RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
CPS1-210ENST00000518043 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
CPS1-210ENST00000518043 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
CPS1-210ENST00000518043 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
CPS1-210ENST00000518043 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
CPS1-210ENST00000518043 WIZO95785 1651 aa12.38□□□□□ -0.43
CPS1-210ENST00000518043 PKD2Q13563 968 aa12.38□□□□□ -0.43
CPS1-210ENST00000518043 NUBP1P53384 320 aa12.37□□□□□ -0.43
CPS1-210ENST00000518043 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
CPS1-210ENST00000518043 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
CPS1-210ENST00000518043 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
CPS1-210ENST00000518043 CIZ1Q9ULV3 898 aaPredicted RBP12.33□□□□□ -0.44
CPS1-210ENST00000518043 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
CPS1-210ENST00000518043 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
CPS1-210ENST00000518043 ATAD2BQ9ULI0 1458 aa12.29□□□□□ -0.44
CPS1-210ENST00000518043 ECM2O94769 699 aaPredicted RBP12.28□□□□□ -0.44
CPS1-210ENST00000518043 GSE1Q14687 1217 aa12.28□□□□□ -0.44
CPS1-210ENST00000518043 RASEFQ8IZ41 740 aa12.27□□□□□ -0.45
CPS1-210ENST00000518043 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
CPS1-210ENST00000518043 DCAF8Q5TAQ9 597 aa12.26□□□□□ -0.45
CPS1-210ENST00000518043 FAM212AQ96EL1 285 aa12.26□□□□□ -0.45
CPS1-210ENST00000518043 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
CPS1-210ENST00000518043 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
CPS1-210ENST00000518043 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
CPS1-210ENST00000518043 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
CPS1-210ENST00000518043 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
CPS1-210ENST00000518043 BAZ1BQ9UIG0 1483 aaKnown RBP12.17□□□□□ -0.46
CPS1-210ENST00000518043 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
CPS1-210ENST00000518043 RGL2O15211 777 aa12.15□□□□□ -0.46
CPS1-210ENST00000518043 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
CPS1-210ENST00000518043 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
CPS1-210ENST00000518043 CCDC88BA6NC98 1476 aa12.08□□□□□ -0.47
CPS1-210ENST00000518043 PYGBP11216 843 aa12.08□□□□□ -0.48
CPS1-210ENST00000518043 RNF25Q96BH1 459 aaPredicted RBP12.06□□□□□ -0.48
CPS1-210ENST00000518043 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
CPS1-210ENST00000518043 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
CPS1-210ENST00000518043 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
CPS1-210ENST00000518043 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
CPS1-210ENST00000518043 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
CPS1-210ENST00000518043 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
CPS1-210ENST00000518043 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
CPS1-210ENST00000518043 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
CPS1-210ENST00000518043 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
CPS1-210ENST00000518043 KIF12Q96FN5 646 aa11.92□□□□□ -0.5
CPS1-210ENST00000518043 HAX1O00165 279 aa11.91□□□□□ -0.5
CPS1-210ENST00000518043 PHF12Q96QT6 1004 aa11.91□□□□□ -0.5
CPS1-210ENST00000518043 MAP3K13O43283 966 aa11.9□□□□□ -0.5
CPS1-210ENST00000518043 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
CPS1-210ENST00000518043 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
CPS1-210ENST00000518043 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
CPS1-210ENST00000518043 CFTRP13569 1480 aa11.89□□□□□ -0.51
CPS1-210ENST00000518043 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
CPS1-210ENST00000518043 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
CPS1-210ENST00000518043 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
CPS1-210ENST00000518043 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
CPS1-210ENST00000518043 POTEHQ6S545 545 aa11.87□□□□□ -0.51
CPS1-210ENST00000518043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
CPS1-210ENST00000518043 IFNL1Q8IU54 200 aa11.86□□□□□ -0.51
CPS1-210ENST00000518043 ZFP91Q96JP5 570 aaPredicted RBP11.86□□□□□ -0.51
CPS1-210ENST00000518043 STK25O00506 426 aa11.85□□□□□ -0.51
CPS1-210ENST00000518043 NESP48681 1621 aa11.85□□□□□ -0.51
CPS1-210ENST00000518043 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
CPS1-210ENST00000518043 EVX2Q03828 476 aa11.83□□□□□ -0.52
CPS1-210ENST00000518043 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.83□□□□□ -0.52
CPS1-210ENST00000518043 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
CPS1-210ENST00000518043 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
CPS1-210ENST00000518043 BCL11BQ9C0K0 894 aaPredicted RBP11.81□□□□□ -0.52
CPS1-210ENST00000518043 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
CPS1-210ENST00000518043 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
CPS1-210ENST00000518043 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
CPS1-210ENST00000518043 PSEN1P49768 467 aa11.79□□□□□ -0.52
CPS1-210ENST00000518043 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
CPS1-210ENST00000518043 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
CPS1-210ENST00000518043 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
CPS1-210ENST00000518043 SYNJ1O43426 1573 aa11.74□□□□□ -0.53
CPS1-210ENST00000518043 KIF21AQ7Z4S6 1674 aa11.74□□□□□ -0.53
CPS1-210ENST00000518043 PAXIP1Q6ZW49 1069 aaPredicted RBP11.73□□□□□ -0.53
CPS1-210ENST00000518043 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
CPS1-210ENST00000518043 NKX1-1Q15270 411 aaPredicted RBP11.72□□□□□ -0.53
CPS1-210ENST00000518043 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
CPS1-210ENST00000518043 CLCN6P51797 869 aa11.71□□□□□ -0.53
CPS1-210ENST00000518043 SPRYD3Q8NCJ5 442 aa11.71□□□□□ -0.53
CPS1-210ENST00000518043 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
CPS1-210ENST00000518043 CUX1P39880 1505 aa11.7□□□□□ -0.54
CPS1-210ENST00000518043 BIVM-ERCC5R4GMW8 1640 aa11.7□□□□□ -0.54
CPS1-210ENST00000518043 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
CPS1-210ENST00000518043 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
CPS1-210ENST00000518043 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
CPS1-210ENST00000518043 CEP164Q9UPV0 1460 aa11.66□□□□□ -0.54
CPS1-210ENST00000518043 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
CPS1-210ENST00000518043 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
CPS1-210ENST00000518043 CABP2Q9NPB3 220 aa11.65□□□□□ -0.54
CPS1-210ENST00000518043 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
CPS1-210ENST00000518043 TIE1P35590 1138 aa11.64□□□□□ -0.55
CPS1-210ENST00000518043 HAP1P54257 671 aaPredicted RBP11.64□□□□□ -0.55
CPS1-210ENST00000518043 DNMBPQ6XZF7 1577 aa11.63□□□□□ -0.55
CPS1-210ENST00000518043 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
CPS1-210ENST00000518043 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
CPS1-210ENST00000518043 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
CPS1-210ENST00000518043 GABBR2O75899 941 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms