RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
NPM1-204ENST00000517671 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
NPM1-204ENST00000517671 CLCN6P51797 869 aa16.09■□□□□ 0.17
NPM1-204ENST00000517671 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
NPM1-204ENST00000517671 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
NPM1-204ENST00000517671 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
NPM1-204ENST00000517671 IFNLR1Q8IU57 520 aaPredicted RBP16.01■□□□□ 0.15
NPM1-204ENST00000517671 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
NPM1-204ENST00000517671 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
NPM1-204ENST00000517671 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
NPM1-204ENST00000517671 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
NPM1-204ENST00000517671 DCBLD2Q96PD2 775 aa15.94■□□□□ 0.14
NPM1-204ENST00000517671 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
NPM1-204ENST00000517671 MNX1P50219 401 aaPredicted RBP15.91■□□□□ 0.14
NPM1-204ENST00000517671 SPOCK2Q92563 424 aa15.9■□□□□ 0.14
NPM1-204ENST00000517671 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
NPM1-204ENST00000517671 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
NPM1-204ENST00000517671 GALR2O43603 387 aaPredicted RBP15.8■□□□□ 0.12
NPM1-204ENST00000517671 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
NPM1-204ENST00000517671 NUBP1P53384 320 aa15.75■□□□□ 0.11
NPM1-204ENST00000517671 DCAF8Q5TAQ9 597 aa15.71■□□□□ 0.11
NPM1-204ENST00000517671 FAM212AQ96EL1 285 aa15.71■□□□□ 0.11
NPM1-204ENST00000517671 PHF12Q96QT6 1004 aa15.69■□□□□ 0.1
NPM1-204ENST00000517671 GSE1Q14687 1217 aa15.68■□□□□ 0.1
NPM1-204ENST00000517671 RASEFQ8IZ41 740 aa15.68■□□□□ 0.1
NPM1-204ENST00000517671 CIZ1Q9ULV3 898 aaPredicted RBP15.68■□□□□ 0.1
NPM1-204ENST00000517671 TSPYL2Q9H2G4 693 aaPredicted RBP15.68■□□□□ 0.1
NPM1-204ENST00000517671 AMER1Q5JTC6 1135 aaPredicted RBP15.63■□□□□ 0.09
NPM1-204ENST00000517671 POTEB2H3BUK9 544 aa15.55■□□□□ 0.08
NPM1-204ENST00000517671 OTUD5Q96G74 571 aa15.55■□□□□ 0.08
NPM1-204ENST00000517671 CUX2O14529 1486 aa15.54■□□□□ 0.08
NPM1-204ENST00000517671 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.08
NPM1-204ENST00000517671 TRIM41Q8WV44 630 aa15.52■□□□□ 0.08
NPM1-204ENST00000517671 MS4A3Q96HJ5 214 aa15.49■□□□□ 0.07
NPM1-204ENST00000517671 CCDC61Q9Y6R9 512 aa15.49■□□□□ 0.07
NPM1-204ENST00000517671 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
NPM1-204ENST00000517671 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
NPM1-204ENST00000517671 ECM2O94769 699 aaPredicted RBP15.45■□□□□ 0.06
NPM1-204ENST00000517671 PKD2Q13563 968 aa15.45■□□□□ 0.06
NPM1-204ENST00000517671 ASTLQ6HA08 431 aaPredicted RBP15.45■□□□□ 0.06
NPM1-204ENST00000517671 PYGBP11216 843 aa15.44■□□□□ 0.06
NPM1-204ENST00000517671 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
NPM1-204ENST00000517671 ATMINO43313 823 aaPredicted RBP15.41■□□□□ 0.06
NPM1-204ENST00000517671 CHRM1P11229 460 aaPredicted RBP15.41■□□□□ 0.06
NPM1-204ENST00000517671 PLSCR2Q9NRY7 297 aa15.41■□□□□ 0.06
NPM1-204ENST00000517671 METRNQ9UJH8 293 aa15.4■□□□□ 0.06
NPM1-204ENST00000517671 SLC39A7Q92504 469 aa15.38■□□□□ 0.05
NPM1-204ENST00000517671 C7P10643 843 aa15.37■□□□□ 0.05
NPM1-204ENST00000517671 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
NPM1-204ENST00000517671 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
NPM1-204ENST00000517671 MAP3K13O43283 966 aa15.32■□□□□ 0.04
NPM1-204ENST00000517671 SGIP1Q9BQI5 828 aa15.32■□□□□ 0.04
NPM1-204ENST00000517671 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
NPM1-204ENST00000517671 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
NPM1-204ENST00000517671 ZNF467Q7Z7K2 595 aaPredicted RBP15.28■□□□□ 0.04
NPM1-204ENST00000517671 POTEJP0CG39 1038 aa15.27■□□□□ 0.04
NPM1-204ENST00000517671 ATN1P54259 1190 aaPredicted RBP15.27■□□□□ 0.04
NPM1-204ENST00000517671 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
NPM1-204ENST00000517671 POTEMA6NI47 508 aa15.26■□□□□ 0.03
NPM1-204ENST00000517671 TAOK2Q9UL54 1235 aa15.25■□□□□ 0.03
NPM1-204ENST00000517671 RGL2O15211 777 aa15.23■□□□□ 0.03
NPM1-204ENST00000517671 MAMSTRQ6ZN01 415 aa15.23■□□□□ 0.03
NPM1-204ENST00000517671 RIOK3O14730 519 aaKnown RBP15.22■□□□□ 0.03
NPM1-204ENST00000517671 POTEGQ6S5H5 508 aa15.21■□□□□ 0.03
NPM1-204ENST00000517671 PCDHB8Q9UN66 801 aa15.21■□□□□ 0.03
NPM1-204ENST00000517671 IFNL1Q8IU54 200 aa15.2■□□□□ 0.02
NPM1-204ENST00000517671 BMP2KQ9NSY1 1161 aaPredicted RBP15.19■□□□□ 0.02
NPM1-204ENST00000517671 TRPC6Q9Y210 931 aa15.18■□□□□ 0.02
NPM1-204ENST00000517671 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
NPM1-204ENST00000517671 RNF25Q96BH1 459 aaPredicted RBP15.16■□□□□ 0.02
NPM1-204ENST00000517671 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
NPM1-204ENST00000517671 TIE1P35590 1138 aa15.15■□□□□ 0.02
NPM1-204ENST00000517671 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
NPM1-204ENST00000517671 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
NPM1-204ENST00000517671 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
NPM1-204ENST00000517671 PDAP1Q13442 181 aaKnown RBP15.13■□□□□ 0.01
NPM1-204ENST00000517671 SCUBE2Q9NQ36 999 aa15.13■□□□□ 0.01
NPM1-204ENST00000517671 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
NPM1-204ENST00000517671 NESP48681 1621 aa15.11■□□□□ 0.01
NPM1-204ENST00000517671 LAMC3Q9Y6N6 1575 aa15.1■□□□□ 0.01
NPM1-204ENST00000517671 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
NPM1-204ENST00000517671 PSEN1P49768 467 aa15.09■□□□□ 0.01
NPM1-204ENST00000517671 TTLL13PA6NNM8 815 aa15.04■□□□□ -0
NPM1-204ENST00000517671 PCDH10Q9P2E7 1040 aa15.04■□□□□ -0
NPM1-204ENST00000517671 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
NPM1-204ENST00000517671 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
NPM1-204ENST00000517671 TMEM106CQ9BVX2 250 aa15.03■□□□□ -0
NPM1-204ENST00000517671 LCE2DQ5TA82 110 aaPredicted RBP15.02■□□□□ -0
NPM1-204ENST00000517671 FAM163AQ96GL9 167 aaPredicted RBP15.02■□□□□ -0
NPM1-204ENST00000517671 STK25O00506 426 aa15.01□□□□□ -0.01
NPM1-204ENST00000517671 CADPSQ9ULU8 1353 aa15.01□□□□□ -0.01
NPM1-204ENST00000517671 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
NPM1-204ENST00000517671 SEC24BO95487 1268 aa14.99□□□□□ -0.01
NPM1-204ENST00000517671 COLQQ9Y215 455 aaPredicted RBP14.99□□□□□ -0.01
NPM1-204ENST00000517671 THOC2Q8NI27 1593 aaKnown RBP14.99□□□□□ -0.01
NPM1-204ENST00000517671 GOLGA2Q08379 1002 aa14.97□□□□□ -0.01
NPM1-204ENST00000517671 STK24Q9Y6E0 443 aa14.97□□□□□ -0.01
NPM1-204ENST00000517671 BCL11BQ9C0K0 894 aaPredicted RBP14.96□□□□□ -0.01
NPM1-204ENST00000517671 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
NPM1-204ENST00000517671 IER5LQ5T953 404 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms