NPM1-207ENST00000521260 CREBZFQ9NS37 354 aa7.12□□□□□ -1.27
NPM1-207ENST00000521260 VGFO15240 615 aaPredicted RBP7.11□□□□□ -1.27
NPM1-207ENST00000521260 SPDYE1Q8NFV5 336 aaPredicted RBP7.11□□□□□ -1.27
NPM1-207ENST00000521260 ZMYND15Q9H091 742 aa7.11□□□□□ -1.27
NPM1-207ENST00000521260 SUPT5HO00267 1087 aaKnown RBP7.1□□□□□ -1.27
NPM1-207ENST00000521260 DCAF8Q5TAQ9 597 aa7.09□□□□□ -1.27
NPM1-207ENST00000521260 RRP9O43818 475 aaKnown RBP7.08□□□□□ -1.28
NPM1-207ENST00000521260 AKT1S1Q96B36 256 aa7.08□□□□□ -1.28
NPM1-207ENST00000521260 FAM212AQ96EL1 285 aa7.08□□□□□ -1.28
NPM1-207ENST00000521260 NOP58Q9Y2X3 529 aaKnown RBP7.08□□□□□ -1.28
NPM1-207ENST00000521260 AAMPQ13685 434 aa7.07□□□□□ -1.28
NPM1-207ENST00000521260 STK25O00506 426 aa7.06□□□□□ -1.28
NPM1-207ENST00000521260 RASEFQ8IZ41 740 aa7.05□□□□□ -1.28
NPM1-207ENST00000521260 BRD2P25440 801 aaKnown RBP7.04□□□□□ -1.28
NPM1-207ENST00000521260 FAM43AQ8N2R8 423 aa7.04□□□□□ -1.28
NPM1-207ENST00000521260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.03□□□□□ -1.28
NPM1-207ENST00000521260 ZFP91Q96JP5 570 aaPredicted RBP7.03□□□□□ -1.28
NPM1-207ENST00000521260 RBM42Q9BTD8 480 aaKnown RBP7.03□□□□□ -1.28
NPM1-207ENST00000521260 RYDENQ9NUL5 291 aaKnown RBP7.03□□□□□ -1.28
NPM1-207ENST00000521260 RBM10P98175 930 aaKnown RBP7.02□□□□□ -1.29
NPM1-207ENST00000521260 PRR29P0C7W0 189 aa7.01□□□□□ -1.29
NPM1-207ENST00000521260 HSP90AA2PQ14568 343 aaPredicted RBP7.01□□□□□ -1.29
NPM1-207ENST00000521260 BCL11BQ9C0K0 894 aaPredicted RBP7.01□□□□□ -1.29
NPM1-207ENST00000521260 PPM1GO15355 546 aaPredicted RBP7□□□□□ -1.29
NPM1-207ENST00000521260 ANP32AP39687 249 aaKnown RBP7□□□□□ -1.29
NPM1-207ENST00000521260 REM2Q8IYK8 340 aaPredicted RBP7□□□□□ -1.29
NPM1-207ENST00000521260 WASHC2CQ9Y4E1 1318 aa7□□□□□ -1.29
NPM1-207ENST00000521260 RSPH4AQ5TD94 716 aa6.99□□□□□ -1.29
NPM1-207ENST00000521260 NAP1L5Q96NT1 182 aaPredicted RBP6.99□□□□□ -1.29
NPM1-207ENST00000521260 STK24Q9Y6E0 443 aa6.99□□□□□ -1.29
NPM1-207ENST00000521260 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
NPM1-207ENST00000521260 LOC105371045A0A1W2PR82 267 aa6.97□□□□□ -1.29
NPM1-207ENST00000521260 HSP90AA1P07900 732 aaKnown RBP6.97□□□□□ -1.29
NPM1-207ENST00000521260 POTEHQ6S545 545 aa6.97□□□□□ -1.29
NPM1-207ENST00000521260 BCCIPQ9P287 314 aaKnown RBP eCLIP6.97□□□□□ -1.29
NPM1-207ENST00000521260 TIMELESSQ9UNS1 1208 aa6.97□□□□□ -1.29
NPM1-207ENST00000521260 CLEC11AQ9Y240 323 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms