RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
SKP1-207ENST00000520417 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
SKP1-207ENST00000520417 CLCN6P51797 869 aa13.73□□□□□ -0.21
SKP1-207ENST00000520417 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
SKP1-207ENST00000520417 GALR2O43603 387 aaPredicted RBP13.7□□□□□ -0.22
SKP1-207ENST00000520417 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
SKP1-207ENST00000520417 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
SKP1-207ENST00000520417 MS4A3Q96HJ5 214 aa13.64□□□□□ -0.23
SKP1-207ENST00000520417 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
SKP1-207ENST00000520417 MAP3K13O43283 966 aa13.61□□□□□ -0.23
SKP1-207ENST00000520417 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
SKP1-207ENST00000520417 PYGBP11216 843 aa13.59□□□□□ -0.23
SKP1-207ENST00000520417 GSE1Q14687 1217 aa13.59□□□□□ -0.23
SKP1-207ENST00000520417 PCDHB13Q9Y5F0 798 aa13.57□□□□□ -0.24
SKP1-207ENST00000520417 POTEIP0CG38 1075 aa13.54□□□□□ -0.24
SKP1-207ENST00000520417 TRPC6Q9Y210 931 aa13.47□□□□□ -0.25
SKP1-207ENST00000520417 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
SKP1-207ENST00000520417 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
SKP1-207ENST00000520417 PCDHB8Q9UN66 801 aa13.43□□□□□ -0.26
SKP1-207ENST00000520417 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
SKP1-207ENST00000520417 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
SKP1-207ENST00000520417 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
SKP1-207ENST00000520417 TIE1P35590 1138 aa13.37□□□□□ -0.27
SKP1-207ENST00000520417 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
SKP1-207ENST00000520417 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
SKP1-207ENST00000520417 CHRM1P11229 460 aaPredicted RBP13.35□□□□□ -0.27
SKP1-207ENST00000520417 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
SKP1-207ENST00000520417 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
SKP1-207ENST00000520417 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
SKP1-207ENST00000520417 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
SKP1-207ENST00000520417 SLC39A7Q92504 469 aa13.29□□□□□ -0.28
SKP1-207ENST00000520417 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
SKP1-207ENST00000520417 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
SKP1-207ENST00000520417 LHX8Q68G74 356 aa13.28□□□□□ -0.28
SKP1-207ENST00000520417 C7P10643 843 aa13.25□□□□□ -0.29
SKP1-207ENST00000520417 PSEN1P49768 467 aa13.23□□□□□ -0.29
SKP1-207ENST00000520417 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
SKP1-207ENST00000520417 SEC24BO95487 1268 aa13.21□□□□□ -0.29
SKP1-207ENST00000520417 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
SKP1-207ENST00000520417 PDAP1Q13442 181 aaKnown RBP13.2□□□□□ -0.3
SKP1-207ENST00000520417 RIOK3O14730 519 aaKnown RBP13.16□□□□□ -0.3
SKP1-207ENST00000520417 PKD2Q13563 968 aa13.14□□□□□ -0.31
SKP1-207ENST00000520417 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
SKP1-207ENST00000520417 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
SKP1-207ENST00000520417 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
SKP1-207ENST00000520417 IER5LQ5T953 404 aa13.12□□□□□ -0.31
SKP1-207ENST00000520417 CABP2Q9NPB3 220 aa13.11□□□□□ -0.31
SKP1-207ENST00000520417 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
SKP1-207ENST00000520417 PLCG2P16885 1265 aa13.1□□□□□ -0.31
SKP1-207ENST00000520417 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
SKP1-207ENST00000520417 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
SKP1-207ENST00000520417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
SKP1-207ENST00000520417 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
SKP1-207ENST00000520417 RGL2O15211 777 aa13.05□□□□□ -0.32
SKP1-207ENST00000520417 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
SKP1-207ENST00000520417 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.33
SKP1-207ENST00000520417 OCEL1Q9H607 264 aa13.02□□□□□ -0.33
SKP1-207ENST00000520417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.332e-10■■□□□ 14
SKP1-207ENST00000520417 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
SKP1-207ENST00000520417 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
SKP1-207ENST00000520417 EFCAB3Q8N7B9 438 aa12.98□□□□□ -0.33
SKP1-207ENST00000520417 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
SKP1-207ENST00000520417 STK25O00506 426 aa12.97□□□□□ -0.33
SKP1-207ENST00000520417 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
SKP1-207ENST00000520417 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
SKP1-207ENST00000520417 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
SKP1-207ENST00000520417 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
SKP1-207ENST00000520417 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
SKP1-207ENST00000520417 G3V3G9 751 aa12.87□□□□□ -0.35
SKP1-207ENST00000520417 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
SKP1-207ENST00000520417 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
SKP1-207ENST00000520417 SOX12O15370 315 aa12.84□□□□□ -0.35
SKP1-207ENST00000520417 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
SKP1-207ENST00000520417 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
SKP1-207ENST00000520417 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
SKP1-207ENST00000520417 SLAIN1Q8ND83 568 aa12.81□□□□□ -0.36
SKP1-207ENST00000520417 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
SKP1-207ENST00000520417 ILDR1Q86SU0 546 aaPredicted RBP12.79□□□□□ -0.36
SKP1-207ENST00000520417 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
SKP1-207ENST00000520417 NLRP6P59044 892 aa12.77□□□□□ -0.37
SKP1-207ENST00000520417 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
SKP1-207ENST00000520417 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
SKP1-207ENST00000520417 MS4A4AQ96JQ5 239 aa12.73□□□□□ -0.37
SKP1-207ENST00000520417 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
SKP1-207ENST00000520417 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
SKP1-207ENST00000520417 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
SKP1-207ENST00000520417 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
SKP1-207ENST00000520417 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
SKP1-207ENST00000520417 TMEM121BQ9BXQ6 578 aaPredicted RBP12.61□□□□□ -0.39
SKP1-207ENST00000520417 SNPHO15079 494 aa12.56□□□□□ -0.4
SKP1-207ENST00000520417 PPP1R37O75864 691 aa12.56□□□□□ -0.4
SKP1-207ENST00000520417 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
SKP1-207ENST00000520417 TMEM92Q6UXU6 159 aa12.51□□□□□ -0.41
SKP1-207ENST00000520417 ST18O60284 1047 aa12.5□□□□□ -0.41
SKP1-207ENST00000520417 POTEMA6NI47 508 aa12.49□□□□□ -0.41
SKP1-207ENST00000520417 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
SKP1-207ENST00000520417 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
SKP1-207ENST00000520417 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
SKP1-207ENST00000520417 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
SKP1-207ENST00000520417 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms