RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
SPTA1-209ENST00000498708 CYB5RLQ6IPT4 315 aa11.21□□□□□ -0.61
SPTA1-209ENST00000498708 ARHGEF11O15085 1522 aa11.2□□□□□ -0.62
SPTA1-209ENST00000498708 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
SPTA1-209ENST00000498708 SPDYE1Q8NFV5 336 aaPredicted RBP11.19□□□□□ -0.62
SPTA1-209ENST00000498708 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
SPTA1-209ENST00000498708 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPTA1-209ENST00000498708 PEG3Q9GZU2 1588 aa11.15□□□□□ -0.62
SPTA1-209ENST00000498708 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
SPTA1-209ENST00000498708 CEP164Q9UPV0 1460 aa11.1□□□□□ -0.63
SPTA1-209ENST00000498708 ARAP1Q96P48 1450 aa11.07□□□□□ -0.64
SPTA1-209ENST00000498708 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
SPTA1-209ENST00000498708 MROH2BQ7Z745 1585 aa11.05□□□□□ -0.64
SPTA1-209ENST00000498708 URB2Q14146 1524 aaKnown RBP11.03□□□□□ -0.64
SPTA1-209ENST00000498708 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.65
SPTA1-209ENST00000498708 ZNF608Q9ULD9 1512 aaPredicted RBP11.01□□□□□ -0.65
SPTA1-209ENST00000498708 HAX1O00165 279 aa11.01□□□□□ -0.65
SPTA1-209ENST00000498708 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
SPTA1-209ENST00000498708 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
SPTA1-209ENST00000498708 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
SPTA1-209ENST00000498708 CHD1O14646 1710 aa10.94□□□□□ -0.66
SPTA1-209ENST00000498708 CFTRP13569 1480 aa10.93□□□□□ -0.66
SPTA1-209ENST00000498708 SPDYE4A6NLX3 237 aa10.92□□□□□ -0.66
SPTA1-209ENST00000498708 WIZO95785 1651 aa10.9□□□□□ -0.66
SPTA1-209ENST00000498708 IFT140Q96RY7 1462 aa10.9□□□□□ -0.66
SPTA1-209ENST00000498708 RSF1Q96T23 1441 aaPredicted RBP10.9□□□□□ -0.66
SPTA1-209ENST00000498708 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
SPTA1-209ENST00000498708 EIF4G3O43432 1585 aaKnown RBP10.87□□□□□ -0.67
SPTA1-209ENST00000498708 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
SPTA1-209ENST00000498708 AQRO60306 1485 aaKnown RBP eCLIP10.84□□□□□ -0.679e-6■□□□□ 10.2
SPTA1-209ENST00000498708 C19orf67A6NJJ6 358 aa10.8□□□□□ -0.68
SPTA1-209ENST00000498708 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
SPTA1-209ENST00000498708 EVX2Q03828 476 aa10.78□□□□□ -0.68
SPTA1-209ENST00000498708 CLASP1Q7Z460 1538 aa10.78□□□□□ -0.68
SPTA1-209ENST00000498708 PRDM2Q13029 1718 aa10.75□□□□□ -0.69
SPTA1-209ENST00000498708 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
SPTA1-209ENST00000498708 TARBP1Q13395 1621 aaKnown RBP10.75□□□□□ -0.69
SPTA1-209ENST00000498708 KDM4FA0A1W2PPD8 638 aa10.74□□□□□ -0.69
SPTA1-209ENST00000498708 GAPVD1Q14C86 1478 aa10.71□□□□□ -0.69
SPTA1-209ENST00000498708 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
SPTA1-209ENST00000498708 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
SPTA1-209ENST00000498708 SNAPC4Q5SXM2 1469 aa10.68□□□□□ -0.7
SPTA1-209ENST00000498708 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
SPTA1-209ENST00000498708 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
SPTA1-209ENST00000498708 DNMBPQ6XZF7 1577 aa10.67□□□□□ -0.7
SPTA1-209ENST00000498708 KIF13AQ9H1H9 1805 aa10.67□□□□□ -0.7
SPTA1-209ENST00000498708 ABCC8Q09428 1581 aa10.66□□□□□ -0.7
SPTA1-209ENST00000498708 CD44P16070 742 aaKnown RBP10.66□□□□□ -0.7
SPTA1-209ENST00000498708 PROM2Q8N271 834 aa10.66□□□□□ -0.7
SPTA1-209ENST00000498708 RAD54L2Q9Y4B4 1467 aa10.66□□□□□ -0.7
SPTA1-209ENST00000498708 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.7
SPTA1-209ENST00000498708 POLA1P09884 1462 aaPredicted RBP10.64□□□□□ -0.71
SPTA1-209ENST00000498708 ERCC6L2Q5T890 1561 aa10.63□□□□□ -0.71
SPTA1-209ENST00000498708 GABBR2O75899 941 aa10.61□□□□□ -0.71
SPTA1-209ENST00000498708 CLCN6P51797 869 aa10.61□□□□□ -0.71
SPTA1-209ENST00000498708 SOGA1O94964 1423 aa10.59□□□□□ -0.71
SPTA1-209ENST00000498708 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
SPTA1-209ENST00000498708 MAGI1Q96QZ7 1491 aaPredicted RBP10.58□□□□□ -0.72
SPTA1-209ENST00000498708 SYNJ2O15056 1496 aa10.57□□□□□ -0.72
SPTA1-209ENST00000498708 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPTA1-209ENST00000498708 FAM69CQ0P6D2 419 aa10.54□□□□□ -0.72
SPTA1-209ENST00000498708 GRIN2BQ13224 1484 aa10.54□□□□□ -0.72
SPTA1-209ENST00000498708 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
SPTA1-209ENST00000498708 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
SPTA1-209ENST00000498708 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
SPTA1-209ENST00000498708 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
SPTA1-209ENST00000498708 HECW2Q9P2P5 1572 aa10.51□□□□□ -0.73
SPTA1-209ENST00000498708 KDM6BO15054 1643 aa10.5□□□□□ -0.73
SPTA1-209ENST00000498708 FGD5Q6ZNL6 1462 aa10.49□□□□□ -0.73
SPTA1-209ENST00000498708 CEP170Q5SW79 1584 aa10.49□□□□□ -0.73
SPTA1-209ENST00000498708 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
SPTA1-209ENST00000498708 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
SPTA1-209ENST00000498708 FBXO41Q8TF61 875 aa10.49□□□□□ -0.73
SPTA1-209ENST00000498708 ABCC10Q5T3U5 1492 aa10.49□□□□□ -0.73
SPTA1-209ENST00000498708 PBRM1Q86U86 1689 aa10.47□□□□□ -0.73
SPTA1-209ENST00000498708 TSPOAP1O95153 1857 aa10.46□□□□□ -0.74
SPTA1-209ENST00000498708 ADGRL1O94910 1474 aa10.45□□□□□ -0.74
SPTA1-209ENST00000498708 FKBP8Q14318 412 aa10.45□□□□□ -0.74
SPTA1-209ENST00000498708 DIP2BQ9P265 1576 aa10.44□□□□□ -0.74
SPTA1-209ENST00000498708 MIER1Q8N108 512 aa10.43□□□□□ -0.74
SPTA1-209ENST00000498708 SHROOM2Q13796 1616 aa10.43□□□□□ -0.74
SPTA1-209ENST00000498708 GRIN2AQ12879 1464 aa10.41□□□□□ -0.74
SPTA1-209ENST00000498708 CUX1P39880 1505 aa10.4□□□□□ -0.74
SPTA1-209ENST00000498708 NUP160Q12769 1436 aa10.4□□□□□ -0.75
SPTA1-209ENST00000498708 LMTK3Q96Q04 1460 aa10.39□□□□□ -0.75
SPTA1-209ENST00000498708 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
SPTA1-209ENST00000498708 MAPKBP1O60336 1514 aa10.38□□□□□ -0.75
SPTA1-209ENST00000498708 ABCA5Q8WWZ7 1642 aa10.36□□□□□ -0.75
SPTA1-209ENST00000498708 PRG4Q92954 1404 aaPredicted RBP10.36□□□□□ -0.75
SPTA1-209ENST00000498708 ILDR2Q71H61 639 aa10.36□□□□□ -0.75
SPTA1-209ENST00000498708 PLCD3Q8N3E9 789 aa10.36□□□□□ -0.75
SPTA1-209ENST00000498708 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
SPTA1-209ENST00000498708 POTEIP0CG38 1075 aa10.34□□□□□ -0.75
SPTA1-209ENST00000498708 ZBTB47Q9UFB7 747 aaPredicted RBP10.34□□□□□ -0.75
SPTA1-209ENST00000498708 ADCY10Q96PN6 1610 aa10.33□□□□□ -0.76
SPTA1-209ENST00000498708 SOCS7O14512 581 aa10.33□□□□□ -0.76
SPTA1-209ENST00000498708 ADAMTS12P58397 1594 aa10.32□□□□□ -0.76
SPTA1-209ENST00000498708 GALR2O43603 387 aaPredicted RBP10.32□□□□□ -0.76
SPTA1-209ENST00000498708 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
SPTA1-209ENST00000498708 TSPYL2Q9H2G4 693 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms