RNA–Protein interactions for RNA: ENST00000510027.2

SPINK1-203, Transcript of serine peptidase inhibitor, Kazal type 1, humanhuman

TSL 3 BASIC

Gene SPINK1, Length 1,188 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPINK1-203ENST00000510027 PLCD3Q8N3E9 789 aa17.88■□□□□ 0.45
SPINK1-203ENST00000510027 MNX1P50219 401 aaPredicted RBP17.87■□□□□ 0.45
SPINK1-203ENST00000510027 ERCC6Q03468 1493 aa17.83■□□□□ 0.45
SPINK1-203ENST00000510027 PLEKHG5O94827 1062 aa17.83■□□□□ 0.44
SPINK1-203ENST00000510027 CD44P16070 742 aaKnown RBP17.8■□□□□ 0.44
SPINK1-203ENST00000510027 SP7Q8TDD2 431 aaPredicted RBP17.8■□□□□ 0.44
SPINK1-203ENST00000510027 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.44
SPINK1-203ENST00000510027 NESP48681 1621 aa17.75■□□□□ 0.43
SPINK1-203ENST00000510027 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
SPINK1-203ENST00000510027 VASPP50552 380 aaPredicted RBP17.72■□□□□ 0.43
SPINK1-203ENST00000510027 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
SPINK1-203ENST00000510027 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
SPINK1-203ENST00000510027 ZRANB1Q9UGI0 708 aa17.66■□□□□ 0.42
SPINK1-203ENST00000510027 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
SPINK1-203ENST00000510027 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
SPINK1-203ENST00000510027 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
SPINK1-203ENST00000510027 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
SPINK1-203ENST00000510027 KLHL34Q8N239 644 aa17.56■□□□□ 0.4
SPINK1-203ENST00000510027 TSPYL2Q9H2G4 693 aaPredicted RBP17.56■□□□□ 0.4
SPINK1-203ENST00000510027 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
SPINK1-203ENST00000510027 RASEFQ8IZ41 740 aa17.53■□□□□ 0.4
SPINK1-203ENST00000510027 GABBR2O75899 941 aa17.52■□□□□ 0.4
SPINK1-203ENST00000510027 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
SPINK1-203ENST00000510027 ZNF579Q8NAF0 562 aaKnown RBP17.5■□□□□ 0.39
SPINK1-203ENST00000510027 NUBP1P53384 320 aa17.49■□□□□ 0.39
SPINK1-203ENST00000510027 PHF12Q96QT6 1004 aa17.48■□□□□ 0.39
SPINK1-203ENST00000510027 BAZ1BQ9UIG0 1483 aaKnown RBP17.48■□□□□ 0.39
SPINK1-203ENST00000510027 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
SPINK1-203ENST00000510027 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
SPINK1-203ENST00000510027 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
SPINK1-203ENST00000510027 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
SPINK1-203ENST00000510027 BAZ1AQ9NRL2 1556 aaPredicted RBP17.39■□□□□ 0.37
SPINK1-203ENST00000510027 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
SPINK1-203ENST00000510027 FAM212AQ96EL1 285 aa17.35■□□□□ 0.37
SPINK1-203ENST00000510027 MROH2BQ7Z745 1585 aa17.34■□□□□ 0.37
SPINK1-203ENST00000510027 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
SPINK1-203ENST00000510027 CLCN6P51797 869 aa17.32■□□□□ 0.36
SPINK1-203ENST00000510027 GALR2O43603 387 aaPredicted RBP17.31■□□□□ 0.36
SPINK1-203ENST00000510027 SPOCK2Q92563 424 aa17.31■□□□□ 0.36
SPINK1-203ENST00000510027 WDR62O43379 1518 aa17.26■□□□□ 0.35
SPINK1-203ENST00000510027 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
SPINK1-203ENST00000510027 KIF12Q96FN5 646 aa17.25■□□□□ 0.35
SPINK1-203ENST00000510027 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
SPINK1-203ENST00000510027 MS4A3Q96HJ5 214 aa17.24■□□□□ 0.35
SPINK1-203ENST00000510027 MAP3K13O43283 966 aa17.21■□□□□ 0.35
SPINK1-203ENST00000510027 GSE1Q14687 1217 aa17.17■□□□□ 0.34
SPINK1-203ENST00000510027 DCBLD2Q96PD2 775 aa17.17■□□□□ 0.34
SPINK1-203ENST00000510027 PYGBP11216 843 aa17.16■□□□□ 0.34
SPINK1-203ENST00000510027 CIZ1Q9ULV3 898 aaPredicted RBP17.16■□□□□ 0.34
SPINK1-203ENST00000510027 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
SPINK1-203ENST00000510027 POTEIP0CG38 1075 aa17.15■□□□□ 0.34
SPINK1-203ENST00000510027 WIZO95785 1651 aa17.11■□□□□ 0.33
SPINK1-203ENST00000510027 PCDHB13Q9Y5F0 798 aa17.11■□□□□ 0.33
SPINK1-203ENST00000510027 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
SPINK1-203ENST00000510027 TRPC6Q9Y210 931 aa17.06■□□□□ 0.32
SPINK1-203ENST00000510027 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
SPINK1-203ENST00000510027 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
SPINK1-203ENST00000510027 SGIP1Q9BQI5 828 aa17.03■□□□□ 0.32
SPINK1-203ENST00000510027 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
SPINK1-203ENST00000510027 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
SPINK1-203ENST00000510027 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
SPINK1-203ENST00000510027 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
SPINK1-203ENST00000510027 PCDHB8Q9UN66 801 aa16.97■□□□□ 0.31
SPINK1-203ENST00000510027 ATMINO43313 823 aaPredicted RBP16.95■□□□□ 0.3
SPINK1-203ENST00000510027 CHRM1P11229 460 aaPredicted RBP16.94■□□□□ 0.3
SPINK1-203ENST00000510027 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
SPINK1-203ENST00000510027 CFTRP13569 1480 aa16.93■□□□□ 0.3
SPINK1-203ENST00000510027 ASTLQ6HA08 431 aaPredicted RBP16.93■□□□□ 0.3
SPINK1-203ENST00000510027 PELP1Q8IZL8 1130 aaKnown RBP16.93■□□□□ 0.3
SPINK1-203ENST00000510027 TIE1P35590 1138 aa16.91■□□□□ 0.3
SPINK1-203ENST00000510027 ATN1P54259 1190 aaPredicted RBP16.9■□□□□ 0.3
SPINK1-203ENST00000510027 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
SPINK1-203ENST00000510027 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
SPINK1-203ENST00000510027 TTLL13PA6NNM8 815 aa16.86■□□□□ 0.29
SPINK1-203ENST00000510027 ZNF467Q7Z7K2 595 aaPredicted RBP16.85■□□□□ 0.29
SPINK1-203ENST00000510027 TMEM106CQ9BVX2 250 aa16.84■□□□□ 0.29
SPINK1-203ENST00000510027 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
SPINK1-203ENST00000510027 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
SPINK1-203ENST00000510027 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.28
SPINK1-203ENST00000510027 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.28
SPINK1-203ENST00000510027 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.27
SPINK1-203ENST00000510027 SLC39A7Q92504 469 aa16.76■□□□□ 0.27
SPINK1-203ENST00000510027 METRNQ9UJH8 293 aa16.75■□□□□ 0.27
SPINK1-203ENST00000510027 PSEN1P49768 467 aa16.73■□□□□ 0.27
SPINK1-203ENST00000510027 PKD2Q13563 968 aa16.73■□□□□ 0.27
SPINK1-203ENST00000510027 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
SPINK1-203ENST00000510027 C7P10643 843 aa16.72■□□□□ 0.27
SPINK1-203ENST00000510027 LHX8Q68G74 356 aa16.72■□□□□ 0.27
SPINK1-203ENST00000510027 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
SPINK1-203ENST00000510027 CHD1O14646 1710 aa16.71■□□□□ 0.27
SPINK1-203ENST00000510027 ECM2O94769 699 aaPredicted RBP16.71■□□□□ 0.27
SPINK1-203ENST00000510027 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
SPINK1-203ENST00000510027 RNF25Q96BH1 459 aaPredicted RBP16.7■□□□□ 0.26
SPINK1-203ENST00000510027 PDAP1Q13442 181 aaKnown RBP16.69■□□□□ 0.26
SPINK1-203ENST00000510027 RIOK3O14730 519 aaKnown RBP16.65■□□□□ 0.26
SPINK1-203ENST00000510027 POTEB2H3BUK9 544 aa16.62■□□□□ 0.25
SPINK1-203ENST00000510027 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
SPINK1-203ENST00000510027 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
SPINK1-203ENST00000510027 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
SPINK1-203ENST00000510027 POTEFA5A3E0 1075 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms