RNA–Protein interactions for RNA: ENST00000487347.1

LPP-217, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-217ENST00000487347 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
LPP-217ENST00000487347 GSE1Q14687 1217 aa11.85□□□□□ -0.51
LPP-217ENST00000487347 NBR1Q14596 966 aa11.8□□□□□ -0.52
LPP-217ENST00000487347 GTPBP6O43824 516 aaPredicted RBP11.79□□□□□ -0.52
LPP-217ENST00000487347 RIOK3O14730 519 aaKnown RBP11.78□□□□□ -0.52
LPP-217ENST00000487347 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
LPP-217ENST00000487347 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
LPP-217ENST00000487347 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
LPP-217ENST00000487347 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
LPP-217ENST00000487347 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
LPP-217ENST00000487347 STK25O00506 426 aa11.67□□□□□ -0.54
LPP-217ENST00000487347 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
LPP-217ENST00000487347 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
LPP-217ENST00000487347 FAM212AQ96EL1 285 aa11.65□□□□□ -0.54
LPP-217ENST00000487347 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
LPP-217ENST00000487347 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
LPP-217ENST00000487347 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
LPP-217ENST00000487347 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
LPP-217ENST00000487347 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
LPP-217ENST00000487347 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
LPP-217ENST00000487347 STK24Q9Y6E0 443 aa11.56□□□□□ -0.56
LPP-217ENST00000487347 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
LPP-217ENST00000487347 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
LPP-217ENST00000487347 PYGBP11216 843 aa11.5□□□□□ -0.57
LPP-217ENST00000487347 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
LPP-217ENST00000487347 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
LPP-217ENST00000487347 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
LPP-217ENST00000487347 TULP1O00294 542 aaPredicted RBP11.43□□□□□ -0.58
LPP-217ENST00000487347 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
LPP-217ENST00000487347 P3H3Q8IVL6 736 aa11.43□□□□□ -0.58
LPP-217ENST00000487347 GTF3C3Q9Y5Q9 886 aa11.43□□□□□ -0.58
LPP-217ENST00000487347 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
LPP-217ENST00000487347 TMEM132AQ24JP5 1023 aa11.37□□□□□ -0.59
LPP-217ENST00000487347 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
LPP-217ENST00000487347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
LPP-217ENST00000487347 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
LPP-217ENST00000487347 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
LPP-217ENST00000487347 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
LPP-217ENST00000487347 WDR70Q9NW82 654 aa11.31□□□□□ -0.6
LPP-217ENST00000487347 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
LPP-217ENST00000487347 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
LPP-217ENST00000487347 PCDHB8Q9UN66 801 aa11.28□□□□□ -0.6
LPP-217ENST00000487347 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
LPP-217ENST00000487347 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
LPP-217ENST00000487347 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
LPP-217ENST00000487347 PSEN1P49768 467 aa11.23□□□□□ -0.61
LPP-217ENST00000487347 CCDC61Q9Y6R9 512 aa11.23□□□□□ -0.61
LPP-217ENST00000487347 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
LPP-217ENST00000487347 PPP1R37O75864 691 aa11.21□□□□□ -0.61
LPP-217ENST00000487347 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
LPP-217ENST00000487347 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
LPP-217ENST00000487347 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
LPP-217ENST00000487347 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
LPP-217ENST00000487347 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
LPP-217ENST00000487347 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
LPP-217ENST00000487347 E2F4Q16254 413 aa11.14□□□□□ -0.63
LPP-217ENST00000487347 EFCAB3Q8N7B9 438 aa11.13□□□□□ -0.63
LPP-217ENST00000487347 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
LPP-217ENST00000487347 SEMA3EO15041 775 aa11.11□□□□□ -0.63
LPP-217ENST00000487347 NLRP6P59044 892 aa11.11□□□□□ -0.63
LPP-217ENST00000487347 SOX12O15370 315 aa11.1□□□□□ -0.63
LPP-217ENST00000487347 ARXQ96QS3 562 aa11.1□□□□□ -0.63
LPP-217ENST00000487347 PHF8Q9UPP1 1060 aa11.09□□□□□ -0.63
LPP-217ENST00000487347 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
LPP-217ENST00000487347 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
LPP-217ENST00000487347 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
LPP-217ENST00000487347 MAP3K13O43283 966 aa11.05□□□□□ -0.64
LPP-217ENST00000487347 KIF12Q96FN5 646 aa11.05□□□□□ -0.64
LPP-217ENST00000487347 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
LPP-217ENST00000487347 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
LPP-217ENST00000487347 MFSD10Q14728 455 aa11.03□□□□□ -0.64
LPP-217ENST00000487347 ZMYND10O75800 440 aa11.02□□□□□ -0.65
LPP-217ENST00000487347 ARIH1Q9Y4X5 557 aaPredicted RBP11.02□□□□□ -0.65
LPP-217ENST00000487347 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
LPP-217ENST00000487347 NEUROD2Q15784 382 aa11.01□□□□□ -0.65
LPP-217ENST00000487347 MS4A4AQ96JQ5 239 aa11.01□□□□□ -0.65
LPP-217ENST00000487347 CRISPLD2Q9H0B8 497 aa11□□□□□ -0.65
LPP-217ENST00000487347 LARP6Q9BRS8 491 aaKnown RBP10.99□□□□□ -0.65
LPP-217ENST00000487347 PDE4AP27815 886 aa10.97□□□□□ -0.65
LPP-217ENST00000487347 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
LPP-217ENST00000487347 CAMK2BQ13554 666 aa10.96□□□□□ -0.65
LPP-217ENST00000487347 POTEHQ6S545 545 aa10.95□□□□□ -0.66
LPP-217ENST00000487347 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
LPP-217ENST00000487347 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
LPP-217ENST00000487347 DDX27Q96GQ7 796 aaKnown RBP10.92□□□□□ -0.66
LPP-217ENST00000487347 HOMEZQ8IX15 550 aa10.86□□□□□ -0.67
LPP-217ENST00000487347 MLLT3P42568 568 aaPredicted RBP10.84□□□□□ -0.67
LPP-217ENST00000487347 RBM26Q5T8P6 1007 aaKnown RBP10.84□□□□□ -0.67
LPP-217ENST00000487347 PHF12Q96QT6 1004 aa10.84□□□□□ -0.67
LPP-217ENST00000487347 PIP4P2Q8N4L2 257 aa10.83□□□□□ -0.68
LPP-217ENST00000487347 AK7Q96M32 723 aa10.83□□□□□ -0.68
LPP-217ENST00000487347 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
LPP-217ENST00000487347 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
LPP-217ENST00000487347 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
LPP-217ENST00000487347 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
LPP-217ENST00000487347 TRPC6Q9Y210 931 aa10.8□□□□□ -0.68
LPP-217ENST00000487347 GPIHBP1Q8IV16 184 aa10.79□□□□□ -0.68
LPP-217ENST00000487347 GPBP1L1Q9HC44 474 aaPredicted RBP10.79□□□□□ -0.68
LPP-217ENST00000487347 SUPT5HO00267 1087 aaKnown RBP10.78□□□□□ -0.68
LPP-217ENST00000487347 GPHNQ9NQX3 736 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms