RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 RRP9O43818 475 aaKnown RBP8.55□□□□□ -1.04
PDE4D-216ENST00000507116 ZNF316A6NFI3 1004 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-216ENST00000507116 MIER1Q8N108 512 aa8.54□□□□□ -1.04
PDE4D-216ENST00000507116 BBXQ8WY36 941 aaPredicted RBP8.54□□□□□ -1.04
PDE4D-216ENST00000507116 CHMP4BQ9H444 224 aaKnown RBP8.53□□□□□ -1.04
PDE4D-216ENST00000507116 HSP90AA2PQ14568 343 aaPredicted RBP8.52□□□□□ -1.05
PDE4D-216ENST00000507116 NBR1Q14596 966 aa8.52□□□□□ -1.05
PDE4D-216ENST00000507116 TEX2Q8IWB9 1127 aa8.5□□□□□ -1.05
PDE4D-216ENST00000507116 ZFP91Q96JP5 570 aaPredicted RBP8.5□□□□□ -1.05
PDE4D-216ENST00000507116 CANXP27824 592 aaKnown RBP8.48□□□□□ -1.05
PDE4D-216ENST00000507116 BCANQ96GW7 911 aa8.48□□□□□ -1.05
PDE4D-216ENST00000507116 NOP58Q9Y2X3 529 aaKnown RBP8.48□□□□□ -1.05
PDE4D-216ENST00000507116 CHIC1Q5VXU3 224 aa8.47□□□□□ -1.05
PDE4D-216ENST00000507116 GTF2E1P29083 439 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-216ENST00000507116 CNGB1Q14028 1251 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-216ENST00000507116 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.05
PDE4D-216ENST00000507116 IRX6P78412 446 aaPredicted RBP8.46□□□□□ -1.06
PDE4D-216ENST00000507116 WASHC2CQ9Y4E1 1318 aa8.45□□□□□ -1.06
PDE4D-216ENST00000507116 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
PDE4D-216ENST00000507116 CALD1Q05682 793 aaKnown RBP8.45□□□□□ -1.06
PDE4D-216ENST00000507116 KCNA4P22459 653 aa8.44□□□□□ -1.06
PDE4D-216ENST00000507116 FAM43AQ8N2R8 423 aa8.44□□□□□ -1.06
PDE4D-216ENST00000507116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDE4D-216ENST00000507116 PRDM4Q9UKN5 801 aa8.43□□□□□ -1.06
PDE4D-216ENST00000507116 SECISBP2LQ93073 1101 aaKnown RBP8.42□□□□□ -1.06
PDE4D-216ENST00000507116 STAC3Q96MF2 364 aa8.42□□□□□ -1.06
PDE4D-216ENST00000507116 POLR3GLQ9BT43 218 aa8.42□□□□□ -1.06
PDE4D-216ENST00000507116 WASHC2AQ641Q2 1341 aa8.42□□□□□ -1.06
PDE4D-216ENST00000507116 NCLP19338 710 aaKnown RBP8.41□□□□□ -1.06
PDE4D-216ENST00000507116 FKBP8Q14318 412 aa8.41□□□□□ -1.06
PDE4D-216ENST00000507116 HSP90AA1P07900 732 aaKnown RBP8.41□□□□□ -1.06
PDE4D-216ENST00000507116 ARID4BQ4LE39 1312 aaPredicted RBP8.4□□□□□ -1.07
PDE4D-216ENST00000507116 USP35Q9P2H5 1018 aa8.39□□□□□ -1.07
PDE4D-216ENST00000507116 BRPF3Q9ULD4 1205 aa8.39□□□□□ -1.07
PDE4D-216ENST00000507116 CENPJQ9HC77 1338 aaPredicted RBP8.38□□□□□ -1.07
PDE4D-216ENST00000507116 PPM1GO15355 546 aaPredicted RBP8.38□□□□□ -1.07
PDE4D-216ENST00000507116 CNPY4Q8N129 248 aa8.38□□□□□ -1.07
PDE4D-216ENST00000507116 CCDC9Q9Y3X0 531 aaKnown RBP8.36□□□□□ -1.07
PDE4D-216ENST00000507116 NEFMP07197 916 aa8.36□□□□□ -1.07
PDE4D-216ENST00000507116 RNF216Q9NWF9 866 aaPredicted RBP8.36□□□□□ -1.07
PDE4D-216ENST00000507116 RGS3P49796 1198 aa8.36□□□□□ -1.07
PDE4D-216ENST00000507116 HMGB1P09429 215 aaKnown RBP8.35□□□□□ -1.07
PDE4D-216ENST00000507116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-216ENST00000507116 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
PDE4D-216ENST00000507116 SHROOM4Q9ULL8 1493 aa8.33□□□□□ -1.08
PDE4D-216ENST00000507116 TICAM2Q86XR7 235 aa8.32□□□□□ -1.08
PDE4D-216ENST00000507116 PAK3O75914 559 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-216ENST00000507116 ITGAEP38570 1179 aa8.31□□□□□ -1.08
PDE4D-216ENST00000507116 WWC1Q8IX03 1113 aa8.31□□□□□ -1.08
PDE4D-216ENST00000507116 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-216ENST00000507116 VGFO15240 615 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-216ENST00000507116 PDCL3Q9H2J4 239 aa8.28□□□□□ -1.08
PDE4D-216ENST00000507116 PRDM10Q9NQV6 1147 aa8.28□□□□□ -1.08
PDE4D-216ENST00000507116 IGSF3O75054 1194 aa8.27□□□□□ -1.09
PDE4D-216ENST00000507116 KCNG1Q9UIX4 513 aa8.26□□□□□ -1.09
PDE4D-216ENST00000507116 CLSTN1O94985 981 aa8.26□□□□□ -1.09
PDE4D-216ENST00000507116 PTMAP06454 111 aaKnown RBP8.26□□□□□ -1.09
PDE4D-216ENST00000507116 FOXD1Q16676 465 aa8.26□□□□□ -1.09
PDE4D-216ENST00000507116 PLCD3Q8N3E9 789 aa8.26□□□□□ -1.09
PDE4D-216ENST00000507116 ZBTB47Q9UFB7 747 aaPredicted RBP8.26□□□□□ -1.09
PDE4D-216ENST00000507116 GSE1Q14687 1217 aa8.25□□□□□ -1.09
PDE4D-216ENST00000507116 PABPN1Q86U42 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
PDE4D-216ENST00000507116 ZNF830Q96NB3 372 aaPredicted RBP8.25□□□□□ -1.09
PDE4D-216ENST00000507116 IPO9Q96P70 1041 aaKnown RBP8.25□□□□□ -1.09
PDE4D-216ENST00000507116 RGS22Q8NE09 1264 aa8.24□□□□□ -1.09
PDE4D-216ENST00000507116 ARID3AQ99856 593 aa8.24□□□□□ -1.09
PDE4D-216ENST00000507116 SUPT5HO00267 1087 aaKnown RBP8.24□□□□□ -1.09
PDE4D-216ENST00000507116 CLGNO14967 610 aa8.24□□□□□ -1.09
PDE4D-216ENST00000507116 UBTFP17480 764 aaKnown RBP8.24□□□□□ -1.09
PDE4D-216ENST00000507116 ANP32AP39687 249 aaKnown RBP8.24□□□□□ -1.09
PDE4D-216ENST00000507116 GRIPAP1Q4V328 841 aa8.24□□□□□ -1.09
PDE4D-216ENST00000507116 ANP32BQ92688 251 aaKnown RBP8.23□□□□□ -1.09
PDE4D-216ENST00000507116 TMEM51Q9NW97 253 aa8.22□□□□□ -1.09
PDE4D-216ENST00000507116 FAM193AP78312 1265 aa8.22□□□□□ -1.09
PDE4D-216ENST00000507116 IRX3P78415 501 aaPredicted RBP8.22□□□□□ -1.09
PDE4D-216ENST00000507116 ZNF592Q92610 1267 aa8.21□□□□□ -1.09
PDE4D-216ENST00000507116 CFAP44Q96MT7 982 aa8.21□□□□□ -1.09
PDE4D-216ENST00000507116 PLCD4Q9BRC7 762 aa8.21□□□□□ -1.09
PDE4D-216ENST00000507116 SMAP1Q8IYB5 467 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-216ENST00000507116 PNNQ9H307 717 aaKnown RBP8.21□□□□□ -1.1
PDE4D-216ENST00000507116 PTMSP20962 102 aa8.19□□□□□ -1.1
PDE4D-216ENST00000507116 MCCP23508 829 aa8.19□□□□□ -1.1
PDE4D-216ENST00000507116 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
PDE4D-216ENST00000507116 ZNF622Q969S3 477 aaKnown RBP eCLIP8.18□□□□□ -1.1
PDE4D-216ENST00000507116 PUS7Q96PZ0 661 aaKnown RBP8.18□□□□□ -1.1
PDE4D-216ENST00000507116 PPP6R1Q9UPN7 881 aa8.18□□□□□ -1.1
PDE4D-216ENST00000507116 MMP14P50281 582 aa8.18□□□□□ -1.1
PDE4D-216ENST00000507116 AXDND1Q5T1B0 1012 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-216ENST00000507116 UTP14CQ5TAP6 766 aaKnown RBP8.17□□□□□ -1.1
PDE4D-216ENST00000507116 TMED8Q6PL24 325 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-216ENST00000507116 TPM2P07951 284 aa8.16□□□□□ -1.1
PDE4D-216ENST00000507116 HDAC5Q9UQL6 1122 aa8.16□□□□□ -1.1
PDE4D-216ENST00000507116 DDRGK1Q96HY6 314 aa8.16□□□□□ -1.1
PDE4D-216ENST00000507116 VGLL3A8MV65 326 aa8.15□□□□□ -1.1
PDE4D-216ENST00000507116 MAP7D2Q96T17 732 aa8.14□□□□□ -1.11
PDE4D-216ENST00000507116 PSMD1Q99460 953 aa8.14□□□□□ -1.11
PDE4D-216ENST00000507116 RRAGDQ9NQL2 400 aaPredicted RBP8.14□□□□□ -1.11
PDE4D-216ENST00000507116 APPP05067 770 aa8.14□□□□□ -1.11
PDE4D-216ENST00000507116 TNNT2P45379 298 aaPredicted RBP8.14□□□□□ -1.11
PDE4D-216ENST00000507116 FAM43BQ6ZT52 329 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms