RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 NPM1P06748 294 aaKnown RBP eCLIP12.81□□□□□ -0.36
ITGA6-211ENST00000497107 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
ITGA6-211ENST00000497107 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
ITGA6-211ENST00000497107 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
ITGA6-211ENST00000497107 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
ITGA6-211ENST00000497107 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.37
ITGA6-211ENST00000497107 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
ITGA6-211ENST00000497107 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
ITGA6-211ENST00000497107 C7P10643 843 aa12.72□□□□□ -0.37
ITGA6-211ENST00000497107 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
ITGA6-211ENST00000497107 LCE2DQ5TA82 110 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-211ENST00000497107 MAMSTRQ6ZN01 415 aa12.64□□□□□ -0.39
ITGA6-211ENST00000497107 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
ITGA6-211ENST00000497107 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
ITGA6-211ENST00000497107 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
ITGA6-211ENST00000497107 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
ITGA6-211ENST00000497107 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
ITGA6-211ENST00000497107 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
ITGA6-211ENST00000497107 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
ITGA6-211ENST00000497107 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
ITGA6-211ENST00000497107 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
ITGA6-211ENST00000497107 FAM163AQ96GL9 167 aaPredicted RBP12.53□□□□□ -0.4
ITGA6-211ENST00000497107 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
ITGA6-211ENST00000497107 MIER1Q8N108 512 aa12.52□□□□□ -0.41
ITGA6-211ENST00000497107 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
ITGA6-211ENST00000497107 MAP3K13O43283 966 aa12.45□□□□□ -0.42
ITGA6-211ENST00000497107 TIE1P35590 1138 aa12.45□□□□□ -0.42
ITGA6-211ENST00000497107 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
ITGA6-211ENST00000497107 COLQQ9Y215 455 aaPredicted RBP12.41□□□□□ -0.42
ITGA6-211ENST00000497107 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
ITGA6-211ENST00000497107 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
ITGA6-211ENST00000497107 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
ITGA6-211ENST00000497107 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
ITGA6-211ENST00000497107 SEC24BO95487 1268 aa12.31□□□□□ -0.44
ITGA6-211ENST00000497107 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
ITGA6-211ENST00000497107 IER5LQ5T953 404 aa12.3□□□□□ -0.44
ITGA6-211ENST00000497107 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
ITGA6-211ENST00000497107 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
ITGA6-211ENST00000497107 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
ITGA6-211ENST00000497107 ST18O60284 1047 aa12.22□□□□□ -0.45
ITGA6-211ENST00000497107 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
ITGA6-211ENST00000497107 SLAIN1Q8ND83 568 aa12.2□□□□□ -0.46
ITGA6-211ENST00000497107 NUBP1P53384 320 aa12.19□□□□□ -0.46
ITGA6-211ENST00000497107 IFNL1Q8IU54 200 aa12.18□□□□□ -0.46
ITGA6-211ENST00000497107 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
ITGA6-211ENST00000497107 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
ITGA6-211ENST00000497107 TMEM106CQ9BVX2 250 aa12.12□□□□□ -0.47
ITGA6-211ENST00000497107 GSE1Q14687 1217 aa12.11□□□□□ -0.47
ITGA6-211ENST00000497107 PLCG2P16885 1265 aa12.09□□□□□ -0.47
ITGA6-211ENST00000497107 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
ITGA6-211ENST00000497107 MMRN1Q13201 1228 aa12.06□□□□□ -0.48
ITGA6-211ENST00000497107 SPNS2Q8IVW8 549 aa12.05□□□□□ -0.48
ITGA6-211ENST00000497107 TMEM121BQ9BXQ6 578 aaPredicted RBP12.04□□□□□ -0.48
ITGA6-211ENST00000497107 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
ITGA6-211ENST00000497107 TRIM41Q8WV44 630 aa12□□□□□ -0.49
ITGA6-211ENST00000497107 OCEL1Q9H607 264 aa12□□□□□ -0.49
ITGA6-211ENST00000497107 SNPHO15079 494 aa11.94□□□□□ -0.5
ITGA6-211ENST00000497107 MARVELD3Q96A59 401 aa11.94□□□□□ -0.5
ITGA6-211ENST00000497107 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
ITGA6-211ENST00000497107 CHRM1P11229 460 aaPredicted RBP11.93□□□□□ -0.5
ITGA6-211ENST00000497107 PYGBP11216 843 aa11.91□□□□□ -0.5
ITGA6-211ENST00000497107 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
ITGA6-211ENST00000497107 PKD2Q13563 968 aa11.88□□□□□ -0.51
ITGA6-211ENST00000497107 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
ITGA6-211ENST00000497107 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
ITGA6-211ENST00000497107 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
ITGA6-211ENST00000497107 POTEB3A0JP26 581 aa11.82□□□□□ -0.52
ITGA6-211ENST00000497107 POTEBQ6S5H4 581 aa11.82□□□□□ -0.52
ITGA6-211ENST00000497107 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
ITGA6-211ENST00000497107 KRTAP3-3Q9BYR6 98 aa11.82□□□□□ -0.52
ITGA6-211ENST00000497107 KRTAP3-2Q9BYR7 98 aa11.82□□□□□ -0.52
ITGA6-211ENST00000497107 EMP3P54852 163 aa11.79□□□□□ -0.52
ITGA6-211ENST00000497107 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
ITGA6-211ENST00000497107 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.53
ITGA6-211ENST00000497107 HS3ST6Q96QI5 342 aa11.77□□□□□ -0.53
ITGA6-211ENST00000497107 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
ITGA6-211ENST00000497107 RIOK3O14730 519 aaKnown RBP11.74□□□□□ -0.53
ITGA6-211ENST00000497107 L3MBTL3Q96JM7 780 aaPredicted RBP11.74□□□□□ -0.53
ITGA6-211ENST00000497107 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
ITGA6-211ENST00000497107 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.53
ITGA6-211ENST00000497107 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.53
ITGA6-211ENST00000497107 RGL2O15211 777 aa11.7□□□□□ -0.54
ITGA6-211ENST00000497107 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
ITGA6-211ENST00000497107 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
ITGA6-211ENST00000497107 PDAP1Q13442 181 aaKnown RBP11.69□□□□□ -0.54
ITGA6-211ENST00000497107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.544e-7■■■□□ 16.1
ITGA6-211ENST00000497107 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
ITGA6-211ENST00000497107 PSEN1P49768 467 aa11.65□□□□□ -0.54
ITGA6-211ENST00000497107 HOXB3P14651 431 aaPredicted RBP11.62□□□□□ -0.55
ITGA6-211ENST00000497107 DPY19L2Q6NUT2 758 aa11.62□□□□□ -0.55
ITGA6-211ENST00000497107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
ITGA6-211ENST00000497107 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
ITGA6-211ENST00000497107 DCAF8L2P0C7V8 631 aa11.57□□□□□ -0.56
ITGA6-211ENST00000497107 CCDC180Q9P1Z9 1646 aa11.56□□□□□ -0.56
ITGA6-211ENST00000497107 HOXB1P14653 301 aaPredicted RBP11.55□□□□□ -0.56
ITGA6-211ENST00000497107 STK25O00506 426 aa11.54□□□□□ -0.56
ITGA6-211ENST00000497107 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
ITGA6-211ENST00000497107 BCL11BQ9C0K0 894 aaPredicted RBP11.52□□□□□ -0.57
ITGA6-211ENST00000497107 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
ITGA6-211ENST00000497107 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms