RNA–Protein interactions for RNA: ENST00000509855.1

COL6A4P2-205, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 506 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-205ENST00000509855 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
COL6A4P2-205ENST00000509855 RGL2O15211 777 aa15.86■□□□□ 0.13
COL6A4P2-205ENST00000509855 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
COL6A4P2-205ENST00000509855 CCDC61Q9Y6R9 512 aa15.84■□□□□ 0.13
COL6A4P2-205ENST00000509855 C19orf67A6NJJ6 358 aa15.8■□□□□ 0.12
COL6A4P2-205ENST00000509855 CD44P16070 742 aaKnown RBP15.8■□□□□ 0.12
COL6A4P2-205ENST00000509855 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
COL6A4P2-205ENST00000509855 PYGBP11216 843 aa15.78■□□□□ 0.12
COL6A4P2-205ENST00000509855 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
COL6A4P2-205ENST00000509855 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
COL6A4P2-205ENST00000509855 RIOK3O14730 519 aaKnown RBP15.71■□□□□ 0.11
COL6A4P2-205ENST00000509855 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
COL6A4P2-205ENST00000509855 SGIP1Q9BQI5 828 aa15.66■□□□□ 0.1
COL6A4P2-205ENST00000509855 KIF12Q96FN5 646 aa15.65■□□□□ 0.1
COL6A4P2-205ENST00000509855 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
COL6A4P2-205ENST00000509855 ZNF467Q7Z7K2 595 aaPredicted RBP15.64■□□□□ 0.09
COL6A4P2-205ENST00000509855 HAX1O00165 279 aa15.63■□□□□ 0.09
COL6A4P2-205ENST00000509855 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
COL6A4P2-205ENST00000509855 PHF12Q96QT6 1004 aa15.61■□□□□ 0.09
COL6A4P2-205ENST00000509855 MAP3K13O43283 966 aa15.6■□□□□ 0.09
COL6A4P2-205ENST00000509855 PCDHB13Q9Y5F0 798 aa15.58■□□□□ 0.08
COL6A4P2-205ENST00000509855 HS6ST3Q8IZP7 471 aa15.57■□□□□ 0.08
COL6A4P2-205ENST00000509855 EVX2Q03828 476 aa15.55■□□□□ 0.08
COL6A4P2-205ENST00000509855 CHGAP10645 457 aaKnown RBP15.54■□□□□ 0.08
COL6A4P2-205ENST00000509855 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
COL6A4P2-205ENST00000509855 PCDHB8Q9UN66 801 aa15.54■□□□□ 0.08
COL6A4P2-205ENST00000509855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 PDAP1Q13442 181 aaKnown RBP15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 BBXQ8WY36 941 aaPredicted RBP15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 ZFP91Q96JP5 570 aaPredicted RBP15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
COL6A4P2-205ENST00000509855 CLCN6P51797 869 aa15.49■□□□□ 0.07
COL6A4P2-205ENST00000509855 STK25O00506 426 aa15.46■□□□□ 0.07
COL6A4P2-205ENST00000509855 MS4A3Q96HJ5 214 aa15.45■□□□□ 0.06
COL6A4P2-205ENST00000509855 PSEN1P49768 467 aa15.43■□□□□ 0.06
COL6A4P2-205ENST00000509855 BCL11BQ9C0K0 894 aaPredicted RBP15.43■□□□□ 0.06
COL6A4P2-205ENST00000509855 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
COL6A4P2-205ENST00000509855 STK24Q9Y6E0 443 aa15.39■□□□□ 0.05
COL6A4P2-205ENST00000509855 PLCB2Q00722 1185 aa15.37■□□□□ 0.05
COL6A4P2-205ENST00000509855 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
COL6A4P2-205ENST00000509855 TRPC6Q9Y210 931 aa15.34■□□□□ 0.05
COL6A4P2-205ENST00000509855 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
COL6A4P2-205ENST00000509855 TIE1P35590 1138 aa15.31■□□□□ 0.04
COL6A4P2-205ENST00000509855 GABBR2O75899 941 aa15.27■□□□□ 0.04
COL6A4P2-205ENST00000509855 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.04
COL6A4P2-205ENST00000509855 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
COL6A4P2-205ENST00000509855 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
COL6A4P2-205ENST00000509855 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
COL6A4P2-205ENST00000509855 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
COL6A4P2-205ENST00000509855 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
COL6A4P2-205ENST00000509855 CABP2Q9NPB3 220 aa15.22■□□□□ 0.03
COL6A4P2-205ENST00000509855 SP7Q8TDD2 431 aaPredicted RBP15.2■□□□□ 0.02
COL6A4P2-205ENST00000509855 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
COL6A4P2-205ENST00000509855 RYDENQ9NUL5 291 aaKnown RBP15.19■□□□□ 0.02
COL6A4P2-205ENST00000509855 EFCAB3Q8N7B9 438 aa15.18■□□□□ 0.02
COL6A4P2-205ENST00000509855 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
COL6A4P2-205ENST00000509855 SOX12O15370 315 aa15.16■□□□□ 0.02
COL6A4P2-205ENST00000509855 ASTLQ6HA08 431 aaPredicted RBP15.16■□□□□ 0.02
COL6A4P2-205ENST00000509855 MFRPQ9BY79 579 aa15.14■□□□□ 0.01
COL6A4P2-205ENST00000509855 ATMINO43313 823 aaPredicted RBP15.13■□□□□ 0.01
COL6A4P2-205ENST00000509855 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
COL6A4P2-205ENST00000509855 TRIM35Q9UPQ4 493 aa15.11■□□□□ 0.01
COL6A4P2-205ENST00000509855 ATN1P54259 1190 aaPredicted RBP15.1■□□□□ 0.01
COL6A4P2-205ENST00000509855 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
COL6A4P2-205ENST00000509855 NLRP6P59044 892 aa15.08■□□□□ 0
COL6A4P2-205ENST00000509855 MKRN3Q13064 507 aaKnown RBP15.08■□□□□ 0
COL6A4P2-205ENST00000509855 HAP1P54257 671 aaPredicted RBP15.06■□□□□ 0
COL6A4P2-205ENST00000509855 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
COL6A4P2-205ENST00000509855 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
COL6A4P2-205ENST00000509855 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
COL6A4P2-205ENST00000509855 IER5LQ5T953 404 aa15.01□□□□□ -0.01
COL6A4P2-205ENST00000509855 MS4A4AQ96JQ5 239 aa14.99□□□□□ -0.01
COL6A4P2-205ENST00000509855 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
COL6A4P2-205ENST00000509855 TSHZ2Q9NRE2 1034 aa14.97□□□□□ -0.01
COL6A4P2-205ENST00000509855 PELP1Q8IZL8 1130 aaKnown RBP14.96□□□□□ -0.01
COL6A4P2-205ENST00000509855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL6A4P2-205ENST00000509855 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
COL6A4P2-205ENST00000509855 PPP1R37O75864 691 aa14.92□□□□□ -0.02
COL6A4P2-205ENST00000509855 VSIG10Q8N0Z9 540 aa14.92□□□□□ -0.02
COL6A4P2-205ENST00000509855 PDCD7Q8N8D1 485 aaKnown RBP14.92□□□□□ -0.02
COL6A4P2-205ENST00000509855 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
COL6A4P2-205ENST00000509855 OCEL1Q9H607 264 aa14.89□□□□□ -0.03
COL6A4P2-205ENST00000509855 C7P10643 843 aa14.86□□□□□ -0.03
COL6A4P2-205ENST00000509855 PLCG2P16885 1265 aa14.83□□□□□ -0.04
COL6A4P2-205ENST00000509855 KDM2AQ9Y2K7 1162 aa14.83□□□□□ -0.04
COL6A4P2-205ENST00000509855 METRNQ9UJH8 293 aa14.81□□□□□ -0.04
COL6A4P2-205ENST00000509855 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
COL6A4P2-205ENST00000509855 COLQQ9Y215 455 aaPredicted RBP14.8□□□□□ -0.04
COL6A4P2-205ENST00000509855 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
COL6A4P2-205ENST00000509855 SEC24BO95487 1268 aa14.78□□□□□ -0.04
COL6A4P2-205ENST00000509855 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
COL6A4P2-205ENST00000509855 TMEM121BQ9BXQ6 578 aaPredicted RBP14.74□□□□□ -0.05
COL6A4P2-205ENST00000509855 MICALL2Q8IY33 904 aa14.72□□□□□ -0.05
COL6A4P2-205ENST00000509855 BOLA1Q9Y3E2 137 aa14.72□□□□□ -0.05
COL6A4P2-205ENST00000509855 L3MBTL3Q96JM7 780 aaPredicted RBP14.71□□□□□ -0.05
COL6A4P2-205ENST00000509855 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
COL6A4P2-205ENST00000509855 CRISPLD2Q9H0B8 497 aa14.65□□□□□ -0.06
COL6A4P2-205ENST00000509855 G3V3G9 751 aa14.63□□□□□ -0.07
COL6A4P2-205ENST00000509855 PDE4AP27815 886 aa14.6□□□□□ -0.07
COL6A4P2-205ENST00000509855 MFSD10Q14728 455 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms