RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
NPM1-205ENST00000518587 SPOCK2Q92563 424 aa12.26□□□□□ -0.45
NPM1-205ENST00000518587 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
NPM1-205ENST00000518587 NUBP1P53384 320 aa12.22□□□□□ -0.45
NPM1-205ENST00000518587 POTEHQ6S545 545 aa12.2□□□□□ -0.46
NPM1-205ENST00000518587 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
NPM1-205ENST00000518587 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
NPM1-205ENST00000518587 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
NPM1-205ENST00000518587 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
NPM1-205ENST00000518587 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
NPM1-205ENST00000518587 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
NPM1-205ENST00000518587 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
NPM1-205ENST00000518587 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
NPM1-205ENST00000518587 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
NPM1-205ENST00000518587 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
NPM1-205ENST00000518587 BAZ1AQ9NRL2 1556 aaPredicted RBP12.08□□□□□ -0.48
NPM1-205ENST00000518587 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
NPM1-205ENST00000518587 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
NPM1-205ENST00000518587 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
NPM1-205ENST00000518587 CUX2O14529 1486 aa12.07□□□□□ -0.48
NPM1-205ENST00000518587 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
NPM1-205ENST00000518587 HAX1O00165 279 aa12.05□□□□□ -0.48
NPM1-205ENST00000518587 GSE1Q14687 1217 aa12.05□□□□□ -0.48
NPM1-205ENST00000518587 PKD2Q13563 968 aa12.04□□□□□ -0.48
NPM1-205ENST00000518587 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
NPM1-205ENST00000518587 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
NPM1-205ENST00000518587 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
NPM1-205ENST00000518587 EVX2Q03828 476 aa12.01□□□□□ -0.49
NPM1-205ENST00000518587 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
NPM1-205ENST00000518587 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
NPM1-205ENST00000518587 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
NPM1-205ENST00000518587 DNAJC5Q9H3Z4 198 aa11.97□□□□□ -0.49
NPM1-205ENST00000518587 ECM2O94769 699 aaPredicted RBP11.93□□□□□ -0.5
NPM1-205ENST00000518587 PYGBP11216 843 aa11.93□□□□□ -0.5
NPM1-205ENST00000518587 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
NPM1-205ENST00000518587 CHRM1P11229 460 aaPredicted RBP11.92□□□□□ -0.5
NPM1-205ENST00000518587 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
NPM1-205ENST00000518587 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
NPM1-205ENST00000518587 PHF12Q96QT6 1004 aa11.9□□□□□ -0.5
NPM1-205ENST00000518587 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
NPM1-205ENST00000518587 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
NPM1-205ENST00000518587 RGL2O15211 777 aa11.84□□□□□ -0.51
NPM1-205ENST00000518587 MAP3K13O43283 966 aa11.84□□□□□ -0.51
NPM1-205ENST00000518587 MROH2BQ7Z745 1585 aa11.83□□□□□ -0.52
NPM1-205ENST00000518587 RNF25Q96BH1 459 aaPredicted RBP11.82□□□□□ -0.52
NPM1-205ENST00000518587 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
NPM1-205ENST00000518587 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
NPM1-205ENST00000518587 NESP48681 1621 aa11.79□□□□□ -0.52
NPM1-205ENST00000518587 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
NPM1-205ENST00000518587 CADPSQ9ULU8 1353 aa11.78□□□□□ -0.52
NPM1-205ENST00000518587 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
NPM1-205ENST00000518587 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.53
NPM1-205ENST00000518587 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
NPM1-205ENST00000518587 SLC24A1O60721 1099 aa11.76□□□□□ -0.53
NPM1-205ENST00000518587 MS4A3Q96HJ5 214 aa11.76□□□□□ -0.53
NPM1-205ENST00000518587 CLCN6P51797 869 aa11.75□□□□□ -0.53
NPM1-205ENST00000518587 SP7Q8TDD2 431 aaPredicted RBP11.75□□□□□ -0.53
NPM1-205ENST00000518587 GABBR2O75899 941 aa11.74□□□□□ -0.53
NPM1-205ENST00000518587 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
NPM1-205ENST00000518587 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
NPM1-205ENST00000518587 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
NPM1-205ENST00000518587 KIF21AQ7Z4S6 1674 aa11.7□□□□□ -0.54
NPM1-205ENST00000518587 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
NPM1-205ENST00000518587 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
NPM1-205ENST00000518587 WDR62O43379 1518 aa11.68□□□□□ -0.54
NPM1-205ENST00000518587 WIZO95785 1651 aa11.67□□□□□ -0.54
NPM1-205ENST00000518587 CEP164Q9UPV0 1460 aa11.66□□□□□ -0.54
NPM1-205ENST00000518587 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
NPM1-205ENST00000518587 PSEN1P49768 467 aa11.65□□□□□ -0.54
NPM1-205ENST00000518587 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
NPM1-205ENST00000518587 TOP2AP11388 1531 aaKnown RBP11.65□□□□□ -0.55
NPM1-205ENST00000518587 CFTRP13569 1480 aa11.63□□□□□ -0.55
NPM1-205ENST00000518587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
NPM1-205ENST00000518587 ZFP91Q96JP5 570 aaPredicted RBP11.63□□□□□ -0.55
NPM1-205ENST00000518587 RSF1Q96T23 1441 aaPredicted RBP11.61□□□□□ -0.55
NPM1-205ENST00000518587 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
NPM1-205ENST00000518587 TIE1P35590 1138 aa11.6□□□□□ -0.55
NPM1-205ENST00000518587 CHGAP10645 457 aaKnown RBP11.59□□□□□ -0.55
NPM1-205ENST00000518587 BMP2KQ9NSY1 1161 aaPredicted RBP11.59□□□□□ -0.55
NPM1-205ENST00000518587 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
NPM1-205ENST00000518587 TTLL13PA6NNM8 815 aa11.57□□□□□ -0.56
NPM1-205ENST00000518587 STK25O00506 426 aa11.57□□□□□ -0.56
NPM1-205ENST00000518587 HS6ST3Q8IZP7 471 aa11.56□□□□□ -0.56
NPM1-205ENST00000518587 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
NPM1-205ENST00000518587 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
NPM1-205ENST00000518587 ATMINO43313 823 aaPredicted RBP11.54□□□□□ -0.56
NPM1-205ENST00000518587 DCBLD2Q96PD2 775 aa11.54□□□□□ -0.56
NPM1-205ENST00000518587 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
NPM1-205ENST00000518587 ASTLQ6HA08 431 aaPredicted RBP11.53□□□□□ -0.56
NPM1-205ENST00000518587 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
NPM1-205ENST00000518587 ABCC8Q09428 1581 aa11.52□□□□□ -0.57
NPM1-205ENST00000518587 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
NPM1-205ENST00000518587 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
NPM1-205ENST00000518587 TRIM35Q9UPQ4 493 aa11.49□□□□□ -0.57
NPM1-205ENST00000518587 PELP1Q8IZL8 1130 aaKnown RBP11.47□□□□□ -0.57
NPM1-205ENST00000518587 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.57
NPM1-205ENST00000518587 IFT140Q96RY7 1462 aa11.45□□□□□ -0.58
NPM1-205ENST00000518587 EFCAB3Q8N7B9 438 aa11.45□□□□□ -0.58
NPM1-205ENST00000518587 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
NPM1-205ENST00000518587 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms