RNA–Protein interactions for RNA: ENST00000492526.5

SLTM-208, Transcript of SAFB like transcription modulator, human

TSL 2

Gene SLTM, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-208	ENST00000492526	ZMYND15	Q9H091	742 aa		11.74	□□□□□ -0.53
SLTM-208	ENST00000492526	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.73	□□□□□ -0.53
SLTM-208	ENST00000492526	CADPS	Q9ULU8	1353 aa		11.68	□□□□□ -0.54
SLTM-208	ENST00000492526	EHMT2	Q96KQ7	1210 aa		11.68	□□□□□ -0.54
SLTM-208	ENST00000492526	VSIG10	Q8N0Z9	540 aa		11.67	□□□□□ -0.54
SLTM-208	ENST00000492526	ERCC6	Q03468	1493 aa		11.66	□□□□□ -0.54
SLTM-208	ENST00000492526	AAMP	Q13685	434 aa		11.65	□□□□□ -0.54
SLTM-208	ENST00000492526	PAK3	O75914	559 aa	Predicted RBP	11.63	□□□□□ -0.55
SLTM-208	ENST00000492526	RBM10	P98175	930 aa	Known RBP	11.62	□□□□□ -0.55
SLTM-208	ENST00000492526	KCNH8	Q96L42	1107 aa		11.62	□□□□□ -0.55
SLTM-208	ENST00000492526	TAF7L	Q5H9L4	462 aa		11.61	□□□□□ -0.55
SLTM-208	ENST00000492526	CFTR	P13569	1480 aa		11.59	□□□□□ -0.55
SLTM-208	ENST00000492526	NOP58	Q9Y2X3	529 aa	Known RBP	11.57	□□□□□ -0.56
SLTM-208	ENST00000492526	PDS5B	Q9NTI5	1447 aa		11.57	□□□□□ -0.56
SLTM-208	ENST00000492526	LAMC3	Q9Y6N6	1575 aa		11.56	□□□□□ -0.56
SLTM-208	ENST00000492526	FANCD2	Q9BXW9	1451 aa		11.56	□□□□□ -0.56
SLTM-208	ENST00000492526	RTL5	Q5HYW3	569 aa	Predicted RBP	11.55	□□□□□ -0.56
SLTM-208	ENST00000492526	BRPF3	Q9ULD4	1205 aa		11.54	□□□□□ -0.56
SLTM-208	ENST00000492526	PLPPR3	Q6T4P5	718 aa		11.54	□□□□□ -0.56
SLTM-208	ENST00000492526	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.54	□□□□□ -0.56
SLTM-208	ENST00000492526	KIF21A	Q7Z4S6	1674 aa		11.53	□□□□□ -0.56
SLTM-208	ENST00000492526	CEP164	Q9UPV0	1460 aa		11.5	□□□□□ -0.57
SLTM-208	ENST00000492526	C11orf95	C9JLR9	678 aa	Predicted RBP	11.46	□□□□□ -0.57
SLTM-208	ENST00000492526	RSPH6A	Q9H0K4	717 aa		11.46	□□□□□ -0.57
SLTM-208	ENST00000492526	ABCC8	Q09428	1581 aa		11.44	□□□□□ -0.58
SLTM-208	ENST00000492526	URB2	Q14146	1524 aa	Known RBP	11.44	□□□□□ -0.58
SLTM-208	ENST00000492526	MRC2	Q9UBG0	1479 aa		11.43	□□□□□ -0.58
SLTM-208	ENST00000492526	IRX6	P78412	446 aa	Predicted RBP	11.42	□□□□□ -0.58
SLTM-208	ENST00000492526	WASHC2A	Q641Q2	1341 aa		11.42	□□□□□ -0.58
SLTM-208	ENST00000492526	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.41	□□□□□ -0.58
SLTM-208	ENST00000492526	TULP1	O00294	542 aa	Predicted RBP	11.4	□□□□□ -0.58
SLTM-208	ENST00000492526	HOMEZ	Q8IX15	550 aa		11.4	□□□□□ -0.58
SLTM-208	ENST00000492526	DHX37	Q8IY37	1157 aa	Known RBP	11.4	□□□□□ -0.58
SLTM-208	ENST00000492526	THOC2	Q8NI27	1593 aa	Known RBP	11.4	□□□□□ -0.59
SLTM-208	ENST00000492526	WASHC2C	Q9Y4E1	1318 aa		11.39	□□□□□ -0.59
SLTM-208	ENST00000492526	TRIM52	Q96A61	297 aa		11.37	□□□□□ -0.59
SLTM-208	ENST00000492526	TOPBP1	Q92547	1522 aa		11.37	□□□□□ -0.59
SLTM-208	ENST00000492526	CHMP4A	Q9BY43	222 aa		11.37	□□□□□ -0.59
SLTM-208	ENST00000492526	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.36	□□□□□ -0.59
SLTM-208	ENST00000492526	PRDM2	Q13029	1718 aa		11.35	□□□□□ -0.59
SLTM-208	ENST00000492526	CUX1	P39880	1505 aa		11.35	□□□□□ -0.59
SLTM-208	ENST00000492526	RAD54L2	Q9Y4B4	1467 aa		11.35	□□□□□ -0.59
SLTM-208	ENST00000492526	NEFM	P07197	916 aa		11.34	□□□□□ -0.59
SLTM-208	ENST00000492526	BRD2	P25440	801 aa	Known RBP	11.34	□□□□□ -0.59
SLTM-208	ENST00000492526	WDR62	O43379	1518 aa		11.33	□□□□□ -0.6
SLTM-208	ENST00000492526	TDRD9	Q8NDG6	1382 aa	Known RBP	11.32	□□□□□ -0.6
SLTM-208	ENST00000492526	ZNF326	Q5BKZ1	582 aa	Known RBP	11.31	□□□□□ -0.6
SLTM-208	ENST00000492526	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.31	□□□□□ -0.6
SLTM-208	ENST00000492526	CUX2	O14529	1486 aa		11.31	□□□□□ -0.6
SLTM-208	ENST00000492526	FGD5	Q6ZNL6	1462 aa		11.31	□□□□□ -0.6
SLTM-208	ENST00000492526	RSPH4A	Q5TD94	716 aa		11.31	□□□□□ -0.6
SLTM-208	ENST00000492526	POLA1	P09884	1462 aa	Predicted RBP	11.31	□□□□□ -0.6
SLTM-208	ENST00000492526	IPO9	Q96P70	1041 aa	Known RBP	11.3	□□□□□ -0.6
SLTM-208	ENST00000492526	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.3	□□□□□ -0.6
SLTM-208	ENST00000492526	LAS1L	Q9Y4W2	734 aa	Known RBP	11.3	□□□□□ -0.6
SLTM-208	ENST00000492526	SYNJ1	O43426	1573 aa		11.3	□□□□□ -0.6
SLTM-208	ENST00000492526	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.3	□□□□□ -0.6
SLTM-208	ENST00000492526	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.3	□□□□□ -0.6
SLTM-208	ENST00000492526	SOGA1	O94964	1423 aa		11.29	□□□□□ -0.6
SLTM-208	ENST00000492526	DNMBP	Q6XZF7	1577 aa		11.29	□□□□□ -0.6
SLTM-208	ENST00000492526	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.29	□□□□□ -0.6
SLTM-208	ENST00000492526	AQR	O60306	1485 aa	Known RBP eCLIP	11.28	□□□□□ -0.6	1e-6	■■■■□ 24.8
SLTM-208	ENST00000492526	HAP1	P54257	671 aa	Predicted RBP	11.28	□□□□□ -0.6
SLTM-208	ENST00000492526	FBLN2	P98095	1184 aa		11.27	□□□□□ -0.61
SLTM-208	ENST00000492526	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.25	□□□□□ -0.61
SLTM-208	ENST00000492526	FAM43A	Q8N2R8	423 aa		11.25	□□□□□ -0.61
SLTM-208	ENST00000492526	ANP32A	P39687	249 aa	Known RBP	11.25	□□□□□ -0.61
SLTM-208	ENST00000492526	NPM2	Q86SE8	214 aa	Known RBP	11.25	□□□□□ -0.61
SLTM-208	ENST00000492526	B4GALNT3	Q6L9W6	998 aa		11.23	□□□□□ -0.61
SLTM-208	ENST00000492526	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.22	□□□□□ -0.61
SLTM-208	ENST00000492526	GSE1	Q14687	1217 aa		11.22	□□□□□ -0.61
SLTM-208	ENST00000492526	RRP9	O43818	475 aa	Known RBP	11.22	□□□□□ -0.61
SLTM-208	ENST00000492526	CHMP4B	Q9H444	224 aa	Known RBP	11.22	□□□□□ -0.61
SLTM-208	ENST00000492526	TOP2B	Q02880	1626 aa		11.21	□□□□□ -0.62
SLTM-208	ENST00000492526	RGS3	P49796	1198 aa		11.21	□□□□□ -0.62
SLTM-208	ENST00000492526	BBX	Q8WY36	941 aa	Predicted RBP	11.21	□□□□□ -0.62
SLTM-208	ENST00000492526	IFT140	Q96RY7	1462 aa		11.21	□□□□□ -0.62
SLTM-208	ENST00000492526	USP35	Q9P2H5	1018 aa		11.2	□□□□□ -0.62
SLTM-208	ENST00000492526	PRDM4	Q9UKN5	801 aa		11.2	□□□□□ -0.62
SLTM-208	ENST00000492526	DCAF11	Q8TEB1	546 aa		11.19	□□□□□ -0.62
SLTM-208	ENST00000492526	FRAT1	Q92837	279 aa	Predicted RBP	11.19	□□□□□ -0.62
SLTM-208	ENST00000492526	PPP4R2	Q9NY27	417 aa		11.18	□□□□□ -0.62
SLTM-208	ENST00000492526	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.18	□□□□□ -0.62
SLTM-208	ENST00000492526	TARBP1	Q13395	1621 aa	Known RBP	11.17	□□□□□ -0.62
SLTM-208	ENST00000492526	RUSC2	Q8N2Y8	1516 aa		11.17	□□□□□ -0.62
SLTM-208	ENST00000492526	HSP90AA1	P07900	732 aa	Known RBP	11.16	□□□□□ -0.62
SLTM-208	ENST00000492526	C14orf37	Q86TY3	774 aa		11.16	□□□□□ -0.62
SLTM-208	ENST00000492526	BIVM-ERCC5	R4GMW8	1640 aa		11.15	□□□□□ -0.62
SLTM-208	ENST00000492526	IPO4	Q8TEX9	1081 aa	Known RBP	11.15	□□□□□ -0.62
SLTM-208	ENST00000492526	EIF4G3	O43432	1585 aa	Known RBP	11.14	□□□□□ -0.63
SLTM-208	ENST00000492526	GAPVD1	Q14C86	1478 aa		11.13	□□□□□ -0.63
SLTM-208	ENST00000492526	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.13	□□□□□ -0.63
SLTM-208	ENST00000492526	DDX10	Q13206	875 aa	Known RBP	11.12	□□□□□ -0.63
SLTM-208	ENST00000492526	GTF2E1	P29083	439 aa	Predicted RBP	11.12	□□□□□ -0.63
SLTM-208	ENST00000492526	ABCA10	Q8WWZ4	1543 aa		11.12	□□□□□ -0.63
SLTM-208	ENST00000492526	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.1	□□□□□ -0.63
SLTM-208	ENST00000492526	CANX	P27824	592 aa	Known RBP	11.1	□□□□□ -0.63
SLTM-208	ENST00000492526	SNAPC4	Q5SXM2	1469 aa		11.1	□□□□□ -0.63
SLTM-208	ENST00000492526	FOXD1	Q16676	465 aa		11.09	□□□□□ -0.63
SLTM-208	ENST00000492526	ZFP91	Q96JP5	570 aa	Predicted RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms