RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 FAM212AQ96EL1 285 aa14.3□□□□□ -0.12
NF1-214ENST00000490416 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
NF1-214ENST00000490416 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
NF1-214ENST00000490416 DCAF8Q5TAQ9 597 aa14.22□□□□□ -0.13
NF1-214ENST00000490416 GALR2O43603 387 aaPredicted RBP14.21□□□□□ -0.13
NF1-214ENST00000490416 SPOCK2Q92563 424 aa14.2□□□□□ -0.14
NF1-214ENST00000490416 DCBLD2Q96PD2 775 aa14.19□□□□□ -0.14
NF1-214ENST00000490416 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
NF1-214ENST00000490416 MS4A3Q96HJ5 214 aa14.16□□□□□ -0.14
NF1-214ENST00000490416 GSE1Q14687 1217 aa14.15□□□□□ -0.15
NF1-214ENST00000490416 MAP3K13O43283 966 aa14.13□□□□□ -0.15
NF1-214ENST00000490416 POTEIP0CG38 1075 aa14.08□□□□□ -0.16
NF1-214ENST00000490416 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
NF1-214ENST00000490416 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
NF1-214ENST00000490416 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
NF1-214ENST00000490416 PYGBP11216 843 aa14.05□□□□□ -0.16
NF1-214ENST00000490416 IFNL1Q8IU54 200 aa13.97□□□□□ -0.17
NF1-214ENST00000490416 ASTLQ6HA08 431 aaPredicted RBP13.95□□□□□ -0.18
NF1-214ENST00000490416 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
NF1-214ENST00000490416 CHRM1P11229 460 aaPredicted RBP13.94□□□□□ -0.18
NF1-214ENST00000490416 TIE1P35590 1138 aa13.94□□□□□ -0.18
NF1-214ENST00000490416 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
NF1-214ENST00000490416 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
NF1-214ENST00000490416 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
NF1-214ENST00000490416 ZNF467Q7Z7K2 595 aaPredicted RBP13.9□□□□□ -0.19
NF1-214ENST00000490416 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
NF1-214ENST00000490416 PCDHB8Q9UN66 801 aa13.89□□□□□ -0.19
NF1-214ENST00000490416 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
NF1-214ENST00000490416 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
NF1-214ENST00000490416 SLC39A7Q92504 469 aa13.85□□□□□ -0.19
NF1-214ENST00000490416 TMEM106CQ9BVX2 250 aa13.84□□□□□ -0.19
NF1-214ENST00000490416 C7P10643 843 aa13.82□□□□□ -0.2
NF1-214ENST00000490416 LHX8Q68G74 356 aa13.82□□□□□ -0.2
NF1-214ENST00000490416 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
NF1-214ENST00000490416 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
NF1-214ENST00000490416 PSEN1P49768 467 aa13.74□□□□□ -0.21
NF1-214ENST00000490416 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
NF1-214ENST00000490416 IER5LQ5T953 404 aa13.71□□□□□ -0.21
NF1-214ENST00000490416 SEC24BO95487 1268 aa13.69□□□□□ -0.22
NF1-214ENST00000490416 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
NF1-214ENST00000490416 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
NF1-214ENST00000490416 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
NF1-214ENST00000490416 POTEB2H3BUK9 544 aa13.63□□□□□ -0.23
NF1-214ENST00000490416 PKD2Q13563 968 aa13.63□□□□□ -0.23
NF1-214ENST00000490416 MKRN3Q13064 507 aaKnown RBP13.62□□□□□ -0.23
NF1-214ENST00000490416 RNF25Q96BH1 459 aaPredicted RBP13.62□□□□□ -0.23
NF1-214ENST00000490416 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
NF1-214ENST00000490416 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
NF1-214ENST00000490416 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
NF1-214ENST00000490416 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
NF1-214ENST00000490416 PLCG2P16885 1265 aa13.6□□□□□ -0.23
NF1-214ENST00000490416 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
NF1-214ENST00000490416 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
NF1-214ENST00000490416 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
NF1-214ENST00000490416 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
NF1-214ENST00000490416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.53□□□□□ -0.24
NF1-214ENST00000490416 ZFP91Q96JP5 570 aaPredicted RBP13.53□□□□□ -0.24
NF1-214ENST00000490416 RGL2O15211 777 aa13.5□□□□□ -0.25
NF1-214ENST00000490416 OTUD5Q96G74 571 aa13.5□□□□□ -0.25
NF1-214ENST00000490416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.253e-7■■■□□ 19
NF1-214ENST00000490416 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
NF1-214ENST00000490416 SCUBE2Q9NQ36 999 aa13.49□□□□□ -0.25
NF1-214ENST00000490416 EFCAB3Q8N7B9 438 aa13.44□□□□□ -0.26
NF1-214ENST00000490416 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
NF1-214ENST00000490416 STK25O00506 426 aa13.42□□□□□ -0.26
NF1-214ENST00000490416 PDCD7Q8N8D1 485 aaKnown RBP13.42□□□□□ -0.26
NF1-214ENST00000490416 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
NF1-214ENST00000490416 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
NF1-214ENST00000490416 SOX12O15370 315 aa13.38□□□□□ -0.27
NF1-214ENST00000490416 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
NF1-214ENST00000490416 G3V3G9 751 aa13.34□□□□□ -0.27
NF1-214ENST00000490416 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
NF1-214ENST00000490416 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
NF1-214ENST00000490416 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
NF1-214ENST00000490416 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
NF1-214ENST00000490416 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
NF1-214ENST00000490416 NLRP6P59044 892 aa13.28□□□□□ -0.28
NF1-214ENST00000490416 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
NF1-214ENST00000490416 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
NF1-214ENST00000490416 HS6ST3Q8IZP7 471 aa13.24□□□□□ -0.29
NF1-214ENST00000490416 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
NF1-214ENST00000490416 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
NF1-214ENST00000490416 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
NF1-214ENST00000490416 MFRPQ9BY79 579 aa13.21□□□□□ -0.29
NF1-214ENST00000490416 FBXO22Q8NEZ5 403 aa13.19□□□□□ -0.3
NF1-214ENST00000490416 TMEM121BQ9BXQ6 578 aaPredicted RBP13.15□□□□□ -0.3
NF1-214ENST00000490416 MICALL2Q8IY33 904 aa13.14□□□□□ -0.31
NF1-214ENST00000490416 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
NF1-214ENST00000490416 SNPHO15079 494 aa13.11□□□□□ -0.31
NF1-214ENST00000490416 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
NF1-214ENST00000490416 DNAJC5Q9H3Z4 198 aa13.08□□□□□ -0.32
NF1-214ENST00000490416 RYDENQ9NUL5 291 aaKnown RBP13.05□□□□□ -0.32
NF1-214ENST00000490416 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
NF1-214ENST00000490416 PPP1R37O75864 691 aa12.99□□□□□ -0.33
NF1-214ENST00000490416 POTEMA6NI47 508 aa12.97□□□□□ -0.33
NF1-214ENST00000490416 ST18O60284 1047 aa12.97□□□□□ -0.33
NF1-214ENST00000490416 LCE2DQ5TA82 110 aaPredicted RBP12.97□□□□□ -0.33
NF1-214ENST00000490416 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
NF1-214ENST00000490416 POTEGQ6S5H5 508 aa12.96□□□□□ -0.33
NF1-214ENST00000490416 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms