RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 GLIPR1L2Q4G1C9 344 aa20.38■□□□□ 0.85
PKD1-220ENST00000487932 LMOD2Q6P5Q4 547 aa20.38■□□□□ 0.85
PKD1-220ENST00000487932 PPM1GO15355 546 aaPredicted RBP20.37■□□□□ 0.85
PKD1-220ENST00000487932 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
PKD1-220ENST00000487932 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
PKD1-220ENST00000487932 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
PKD1-220ENST00000487932 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
PKD1-220ENST00000487932 CSRNP3Q8WYN3 585 aa20.33■□□□□ 0.84
PKD1-220ENST00000487932 HIRIP3Q9BW71 556 aaPredicted RBP20.31■□□□□ 0.84
PKD1-220ENST00000487932 TSPY4P0CV99 314 aa20.31■□□□□ 0.84
PKD1-220ENST00000487932 TSPY10P0CW01 314 aa20.31■□□□□ 0.84
PKD1-220ENST00000487932 ZRSR1Q15695 479 aaKnown RBP20.31■□□□□ 0.84
PKD1-220ENST00000487932 MRS2Q9HD23 443 aa20.31■□□□□ 0.84
PKD1-220ENST00000487932 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
PKD1-220ENST00000487932 CLSTN1O94985 981 aa20.24■□□□□ 0.83
PKD1-220ENST00000487932 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
PKD1-220ENST00000487932 TRIM44Q96DX7 344 aaPredicted RBP20.2■□□□□ 0.82
PKD1-220ENST00000487932 PTMAP06454 111 aaKnown RBP20.2■□□□□ 0.82
PKD1-220ENST00000487932 RGL3Q3MIN7 710 aa20.2■□□□□ 0.82
PKD1-220ENST00000487932 NAP1L2Q9ULW6 460 aaPredicted RBP20.17■□□□□ 0.82
PKD1-220ENST00000487932 DNTTIP2Q5QJE6 756 aaKnown RBP20.15■□□□□ 0.82
PKD1-220ENST00000487932 NEUROD2Q15784 382 aa20.14■□□□□ 0.81
PKD1-220ENST00000487932 PLCB2Q00722 1185 aa20.13■□□□□ 0.81
PKD1-220ENST00000487932 BECN1Q14457 450 aa20.13■□□□□ 0.81
PKD1-220ENST00000487932 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
PKD1-220ENST00000487932 GOLGA6L22H0YM25 854 aa20.13■□□□□ 0.81
PKD1-220ENST00000487932 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
PKD1-220ENST00000487932 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
PKD1-220ENST00000487932 ISY1Q9ULR0 285 aaKnown RBP20.12■□□□□ 0.81
PKD1-220ENST00000487932 OS9Q13438 667 aaPredicted RBP20.09■□□□□ 0.81
PKD1-220ENST00000487932 FTSJ3Q8IY81 847 aaKnown RBP20.09■□□□□ 0.81
PKD1-220ENST00000487932 CFAP53Q96M91 514 aa20.07■□□□□ 0.8
PKD1-220ENST00000487932 FGD1P98174 961 aa20.07■□□□□ 0.8
PKD1-220ENST00000487932 TNNT2P45379 298 aaPredicted RBP20.07■□□□□ 0.8
PKD1-220ENST00000487932 MTUS2Q5JR59 1369 aa20.04■□□□□ 0.8
PKD1-220ENST00000487932 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
PKD1-220ENST00000487932 SOX12O15370 315 aa20.03■□□□□ 0.8
PKD1-220ENST00000487932 POGKQ9P215 609 aa20■□□□□ 0.79
PKD1-220ENST00000487932 DDRGK1Q96HY6 314 aa20■□□□□ 0.79
PKD1-220ENST00000487932 KCNJ4P48050 445 aa19.99■□□□□ 0.79
PKD1-220ENST00000487932 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
PKD1-220ENST00000487932 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
PKD1-220ENST00000487932 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.79
PKD1-220ENST00000487932 FRAT1Q92837 279 aaPredicted RBP19.95■□□□□ 0.78
PKD1-220ENST00000487932 AMER1Q5JTC6 1135 aaPredicted RBP19.94■□□□□ 0.78
PKD1-220ENST00000487932 MLECQ14165 292 aa19.93■□□□□ 0.78
PKD1-220ENST00000487932 U2SURPO15042 1029 aaKnown RBP19.91■□□□□ 0.78
PKD1-220ENST00000487932 PRM3Q9NNZ6 103 aa19.91■□□□□ 0.78
PKD1-220ENST00000487932 PLEKHD1A6NEE1 506 aa19.89■□□□□ 0.77
PKD1-220ENST00000487932 RGS3P49796 1198 aa19.88■□□□□ 0.77
PKD1-220ENST00000487932 GOLGA6L6A8MZA4 724 aa19.88■□□□□ 0.77
PKD1-220ENST00000487932 HSP90AB1P08238 724 aaKnown RBP19.86■□□□□ 0.77
PKD1-220ENST00000487932 ANP32EQ9BTT0 268 aa19.86■□□□□ 0.77
PKD1-220ENST00000487932 NUDCQ9Y266 331 aa19.85■□□□□ 0.77
PKD1-220ENST00000487932 ZNF330Q9Y3S2 320 aaPredicted RBP19.85■□□□□ 0.77
PKD1-220ENST00000487932 CC2D1BQ5T0F9 858 aaKnown RBP19.84■□□□□ 0.77
PKD1-220ENST00000487932 NAP1L5Q96NT1 182 aaPredicted RBP19.84■□□□□ 0.77
PKD1-220ENST00000487932 CARD11Q9BXL7 1154 aa19.82■□□□□ 0.76
PKD1-220ENST00000487932 MIER1Q8N108 512 aa19.82■□□□□ 0.76
PKD1-220ENST00000487932 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
PKD1-220ENST00000487932 GOLGA6L4A6NEF3 574 aa19.8■□□□□ 0.76
PKD1-220ENST00000487932 CDCA8Q53HL2 280 aa19.8■□□□□ 0.76
PKD1-220ENST00000487932 RTN4Q9NQC3 1192 aaKnown RBP19.8■□□□□ 0.76
PKD1-220ENST00000487932 PDE4CQ08493 712 aa19.79■□□□□ 0.76
PKD1-220ENST00000487932 SAFB2Q14151 953 aaKnown RBP eCLIP19.79■□□□□ 0.76
PKD1-220ENST00000487932 CCDC9Q9Y3X0 531 aaKnown RBP19.77■□□□□ 0.76
PKD1-220ENST00000487932 GNL2Q13823 731 aaKnown RBP19.77■□□□□ 0.76
PKD1-220ENST00000487932 ERICH6BQ5W0A0 696 aa19.77■□□□□ 0.75
PKD1-220ENST00000487932 SPRYD3Q8NCJ5 442 aa19.76■□□□□ 0.75
PKD1-220ENST00000487932 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.76■□□□□ 0.75
PKD1-220ENST00000487932 DRC7Q8IY82 874 aa19.74■□□□□ 0.75
PKD1-220ENST00000487932 APBB1O00213 710 aa19.73■□□□□ 0.75
PKD1-220ENST00000487932 CFDP1Q9UEE9 299 aaPredicted RBP19.73■□□□□ 0.75
PKD1-220ENST00000487932 SUPT16HQ9Y5B9 1047 aaKnown RBP19.73■□□□□ 0.75
PKD1-220ENST00000487932 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
PKD1-220ENST00000487932 ANO8Q9HCE9 1232 aaPredicted RBP19.72■□□□□ 0.75
PKD1-220ENST00000487932 NRDCO43847 1150 aa19.71■□□□□ 0.75
PKD1-220ENST00000487932 SRPK2P78362 688 aaKnown RBP19.7■□□□□ 0.74
PKD1-220ENST00000487932 CSB-PGBD3P0DP91 1061 aa19.69■□□□□ 0.74
PKD1-220ENST00000487932 TMX4Q9H1E5 349 aaPredicted RBP19.69■□□□□ 0.74
PKD1-220ENST00000487932 PNNQ9H307 717 aaKnown RBP19.68■□□□□ 0.74
PKD1-220ENST00000487932 RTF1Q92541 710 aaKnown RBP19.65■□□□□ 0.74
PKD1-220ENST00000487932 NOC3LQ8WTT2 800 aaKnown RBP19.65■□□□□ 0.74
PKD1-220ENST00000487932 STK26Q9P289 416 aa19.65■□□□□ 0.74
PKD1-220ENST00000487932 G3V3G9 751 aa19.63■□□□□ 0.73
PKD1-220ENST00000487932 DCAF8Q5TAQ9 597 aa19.63■□□□□ 0.73
PKD1-220ENST00000487932 KIAA2012Q0VF49 1180 aa19.63■□□□□ 0.73
PKD1-220ENST00000487932 CHMP4BQ9H444 224 aaKnown RBP19.61■□□□□ 0.73
PKD1-220ENST00000487932 MCCP23508 829 aa19.61■□□□□ 0.73
PKD1-220ENST00000487932 HSCBQ8IWL3 235 aa19.6■□□□□ 0.73
PKD1-220ENST00000487932 CHMP3Q9Y3E7 222 aa19.59■□□□□ 0.73
PKD1-220ENST00000487932 CHAF1AQ13111 956 aaPredicted RBP19.59■□□□□ 0.73
PKD1-220ENST00000487932 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
PKD1-220ENST00000487932 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
PKD1-220ENST00000487932 HDGFP51858 240 aaKnown RBP19.55■□□□□ 0.72
PKD1-220ENST00000487932 MS4A1P11836 297 aa19.55■□□□□ 0.72
PKD1-220ENST00000487932 MORC1Q86VD1 984 aa19.54■□□□□ 0.72
PKD1-220ENST00000487932 CREBRFQ8IUR6 639 aa19.53■□□□□ 0.72
PKD1-220ENST00000487932 HSP90B1P14625 803 aaKnown RBP19.53■□□□□ 0.72
PKD1-220ENST00000487932 GORABQ5T7V8 394 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms