RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 CCDC61Q9Y6R9 512 aa7.18□□□□□ -1.26
RN7SKP49-201ENST00000516675 GALR2O43603 387 aaPredicted RBP7.17□□□□□ -1.26
RN7SKP49-201ENST00000516675 DCAF8Q5TAQ9 597 aa7.14□□□□□ -1.27
RN7SKP49-201ENST00000516675 FAM212AQ96EL1 285 aa7.14□□□□□ -1.27
RN7SKP49-201ENST00000516675 KIF12Q96FN5 646 aa7.13□□□□□ -1.27
RN7SKP49-201ENST00000516675 SPOCK2Q92563 424 aa7.12□□□□□ -1.27
RN7SKP49-201ENST00000516675 MS4A3Q96HJ5 214 aa7.12□□□□□ -1.27
RN7SKP49-201ENST00000516675 MAP3K13O43283 966 aa7.11□□□□□ -1.27
RN7SKP49-201ENST00000516675 POTEIP0CG38 1075 aa7.11□□□□□ -1.27
RN7SKP49-201ENST00000516675 CLCN6P51797 869 aa7.11□□□□□ -1.27
RN7SKP49-201ENST00000516675 PYGBP11216 843 aa7.09□□□□□ -1.27
RN7SKP49-201ENST00000516675 DCBLD2Q96PD2 775 aa7.08□□□□□ -1.28
RN7SKP49-201ENST00000516675 TRPC6Q9Y210 931 aa7.08□□□□□ -1.28
RN7SKP49-201ENST00000516675 GSE1Q14687 1217 aa7.06□□□□□ -1.28
RN7SKP49-201ENST00000516675 CIZ1Q9ULV3 898 aaPredicted RBP7.06□□□□□ -1.28
RN7SKP49-201ENST00000516675 PCDHB13Q9Y5F0 798 aa7.05□□□□□ -1.28
RN7SKP49-201ENST00000516675 IFNL1Q8IU54 200 aa7.04□□□□□ -1.28
RN7SKP49-201ENST00000516675 PELP1Q8IZL8 1130 aaKnown RBP7.02□□□□□ -1.29
RN7SKP49-201ENST00000516675 PCDHB8Q9UN66 801 aa7.02□□□□□ -1.29
RN7SKP49-201ENST00000516675 SGIP1Q9BQI5 828 aa7.01□□□□□ -1.29
RN7SKP49-201ENST00000516675 ATMINO43313 823 aaPredicted RBP7□□□□□ -1.29
RN7SKP49-201ENST00000516675 ASTLQ6HA08 431 aaPredicted RBP7□□□□□ -1.29
RN7SKP49-201ENST00000516675 BMP2KQ9NSY1 1161 aaPredicted RBP7□□□□□ -1.29
RN7SKP49-201ENST00000516675 ATN1P54259 1190 aaPredicted RBP6.99□□□□□ -1.29
RN7SKP49-201ENST00000516675 CHRM1P11229 460 aaPredicted RBP6.98□□□□□ -1.29
RN7SKP49-201ENST00000516675 TTLL13PA6NNM8 815 aa6.97□□□□□ -1.29
RN7SKP49-201ENST00000516675 TIE1P35590 1138 aa6.96□□□□□ -1.3
RN7SKP49-201ENST00000516675 TMEM106CQ9BVX2 250 aa6.95□□□□□ -1.3
RN7SKP49-201ENST00000516675 ZNF467Q7Z7K2 595 aaPredicted RBP6.93□□□□□ -1.3
RN7SKP49-201ENST00000516675 METRNQ9UJH8 293 aa6.92□□□□□ -1.3
RN7SKP49-201ENST00000516675 TRIM35Q9UPQ4 493 aa6.92□□□□□ -1.3
RN7SKP49-201ENST00000516675 PKD2Q13563 968 aa6.91□□□□□ -1.3
RN7SKP49-201ENST00000516675 LHX8Q68G74 356 aa6.91□□□□□ -1.3
RN7SKP49-201ENST00000516675 RNF25Q96BH1 459 aaPredicted RBP6.91□□□□□ -1.3
RN7SKP49-201ENST00000516675 POTEB2H3BUK9 544 aa6.9□□□□□ -1.3
RN7SKP49-201ENST00000516675 TRIM41Q8WV44 630 aa6.9□□□□□ -1.3
RN7SKP49-201ENST00000516675 SLC39A7Q92504 469 aa6.9□□□□□ -1.3
RN7SKP49-201ENST00000516675 ECM2O94769 699 aaPredicted RBP6.89□□□□□ -1.31
RN7SKP49-201ENST00000516675 C7P10643 843 aa6.89□□□□□ -1.31
RN7SKP49-201ENST00000516675 PSEN1P49768 467 aa6.89□□□□□ -1.31
RN7SKP49-201ENST00000516675 POTEFA5A3E0 1075 aa6.88□□□□□ -1.31
RN7SKP49-201ENST00000516675 PDAP1Q13442 181 aaKnown RBP6.88□□□□□ -1.31
RN7SKP49-201ENST00000516675 COLQQ9Y215 455 aaPredicted RBP6.87□□□□□ -1.31
RN7SKP49-201ENST00000516675 RIOK3O14730 519 aaKnown RBP6.86□□□□□ -1.31
RN7SKP49-201ENST00000516675 RGL2O15211 777 aa6.85□□□□□ -1.31
RN7SKP49-201ENST00000516675 POTEJP0CG39 1038 aa6.84□□□□□ -1.31
RN7SKP49-201ENST00000516675 SEC24BO95487 1268 aa6.83□□□□□ -1.32
RN7SKP49-201ENST00000516675 CABP2Q9NPB3 220 aa6.83□□□□□ -1.32
RN7SKP49-201ENST00000516675 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.82□□□□□ -1.32
RN7SKP49-201ENST00000516675 IRX5P78411 483 aaPredicted RBP6.82□□□□□ -1.32
RN7SKP49-201ENST00000516675 IER5LQ5T953 404 aa6.82□□□□□ -1.32
RN7SKP49-201ENST00000516675 ZFP91Q96JP5 570 aaPredicted RBP6.82□□□□□ -1.32
RN7SKP49-201ENST00000516675 VGFO15240 615 aaPredicted RBP6.8□□□□□ -1.32
RN7SKP49-201ENST00000516675 GOLGA2Q08379 1002 aa6.8□□□□□ -1.32
RN7SKP49-201ENST00000516675 MKRN3Q13064 507 aaKnown RBP6.8□□□□□ -1.32
RN7SKP49-201ENST00000516675 OTUD5Q96G74 571 aa6.79□□□□□ -1.32
RN7SKP49-201ENST00000516675 PLCG2P16885 1265 aa6.78□□□□□ -1.32
RN7SKP49-201ENST00000516675 EFCAB3Q8N7B9 438 aa6.78□□□□□ -1.32
RN7SKP49-201ENST00000516675 PDCD7Q8N8D1 485 aaKnown RBP6.78□□□□□ -1.32
RN7SKP49-201ENST00000516675 BCL11BQ9C0K0 894 aaPredicted RBP6.77□□□□□ -1.33
RN7SKP49-201ENST00000516675 OCEL1Q9H607 264 aa6.77□□□□□ -1.33
RN7SKP49-201ENST00000516675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.76□□□□□ -1.33
RN7SKP49-201ENST00000516675 DPY19L2Q6NUT2 758 aa6.75□□□□□ -1.33
RN7SKP49-201ENST00000516675 STK24Q9Y6E0 443 aa6.75□□□□□ -1.33
RN7SKP49-201ENST00000516675 STK25O00506 426 aa6.74□□□□□ -1.33
RN7SKP49-201ENST00000516675 ILDR1Q86SU0 546 aaPredicted RBP6.73□□□□□ -1.33
RN7SKP49-201ENST00000516675 TAOK2Q9UL54 1235 aa6.73□□□□□ -1.33
RN7SKP49-201ENST00000516675 MAMSTRQ6ZN01 415 aa6.71□□□□□ -1.34
RN7SKP49-201ENST00000516675 PHF8Q9UPP1 1060 aa6.71□□□□□ -1.34
RN7SKP49-201ENST00000516675 SCUBE2Q9NQ36 999 aa6.7□□□□□ -1.34
RN7SKP49-201ENST00000516675 SOX12O15370 315 aa6.69□□□□□ -1.34
RN7SKP49-201ENST00000516675 MS4A4AQ96JQ5 239 aa6.69□□□□□ -1.34
RN7SKP49-201ENST00000516675 RTN4Q9NQC3 1192 aaKnown RBP6.69□□□□□ -1.34
RN7SKP49-201ENST00000516675 CHGAP10645 457 aaKnown RBP6.67□□□□□ -1.34
RN7SKP49-201ENST00000516675 MFRPQ9BY79 579 aa6.67□□□□□ -1.34
RN7SKP49-201ENST00000516675 HS6ST3Q8IZP7 471 aa6.66□□□□□ -1.34
RN7SKP49-201ENST00000516675 L3MBTL3Q96JM7 780 aaPredicted RBP6.66□□□□□ -1.34
RN7SKP49-201ENST00000516675 DCAF8L2P0C7V8 631 aa6.65□□□□□ -1.34
RN7SKP49-201ENST00000516675 SLAIN1Q8ND83 568 aa6.65□□□□□ -1.34
RN7SKP49-201ENST00000516675 FBXO22Q8NEZ5 403 aa6.65□□□□□ -1.34
RN7SKP49-201ENST00000516675 BOLA1Q9Y3E2 137 aa6.65□□□□□ -1.34
RN7SKP49-201ENST00000516675 NLRP6P59044 892 aa6.64□□□□□ -1.35
RN7SKP49-201ENST00000516675 AMER1Q5JTC6 1135 aaPredicted RBP6.64□□□□□ -1.35
RN7SKP49-201ENST00000516675 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.63□□□□□ -1.35
RN7SKP49-201ENST00000516675 NKX1-1Q15270 411 aaPredicted RBP6.62□□□□□ -1.35
RN7SKP49-201ENST00000516675 C3orf67Q6ZVT6 689 aa6.62□□□□□ -1.35
RN7SKP49-201ENST00000516675 TMEM121BQ9BXQ6 578 aaPredicted RBP6.62□□□□□ -1.35
RN7SKP49-201ENST00000516675 G3V3G9 751 aa6.61□□□□□ -1.35
RN7SKP49-201ENST00000516675 MICALL2Q8IY33 904 aa6.61□□□□□ -1.35
RN7SKP49-201ENST00000516675 PPP1R37O75864 691 aa6.59□□□□□ -1.35
RN7SKP49-201ENST00000516675 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP49-201ENST00000516675 TMEM92Q6UXU6 159 aa6.58□□□□□ -1.36
RN7SKP49-201ENST00000516675 FAM163AQ96GL9 167 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP49-201ENST00000516675 DNAJC5Q9H3Z4 198 aa6.57□□□□□ -1.36
RN7SKP49-201ENST00000516675 ST18O60284 1047 aa6.52□□□□□ -1.37
RN7SKP49-201ENST00000516675 GTPBP6O43824 516 aaPredicted RBP6.51□□□□□ -1.37
RN7SKP49-201ENST00000516675 POTEMA6NI47 508 aa6.49□□□□□ -1.37
RN7SKP49-201ENST00000516675 SNPHO15079 494 aa6.49□□□□□ -1.37
RN7SKP49-201ENST00000516675 HOXB3P14651 431 aaPredicted RBP6.49□□□□□ -1.37
RN7SKP49-201ENST00000516675 POTEGQ6S5H5 508 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms