RNA–Protein interactions for RNA: ENST00000493385.5

CUTC-204, Transcript of cutC copper transporter, humanhuman

TSL 3

Gene CUTC, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTC-204ENST00000493385 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
CUTC-204ENST00000493385 THOC2Q8NI27 1593 aaKnown RBP12.61□□□□□ -0.39
CUTC-204ENST00000493385 CFTRP13569 1480 aa12.6□□□□□ -0.39
CUTC-204ENST00000493385 KIF21AQ7Z4S6 1674 aa12.59□□□□□ -0.39
CUTC-204ENST00000493385 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
CUTC-204ENST00000493385 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
CUTC-204ENST00000493385 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
CUTC-204ENST00000493385 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
CUTC-204ENST00000493385 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
CUTC-204ENST00000493385 WDR62O43379 1518 aa12.52□□□□□ -0.41
CUTC-204ENST00000493385 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
CUTC-204ENST00000493385 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
CUTC-204ENST00000493385 MIER1Q8N108 512 aa12.49□□□□□ -0.41
CUTC-204ENST00000493385 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
CUTC-204ENST00000493385 DNAJC5Q9H3Z4 198 aa12.48□□□□□ -0.41
CUTC-204ENST00000493385 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
CUTC-204ENST00000493385 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
CUTC-204ENST00000493385 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
CUTC-204ENST00000493385 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
CUTC-204ENST00000493385 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
CUTC-204ENST00000493385 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
CUTC-204ENST00000493385 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
CUTC-204ENST00000493385 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
CUTC-204ENST00000493385 PKD2Q13563 968 aa12.33□□□□□ -0.44
CUTC-204ENST00000493385 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CUTC-204ENST00000493385 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
CUTC-204ENST00000493385 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
CUTC-204ENST00000493385 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
CUTC-204ENST00000493385 IFT140Q96RY7 1462 aa12.3□□□□□ -0.44
CUTC-204ENST00000493385 SUPT5HO00267 1087 aaKnown RBP12.29□□□□□ -0.44
CUTC-204ENST00000493385 PITPNM1O00562 1244 aa12.25□□□□□ -0.45
CUTC-204ENST00000493385 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
CUTC-204ENST00000493385 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
CUTC-204ENST00000493385 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
CUTC-204ENST00000493385 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
CUTC-204ENST00000493385 SLC24A1O60721 1099 aa12.19□□□□□ -0.46
CUTC-204ENST00000493385 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
CUTC-204ENST00000493385 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
CUTC-204ENST00000493385 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
CUTC-204ENST00000493385 SOGA1O94964 1423 aa12.16□□□□□ -0.46
CUTC-204ENST00000493385 CUX1P39880 1505 aa12.16□□□□□ -0.46
CUTC-204ENST00000493385 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
CUTC-204ENST00000493385 FGD5Q6ZNL6 1462 aa12.14□□□□□ -0.47
CUTC-204ENST00000493385 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
CUTC-204ENST00000493385 NUBP1P53384 320 aa12.12□□□□□ -0.47
CUTC-204ENST00000493385 AQRO60306 1485 aaKnown RBP eCLIP12.11□□□□□ -0.47
CUTC-204ENST00000493385 RAD54L2Q9Y4B4 1467 aa12.11□□□□□ -0.47
CUTC-204ENST00000493385 TDRD9Q8NDG6 1382 aaKnown RBP12.07□□□□□ -0.48
CUTC-204ENST00000493385 RGL2O15211 777 aa12.07□□□□□ -0.48
CUTC-204ENST00000493385 GSE1Q14687 1217 aa12.07□□□□□ -0.48
CUTC-204ENST00000493385 WRNQ14191 1432 aaPredicted RBP eCLIP12.06□□□□□ -0.48
CUTC-204ENST00000493385 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
CUTC-204ENST00000493385 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
CUTC-204ENST00000493385 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
CUTC-204ENST00000493385 BIVM-ERCC5R4GMW8 1640 aa12.05□□□□□ -0.48
CUTC-204ENST00000493385 GRIN2BQ13224 1484 aa12.05□□□□□ -0.48
CUTC-204ENST00000493385 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
CUTC-204ENST00000493385 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
CUTC-204ENST00000493385 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
CUTC-204ENST00000493385 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.48
CUTC-204ENST00000493385 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
CUTC-204ENST00000493385 CHD1O14646 1710 aa12.01□□□□□ -0.49
CUTC-204ENST00000493385 FAM212AQ96EL1 285 aa12.01□□□□□ -0.49
CUTC-204ENST00000493385 SNAPC4Q5SXM2 1469 aa12.01□□□□□ -0.49
CUTC-204ENST00000493385 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
CUTC-204ENST00000493385 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
CUTC-204ENST00000493385 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
CUTC-204ENST00000493385 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
CUTC-204ENST00000493385 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
CUTC-204ENST00000493385 PBRM1Q86U86 1689 aa11.97□□□□□ -0.49
CUTC-204ENST00000493385 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
CUTC-204ENST00000493385 FXR2P51116 673 aaKnown RBP eCLIP11.95□□□□□ -0.5
CUTC-204ENST00000493385 PLCB2Q00722 1185 aa11.95□□□□□ -0.5
CUTC-204ENST00000493385 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
CUTC-204ENST00000493385 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
CUTC-204ENST00000493385 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
CUTC-204ENST00000493385 ARHGEF11O15085 1522 aa11.95□□□□□ -0.5
CUTC-204ENST00000493385 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
CUTC-204ENST00000493385 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
CUTC-204ENST00000493385 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
CUTC-204ENST00000493385 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
CUTC-204ENST00000493385 FHAD1B1AJZ9 1412 aa11.9□□□□□ -0.5
CUTC-204ENST00000493385 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
CUTC-204ENST00000493385 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
CUTC-204ENST00000493385 ADAMTS12P58397 1594 aa11.88□□□□□ -0.51
CUTC-204ENST00000493385 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
CUTC-204ENST00000493385 GRIN2AQ12879 1464 aa11.88□□□□□ -0.51
CUTC-204ENST00000493385 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
CUTC-204ENST00000493385 PYGBP11216 843 aa11.86□□□□□ -0.51
CUTC-204ENST00000493385 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
CUTC-204ENST00000493385 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
CUTC-204ENST00000493385 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
CUTC-204ENST00000493385 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
CUTC-204ENST00000493385 NUP160Q12769 1436 aa11.85□□□□□ -0.51
CUTC-204ENST00000493385 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
CUTC-204ENST00000493385 CYB5RLQ6IPT4 315 aa11.83□□□□□ -0.52
CUTC-204ENST00000493385 ARAP1Q96P48 1450 aa11.83□□□□□ -0.52
CUTC-204ENST00000493385 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
CUTC-204ENST00000493385 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
CUTC-204ENST00000493385 CEP170Q5SW79 1584 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms