RNA–Protein interactions for RNA: ENST00000511482.1

PDCD6-208, Transcript of programmed cell death 6, humanhuman

TSL 5

Gene PDCD6, Length 878 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-208ENST00000511482 HAX1O00165 279 aa17.44■□□□□ 0.38
PDCD6-208ENST00000511482 C19orf67A6NJJ6 358 aa17.43■□□□□ 0.38
PDCD6-208ENST00000511482 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
PDCD6-208ENST00000511482 NUBP1P53384 320 aa17.37■□□□□ 0.37
PDCD6-208ENST00000511482 CD44P16070 742 aaKnown RBP17.35■□□□□ 0.37
PDCD6-208ENST00000511482 EVX2Q03828 476 aa17.34■□□□□ 0.37
PDCD6-208ENST00000511482 RASEFQ8IZ41 740 aa17.32■□□□□ 0.36
PDCD6-208ENST00000511482 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
PDCD6-208ENST00000511482 SPOCK2Q92563 424 aa17.31■□□□□ 0.36
PDCD6-208ENST00000511482 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
PDCD6-208ENST00000511482 TSPYL2Q9H2G4 693 aaPredicted RBP17.23■□□□□ 0.35
PDCD6-208ENST00000511482 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
PDCD6-208ENST00000511482 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
PDCD6-208ENST00000511482 FAM212AQ96EL1 285 aa17.18■□□□□ 0.34
PDCD6-208ENST00000511482 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
PDCD6-208ENST00000511482 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
PDCD6-208ENST00000511482 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
PDCD6-208ENST00000511482 SP7Q8TDD2 431 aaPredicted RBP17.11■□□□□ 0.33
PDCD6-208ENST00000511482 GSE1Q14687 1217 aa17.09■□□□□ 0.33
PDCD6-208ENST00000511482 PHF12Q96QT6 1004 aa17.07■□□□□ 0.32
PDCD6-208ENST00000511482 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
PDCD6-208ENST00000511482 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
PDCD6-208ENST00000511482 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
PDCD6-208ENST00000511482 SMARCA4P51532 1647 aa17■□□□□ 0.31
PDCD6-208ENST00000511482 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
PDCD6-208ENST00000511482 KIF12Q96FN5 646 aa16.98■□□□□ 0.31
PDCD6-208ENST00000511482 GABBR2O75899 941 aa16.97■□□□□ 0.31
PDCD6-208ENST00000511482 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
PDCD6-208ENST00000511482 PYGBP11216 843 aa16.95■□□□□ 0.3
PDCD6-208ENST00000511482 CLCN6P51797 869 aa16.95■□□□□ 0.3
PDCD6-208ENST00000511482 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
PDCD6-208ENST00000511482 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
PDCD6-208ENST00000511482 MAP3K13O43283 966 aa16.91■□□□□ 0.3
PDCD6-208ENST00000511482 CHRM1P11229 460 aaPredicted RBP16.9■□□□□ 0.3
PDCD6-208ENST00000511482 PKD2Q13563 968 aa16.89■□□□□ 0.29
PDCD6-208ENST00000511482 GALR2O43603 387 aaPredicted RBP16.87■□□□□ 0.29
PDCD6-208ENST00000511482 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
PDCD6-208ENST00000511482 MS4A3Q96HJ5 214 aa16.87■□□□□ 0.29
PDCD6-208ENST00000511482 SGIP1Q9BQI5 828 aa16.85■□□□□ 0.29
PDCD6-208ENST00000511482 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
PDCD6-208ENST00000511482 PCDHB13Q9Y5F0 798 aa16.83■□□□□ 0.28
PDCD6-208ENST00000511482 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
PDCD6-208ENST00000511482 IFNL1Q8IU54 200 aa16.79■□□□□ 0.28
PDCD6-208ENST00000511482 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.28
PDCD6-208ENST00000511482 PCDHB8Q9UN66 801 aa16.74■□□□□ 0.27
PDCD6-208ENST00000511482 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
PDCD6-208ENST00000511482 ZNF467Q7Z7K2 595 aaPredicted RBP16.71■□□□□ 0.27
PDCD6-208ENST00000511482 RNF25Q96BH1 459 aaPredicted RBP16.7■□□□□ 0.26
PDCD6-208ENST00000511482 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
PDCD6-208ENST00000511482 RTN4Q9NQC3 1192 aaKnown RBP16.67■□□□□ 0.26
PDCD6-208ENST00000511482 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
PDCD6-208ENST00000511482 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
PDCD6-208ENST00000511482 DCBLD2Q96PD2 775 aa16.65■□□□□ 0.26
PDCD6-208ENST00000511482 RGL2O15211 777 aa16.63■□□□□ 0.25
PDCD6-208ENST00000511482 RIOK3O14730 519 aaKnown RBP16.62■□□□□ 0.25
PDCD6-208ENST00000511482 TIE1P35590 1138 aa16.62■□□□□ 0.25
PDCD6-208ENST00000511482 BMP2KQ9NSY1 1161 aaPredicted RBP16.61■□□□□ 0.25
PDCD6-208ENST00000511482 WIZO95785 1651 aa16.59■□□□□ 0.25
PDCD6-208ENST00000511482 ASTLQ6HA08 431 aaPredicted RBP16.58■□□□□ 0.24
PDCD6-208ENST00000511482 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
PDCD6-208ENST00000511482 ATMINO43313 823 aaPredicted RBP16.57■□□□□ 0.24
PDCD6-208ENST00000511482 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
PDCD6-208ENST00000511482 PSEN1P49768 467 aa16.56■□□□□ 0.24
PDCD6-208ENST00000511482 PDAP1Q13442 181 aaKnown RBP16.56■□□□□ 0.24
PDCD6-208ENST00000511482 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
PDCD6-208ENST00000511482 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
PDCD6-208ENST00000511482 VGFO15240 615 aaPredicted RBP16.53■□□□□ 0.24
PDCD6-208ENST00000511482 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
PDCD6-208ENST00000511482 ATN1P54259 1190 aaPredicted RBP16.52■□□□□ 0.24
PDCD6-208ENST00000511482 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
PDCD6-208ENST00000511482 NESP48681 1621 aa16.49■□□□□ 0.23
PDCD6-208ENST00000511482 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
PDCD6-208ENST00000511482 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
PDCD6-208ENST00000511482 CUX2O14529 1486 aa16.48■□□□□ 0.23
PDCD6-208ENST00000511482 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-208ENST00000511482 ZFP91Q96JP5 570 aaPredicted RBP16.47■□□□□ 0.23
PDCD6-208ENST00000511482 TAOK2Q9UL54 1235 aa16.46■□□□□ 0.23
PDCD6-208ENST00000511482 TRIM35Q9UPQ4 493 aa16.44■□□□□ 0.22
PDCD6-208ENST00000511482 CFTRP13569 1480 aa16.39■□□□□ 0.21
PDCD6-208ENST00000511482 STK25O00506 426 aa16.34■□□□□ 0.21
PDCD6-208ENST00000511482 SLC39A7Q92504 469 aa16.34■□□□□ 0.21
PDCD6-208ENST00000511482 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
PDCD6-208ENST00000511482 CABP2Q9NPB3 220 aa16.34■□□□□ 0.21
PDCD6-208ENST00000511482 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.2
PDCD6-208ENST00000511482 C7P10643 843 aa16.32■□□□□ 0.2
PDCD6-208ENST00000511482 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
PDCD6-208ENST00000511482 IER5LQ5T953 404 aa16.31■□□□□ 0.2
PDCD6-208ENST00000511482 STK24Q9Y6E0 443 aa16.31■□□□□ 0.2
PDCD6-208ENST00000511482 GOLGA2Q08379 1002 aa16.3■□□□□ 0.2
PDCD6-208ENST00000511482 METRNQ9UJH8 293 aa16.3■□□□□ 0.2
PDCD6-208ENST00000511482 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
PDCD6-208ENST00000511482 HS6ST3Q8IZP7 471 aa16.28■□□□□ 0.2
PDCD6-208ENST00000511482 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
PDCD6-208ENST00000511482 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
PDCD6-208ENST00000511482 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
PDCD6-208ENST00000511482 CHGAP10645 457 aaKnown RBP16.27■□□□□ 0.2
PDCD6-208ENST00000511482 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
PDCD6-208ENST00000511482 EFCAB3Q8N7B9 438 aa16.26■□□□□ 0.19
PDCD6-208ENST00000511482 POTEFA5A3E0 1075 aa16.23■□□□□ 0.19
PDCD6-208ENST00000511482 IRX5P78411 483 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms