RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
NFKB1-203ENST00000502367 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
NFKB1-203ENST00000502367 SPOCK2Q92563 424 aa14.36□□□□□ -0.11
NFKB1-203ENST00000502367 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
NFKB1-203ENST00000502367 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
NFKB1-203ENST00000502367 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.13
NFKB1-203ENST00000502367 MAP3K13O43283 966 aa14.26□□□□□ -0.13
NFKB1-203ENST00000502367 PYGBP11216 843 aa14.26□□□□□ -0.13
NFKB1-203ENST00000502367 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
NFKB1-203ENST00000502367 MS4A3Q96HJ5 214 aa14.24□□□□□ -0.13
NFKB1-203ENST00000502367 TRPC6Q9Y210 931 aa14.2□□□□□ -0.14
NFKB1-203ENST00000502367 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
NFKB1-203ENST00000502367 GSE1Q14687 1217 aa14.17□□□□□ -0.14
NFKB1-203ENST00000502367 PCDHB13Q9Y5F0 798 aa14.13□□□□□ -0.15
NFKB1-203ENST00000502367 IFNL1Q8IU54 200 aa14.12□□□□□ -0.15
NFKB1-203ENST00000502367 PCDHB8Q9UN66 801 aa14.11□□□□□ -0.15
NFKB1-203ENST00000502367 DCBLD2Q96PD2 775 aa14.08□□□□□ -0.16
NFKB1-203ENST00000502367 CLCN6P51797 869 aa14.06□□□□□ -0.16
NFKB1-203ENST00000502367 PKD2Q13563 968 aa14.03□□□□□ -0.16
NFKB1-203ENST00000502367 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
NFKB1-203ENST00000502367 CHRM1P11229 460 aaPredicted RBP14□□□□□ -0.17
NFKB1-203ENST00000502367 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
NFKB1-203ENST00000502367 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
NFKB1-203ENST00000502367 ATMINO43313 823 aaPredicted RBP13.97□□□□□ -0.17
NFKB1-203ENST00000502367 ATN1P54259 1190 aaPredicted RBP13.97□□□□□ -0.17
NFKB1-203ENST00000502367 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.17
NFKB1-203ENST00000502367 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
NFKB1-203ENST00000502367 ECM2O94769 699 aaPredicted RBP13.93□□□□□ -0.18
NFKB1-203ENST00000502367 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
NFKB1-203ENST00000502367 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
NFKB1-203ENST00000502367 TIE1P35590 1138 aa13.9□□□□□ -0.18
NFKB1-203ENST00000502367 ZNF467Q7Z7K2 595 aaPredicted RBP13.89□□□□□ -0.19
NFKB1-203ENST00000502367 RGL2O15211 777 aa13.87□□□□□ -0.19
NFKB1-203ENST00000502367 PSEN1P49768 467 aa13.86□□□□□ -0.19
NFKB1-203ENST00000502367 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
NFKB1-203ENST00000502367 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
NFKB1-203ENST00000502367 RIOK3O14730 519 aaKnown RBP13.8□□□□□ -0.2
NFKB1-203ENST00000502367 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
NFKB1-203ENST00000502367 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
NFKB1-203ENST00000502367 METRNQ9UJH8 293 aa13.77□□□□□ -0.21
NFKB1-203ENST00000502367 POTEB2H3BUK9 544 aa13.76□□□□□ -0.21
NFKB1-203ENST00000502367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-203ENST00000502367 ZFP91Q96JP5 570 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-203ENST00000502367 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-203ENST00000502367 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
NFKB1-203ENST00000502367 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
NFKB1-203ENST00000502367 SLC39A7Q92504 469 aa13.72□□□□□ -0.21
NFKB1-203ENST00000502367 C7P10643 843 aa13.7□□□□□ -0.22
NFKB1-203ENST00000502367 VGFO15240 615 aaPredicted RBP13.69□□□□□ -0.22
NFKB1-203ENST00000502367 LHX8Q68G74 356 aa13.68□□□□□ -0.22
NFKB1-203ENST00000502367 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
NFKB1-203ENST00000502367 SEC24BO95487 1268 aa13.64□□□□□ -0.23
NFKB1-203ENST00000502367 EFCAB3Q8N7B9 438 aa13.64□□□□□ -0.23
NFKB1-203ENST00000502367 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-203ENST00000502367 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
NFKB1-203ENST00000502367 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-203ENST00000502367 STK24Q9Y6E0 443 aa13.62□□□□□ -0.23
NFKB1-203ENST00000502367 STK25O00506 426 aa13.61□□□□□ -0.23
NFKB1-203ENST00000502367 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
NFKB1-203ENST00000502367 IER5LQ5T953 404 aa13.59□□□□□ -0.23
NFKB1-203ENST00000502367 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
NFKB1-203ENST00000502367 DPY19L2Q6NUT2 758 aa13.57□□□□□ -0.24
NFKB1-203ENST00000502367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.248e-7■□□□□ 8.8
NFKB1-203ENST00000502367 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
NFKB1-203ENST00000502367 PLCG2P16885 1265 aa13.55□□□□□ -0.24
NFKB1-203ENST00000502367 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
NFKB1-203ENST00000502367 OCEL1Q9H607 264 aa13.54□□□□□ -0.24
NFKB1-203ENST00000502367 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
NFKB1-203ENST00000502367 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
NFKB1-203ENST00000502367 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
NFKB1-203ENST00000502367 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
NFKB1-203ENST00000502367 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-203ENST00000502367 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
NFKB1-203ENST00000502367 MFRPQ9BY79 579 aa13.44□□□□□ -0.26
NFKB1-203ENST00000502367 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
NFKB1-203ENST00000502367 SOX12O15370 315 aa13.41□□□□□ -0.26
NFKB1-203ENST00000502367 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-203ENST00000502367 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
NFKB1-203ENST00000502367 NLRP6P59044 892 aa13.34□□□□□ -0.27
NFKB1-203ENST00000502367 PPP1R37O75864 691 aa13.33□□□□□ -0.28
NFKB1-203ENST00000502367 NISCHQ9Y2I1 1504 aa13.33□□□□□ -0.28
NFKB1-203ENST00000502367 SCUBE2Q9NQ36 999 aa13.31□□□□□ -0.28
NFKB1-203ENST00000502367 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
NFKB1-203ENST00000502367 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
NFKB1-203ENST00000502367 MAMSTRQ6ZN01 415 aa13.29□□□□□ -0.28
NFKB1-203ENST00000502367 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
NFKB1-203ENST00000502367 MICALL2Q8IY33 904 aa13.25□□□□□ -0.29
NFKB1-203ENST00000502367 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-203ENST00000502367 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
NFKB1-203ENST00000502367 G3V3G9 751 aa13.22□□□□□ -0.29
NFKB1-203ENST00000502367 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
NFKB1-203ENST00000502367 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
NFKB1-203ENST00000502367 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.29
NFKB1-203ENST00000502367 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
NFKB1-203ENST00000502367 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-203ENST00000502367 FAM163AQ96GL9 167 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-203ENST00000502367 LCE2DQ5TA82 110 aaPredicted RBP13.07□□□□□ -0.32
NFKB1-203ENST00000502367 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
NFKB1-203ENST00000502367 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
NFKB1-203ENST00000502367 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms