RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
NF1-213ENST00000489712 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
NF1-213ENST00000489712 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
NF1-213ENST00000489712 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
NF1-213ENST00000489712 GALR2O43603 387 aaPredicted RBP10.61□□□□□ -0.71
NF1-213ENST00000489712 DCAF8Q5TAQ9 597 aa10.6□□□□□ -0.71
NF1-213ENST00000489712 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
NF1-213ENST00000489712 GSE1Q14687 1217 aa10.58□□□□□ -0.72
NF1-213ENST00000489712 KIF12Q96FN5 646 aa10.58□□□□□ -0.72
NF1-213ENST00000489712 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
NF1-213ENST00000489712 MAP3K13O43283 966 aa10.54□□□□□ -0.72
NF1-213ENST00000489712 SGIP1Q9BQI5 828 aa10.51□□□□□ -0.73
NF1-213ENST00000489712 PCDHB13Q9Y5F0 798 aa10.51□□□□□ -0.73
NF1-213ENST00000489712 PYGBP11216 843 aa10.5□□□□□ -0.73
NF1-213ENST00000489712 CIZ1Q9ULV3 898 aaPredicted RBP10.5□□□□□ -0.73
NF1-213ENST00000489712 POTEIP0CG38 1075 aa10.49□□□□□ -0.73
NF1-213ENST00000489712 IFNL1Q8IU54 200 aa10.44□□□□□ -0.74
NF1-213ENST00000489712 TIE1P35590 1138 aa10.43□□□□□ -0.74
NF1-213ENST00000489712 TRIM41Q8WV44 630 aa10.43□□□□□ -0.74
NF1-213ENST00000489712 ASTLQ6HA08 431 aaPredicted RBP10.42□□□□□ -0.74
NF1-213ENST00000489712 TRPC6Q9Y210 931 aa10.42□□□□□ -0.74
NF1-213ENST00000489712 ATMINO43313 823 aaPredicted RBP10.41□□□□□ -0.74
NF1-213ENST00000489712 CHRM1P11229 460 aaPredicted RBP10.41□□□□□ -0.74
NF1-213ENST00000489712 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
NF1-213ENST00000489712 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
NF1-213ENST00000489712 TTLL13PA6NNM8 815 aa10.37□□□□□ -0.75
NF1-213ENST00000489712 PCDHB8Q9UN66 801 aa10.37□□□□□ -0.75
NF1-213ENST00000489712 ATN1P54259 1190 aaPredicted RBP10.35□□□□□ -0.75
NF1-213ENST00000489712 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
NF1-213ENST00000489712 TMEM106CQ9BVX2 250 aa10.34□□□□□ -0.75
NF1-213ENST00000489712 SLC39A7Q92504 469 aa10.33□□□□□ -0.76
NF1-213ENST00000489712 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
NF1-213ENST00000489712 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
NF1-213ENST00000489712 C7P10643 843 aa10.3□□□□□ -0.76
NF1-213ENST00000489712 PDAP1Q13442 181 aaKnown RBP10.28□□□□□ -0.76
NF1-213ENST00000489712 PSEN1P49768 467 aa10.27□□□□□ -0.77
NF1-213ENST00000489712 LHX8Q68G74 356 aa10.27□□□□□ -0.77
NF1-213ENST00000489712 IER5LQ5T953 404 aa10.25□□□□□ -0.77
NF1-213ENST00000489712 ECM2O94769 699 aaPredicted RBP10.24□□□□□ -0.77
NF1-213ENST00000489712 RIOK3O14730 519 aaKnown RBP10.23□□□□□ -0.77
NF1-213ENST00000489712 PKD2Q13563 968 aa10.22□□□□□ -0.77
NF1-213ENST00000489712 RNF25Q96BH1 459 aaPredicted RBP10.22□□□□□ -0.77
NF1-213ENST00000489712 GOLGA2Q08379 1002 aa10.21□□□□□ -0.77
NF1-213ENST00000489712 SEC24BO95487 1268 aa10.2□□□□□ -0.78
NF1-213ENST00000489712 VGFO15240 615 aaPredicted RBP10.19□□□□□ -0.78
NF1-213ENST00000489712 TAOK2Q9UL54 1235 aa10.18□□□□□ -0.78
NF1-213ENST00000489712 PLCG2P16885 1265 aa10.17□□□□□ -0.78
NF1-213ENST00000489712 MKRN3Q13064 507 aaKnown RBP10.16□□□□□ -0.78
NF1-213ENST00000489712 POTEFA5A3E0 1075 aa10.15□□□□□ -0.78
NF1-213ENST00000489712 POTEB2H3BUK9 544 aa10.15□□□□□ -0.78
NF1-213ENST00000489712 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
NF1-213ENST00000489712 COLQQ9Y215 455 aaPredicted RBP10.15□□□□□ -0.78
NF1-213ENST00000489712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.14□□□□□ -0.79
NF1-213ENST00000489712 IRX5P78411 483 aaPredicted RBP10.14□□□□□ -0.79
NF1-213ENST00000489712 ZFP91Q96JP5 570 aaPredicted RBP10.14□□□□□ -0.79
NF1-213ENST00000489712 RGL2O15211 777 aa10.12□□□□□ -0.79
NF1-213ENST00000489712 OCEL1Q9H607 264 aa10.11□□□□□ -0.79
NF1-213ENST00000489712 MAMSTRQ6ZN01 415 aa10.1□□□□□ -0.79
NF1-213ENST00000489712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.89e-7■■■□□ 15.7
NF1-213ENST00000489712 SCUBE2Q9NQ36 999 aa10.07□□□□□ -0.8
NF1-213ENST00000489712 POTEJP0CG39 1038 aa10.06□□□□□ -0.8
NF1-213ENST00000489712 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
NF1-213ENST00000489712 BCL11BQ9C0K0 894 aaPredicted RBP10.06□□□□□ -0.8
NF1-213ENST00000489712 STK25O00506 426 aa10.05□□□□□ -0.8
NF1-213ENST00000489712 EFCAB3Q8N7B9 438 aa10.05□□□□□ -0.8
NF1-213ENST00000489712 PDCD7Q8N8D1 485 aaKnown RBP10.04□□□□□ -0.8
NF1-213ENST00000489712 STK24Q9Y6E0 443 aa10.04□□□□□ -0.8
NF1-213ENST00000489712 ILDR1Q86SU0 546 aaPredicted RBP10.02□□□□□ -0.81
NF1-213ENST00000489712 SOX12O15370 315 aa9.99□□□□□ -0.81
NF1-213ENST00000489712 L3MBTL3Q96JM7 780 aaPredicted RBP9.98□□□□□ -0.81
NF1-213ENST00000489712 G3V3G9 751 aa9.96□□□□□ -0.82
NF1-213ENST00000489712 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
NF1-213ENST00000489712 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
NF1-213ENST00000489712 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
NF1-213ENST00000489712 HS6ST3Q8IZP7 471 aa9.94□□□□□ -0.82
NF1-213ENST00000489712 NLRP6P59044 892 aa9.93□□□□□ -0.82
NF1-213ENST00000489712 DPY19L2Q6NUT2 758 aa9.93□□□□□ -0.82
NF1-213ENST00000489712 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.93□□□□□ -0.82
NF1-213ENST00000489712 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
NF1-213ENST00000489712 CHGAP10645 457 aaKnown RBP9.91□□□□□ -0.82
NF1-213ENST00000489712 SLAIN1Q8ND83 568 aa9.91□□□□□ -0.82
NF1-213ENST00000489712 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
NF1-213ENST00000489712 MS4A4AQ96JQ5 239 aa9.9□□□□□ -0.82
NF1-213ENST00000489712 MFRPQ9BY79 579 aa9.89□□□□□ -0.83
NF1-213ENST00000489712 FBXO22Q8NEZ5 403 aa9.88□□□□□ -0.83
NF1-213ENST00000489712 MICALL2Q8IY33 904 aa9.85□□□□□ -0.83
NF1-213ENST00000489712 RTN4Q9NQC3 1192 aaKnown RBP9.85□□□□□ -0.83
NF1-213ENST00000489712 TMEM121BQ9BXQ6 578 aaPredicted RBP9.84□□□□□ -0.83
NF1-213ENST00000489712 DNAJC5Q9H3Z4 198 aa9.82□□□□□ -0.84
NF1-213ENST00000489712 RYDENQ9NUL5 291 aaKnown RBP9.78□□□□□ -0.84
NF1-213ENST00000489712 SNPHO15079 494 aa9.76□□□□□ -0.85
NF1-213ENST00000489712 NKX1-1Q15270 411 aaPredicted RBP9.76□□□□□ -0.85
NF1-213ENST00000489712 FAM163AQ96GL9 167 aaPredicted RBP9.74□□□□□ -0.85
NF1-213ENST00000489712 PPP1R37O75864 691 aa9.71□□□□□ -0.86
NF1-213ENST00000489712 TMEM92Q6UXU6 159 aa9.7□□□□□ -0.86
NF1-213ENST00000489712 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
NF1-213ENST00000489712 POTEMA6NI47 508 aa9.66□□□□□ -0.86
NF1-213ENST00000489712 ST18O60284 1047 aa9.66□□□□□ -0.86
NF1-213ENST00000489712 POTEGQ6S5H5 508 aa9.66□□□□□ -0.86
NF1-213ENST00000489712 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms