RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 RGL2O15211 777 aa15.85■□□□□ 0.13
UBE2D3-217ENST00000504211 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
UBE2D3-217ENST00000504211 CCDC61Q9Y6R9 512 aa15.84■□□□□ 0.13
UBE2D3-217ENST00000504211 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
UBE2D3-217ENST00000504211 C19orf67A6NJJ6 358 aa15.81■□□□□ 0.12
UBE2D3-217ENST00000504211 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-217ENST00000504211 PYGBP11216 843 aa15.77■□□□□ 0.12
UBE2D3-217ENST00000504211 ZRANB1Q9UGI0 708 aa15.74■□□□□ 0.11
UBE2D3-217ENST00000504211 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
UBE2D3-217ENST00000504211 RIOK3O14730 519 aaKnown RBP15.71■□□□□ 0.11
UBE2D3-217ENST00000504211 POTEHQ6S545 545 aa15.69■□□□□ 0.1
UBE2D3-217ENST00000504211 ZNF579Q8NAF0 562 aaKnown RBP15.68■□□□□ 0.1
UBE2D3-217ENST00000504211 KIF12Q96FN5 646 aa15.66■□□□□ 0.1
UBE2D3-217ENST00000504211 ZNF467Q7Z7K2 595 aaPredicted RBP15.64■□□□□ 0.09
UBE2D3-217ENST00000504211 SGIP1Q9BQI5 828 aa15.64■□□□□ 0.09
UBE2D3-217ENST00000504211 TAOK2Q9UL54 1235 aa15.64■□□□□ 0.09
UBE2D3-217ENST00000504211 HAX1O00165 279 aa15.63■□□□□ 0.09
UBE2D3-217ENST00000504211 PHF12Q96QT6 1004 aa15.62■□□□□ 0.09
UBE2D3-217ENST00000504211 VGFO15240 615 aaPredicted RBP15.61■□□□□ 0.09
UBE2D3-217ENST00000504211 MAP3K13O43283 966 aa15.6■□□□□ 0.09
UBE2D3-217ENST00000504211 PCDHB13Q9Y5F0 798 aa15.58■□□□□ 0.08
UBE2D3-217ENST00000504211 HS6ST3Q8IZP7 471 aa15.56■□□□□ 0.08
UBE2D3-217ENST00000504211 EVX2Q03828 476 aa15.55■□□□□ 0.08
UBE2D3-217ENST00000504211 PCDHB8Q9UN66 801 aa15.55■□□□□ 0.08
UBE2D3-217ENST00000504211 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
UBE2D3-217ENST00000504211 CHGAP10645 457 aaKnown RBP15.53■□□□□ 0.08
UBE2D3-217ENST00000504211 PDAP1Q13442 181 aaKnown RBP15.51■□□□□ 0.07
UBE2D3-217ENST00000504211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
UBE2D3-217ENST00000504211 ZFP91Q96JP5 570 aaPredicted RBP15.5■□□□□ 0.07
UBE2D3-217ENST00000504211 BBXQ8WY36 941 aaPredicted RBP15.48■□□□□ 0.07
UBE2D3-217ENST00000504211 CLCN6P51797 869 aa15.47■□□□□ 0.07
UBE2D3-217ENST00000504211 MS4A3Q96HJ5 214 aa15.47■□□□□ 0.07
UBE2D3-217ENST00000504211 DNAJC5Q9H3Z4 198 aa15.47■□□□□ 0.07
UBE2D3-217ENST00000504211 STK25O00506 426 aa15.45■□□□□ 0.06
UBE2D3-217ENST00000504211 PSEN1P49768 467 aa15.44■□□□□ 0.06
UBE2D3-217ENST00000504211 BCL11BQ9C0K0 894 aaPredicted RBP15.42■□□□□ 0.06
UBE2D3-217ENST00000504211 STK24Q9Y6E0 443 aa15.39■□□□□ 0.05
UBE2D3-217ENST00000504211 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3-217ENST00000504211 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-217ENST00000504211 PLCB2Q00722 1185 aa15.35■□□□□ 0.05
UBE2D3-217ENST00000504211 TRPC6Q9Y210 931 aa15.34■□□□□ 0.05
UBE2D3-217ENST00000504211 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-217ENST00000504211 TIE1P35590 1138 aa15.31■□□□□ 0.04
UBE2D3-217ENST00000504211 GABBR2O75899 941 aa15.28■□□□□ 0.04
UBE2D3-217ENST00000504211 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.04
UBE2D3-217ENST00000504211 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
UBE2D3-217ENST00000504211 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-217ENST00000504211 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
UBE2D3-217ENST00000504211 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
UBE2D3-217ENST00000504211 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
UBE2D3-217ENST00000504211 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
UBE2D3-217ENST00000504211 SP7Q8TDD2 431 aaPredicted RBP15.21■□□□□ 0.03
UBE2D3-217ENST00000504211 GTPBP6O43824 516 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-217ENST00000504211 EFCAB3Q8N7B9 438 aa15.18■□□□□ 0.02
UBE2D3-217ENST00000504211 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
UBE2D3-217ENST00000504211 RYDENQ9NUL5 291 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-217ENST00000504211 ASTLQ6HA08 431 aaPredicted RBP15.16■□□□□ 0.02
UBE2D3-217ENST00000504211 SOX12O15370 315 aa15.14■□□□□ 0.01
UBE2D3-217ENST00000504211 ATMINO43313 823 aaPredicted RBP15.14■□□□□ 0.01
UBE2D3-217ENST00000504211 MFRPQ9BY79 579 aa15.14■□□□□ 0.01
UBE2D3-217ENST00000504211 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
UBE2D3-217ENST00000504211 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
UBE2D3-217ENST00000504211 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
UBE2D3-217ENST00000504211 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
UBE2D3-217ENST00000504211 MKRN3Q13064 507 aaKnown RBP15.08■□□□□ 0
UBE2D3-217ENST00000504211 NLRP6P59044 892 aa15.07■□□□□ 0
UBE2D3-217ENST00000504211 DCBLD2Q96PD2 775 aa15.06■□□□□ 0
UBE2D3-217ENST00000504211 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
UBE2D3-217ENST00000504211 HAP1P54257 671 aaPredicted RBP15.04■□□□□ -0
UBE2D3-217ENST00000504211 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
UBE2D3-217ENST00000504211 IER5LQ5T953 404 aa15.02■□□□□ -0
UBE2D3-217ENST00000504211 MS4A4AQ96JQ5 239 aa15□□□□□ -0.01
UBE2D3-217ENST00000504211 POTEIP0CG38 1075 aa14.98□□□□□ -0.01
UBE2D3-217ENST00000504211 PELP1Q8IZL8 1130 aaKnown RBP14.97□□□□□ -0.01
UBE2D3-217ENST00000504211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.97□□□□□ -0.01
UBE2D3-217ENST00000504211 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
UBE2D3-217ENST00000504211 IRX5P78411 483 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-217ENST00000504211 PPP1R37O75864 691 aa14.92□□□□□ -0.02
UBE2D3-217ENST00000504211 PDCD7Q8N8D1 485 aaKnown RBP14.91□□□□□ -0.02
UBE2D3-217ENST00000504211 SLC39A7Q92504 469 aa14.91□□□□□ -0.02
UBE2D3-217ENST00000504211 VSIG10Q8N0Z9 540 aa14.89□□□□□ -0.03
UBE2D3-217ENST00000504211 OCEL1Q9H607 264 aa14.88□□□□□ -0.03
UBE2D3-217ENST00000504211 C7P10643 843 aa14.86□□□□□ -0.03
UBE2D3-217ENST00000504211 PLCG2P16885 1265 aa14.84□□□□□ -0.03
UBE2D3-217ENST00000504211 METRNQ9UJH8 293 aa14.83□□□□□ -0.04
UBE2D3-217ENST00000504211 DPY19L2Q6NUT2 758 aa14.81□□□□□ -0.04
UBE2D3-217ENST00000504211 COLQQ9Y215 455 aaPredicted RBP14.81□□□□□ -0.04
UBE2D3-217ENST00000504211 POTEFA5A3E0 1075 aa14.8□□□□□ -0.04
UBE2D3-217ENST00000504211 KDM2AQ9Y2K7 1162 aa14.8□□□□□ -0.04
UBE2D3-217ENST00000504211 SEC24BO95487 1268 aa14.78□□□□□ -0.04
UBE2D3-217ENST00000504211 CADPS2Q86UW7 1296 aa14.77□□□□□ -0.05
UBE2D3-217ENST00000504211 TMEM121BQ9BXQ6 578 aaPredicted RBP14.74□□□□□ -0.05
UBE2D3-217ENST00000504211 MICALL2Q8IY33 904 aa14.73□□□□□ -0.05
UBE2D3-217ENST00000504211 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.05
UBE2D3-217ENST00000504211 L3MBTL3Q96JM7 780 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-217ENST00000504211 CRISPLD2Q9H0B8 497 aa14.65□□□□□ -0.06
UBE2D3-217ENST00000504211 NCKAP5LQ9HCH0 1330 aa14.65□□□□□ -0.06
UBE2D3-217ENST00000504211 G3V3G9 751 aa14.64□□□□□ -0.07
UBE2D3-217ENST00000504211 PDE4AP27815 886 aa14.59□□□□□ -0.07
UBE2D3-217ENST00000504211 MFSD10Q14728 455 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms