RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 ASTLQ6HA08 431 aaPredicted RBP16.01■□□□□ 0.15
TRA2A-207ENST00000486934 ATMINO43313 823 aaPredicted RBP15.98■□□□□ 0.15
TRA2A-207ENST00000486934 METRNQ9UJH8 293 aa15.98■□□□□ 0.15
TRA2A-207ENST00000486934 SLC39A7Q92504 469 aa15.94■□□□□ 0.14
TRA2A-207ENST00000486934 C7P10643 843 aa15.93■□□□□ 0.14
TRA2A-207ENST00000486934 CCDC61Q9Y6R9 512 aa15.93■□□□□ 0.14
TRA2A-207ENST00000486934 POTEMA6NI47 508 aa15.86■□□□□ 0.13
TRA2A-207ENST00000486934 POTEJP0CG39 1038 aa15.86■□□□□ 0.13
TRA2A-207ENST00000486934 KIF12Q96FN5 646 aa15.86■□□□□ 0.13
TRA2A-207ENST00000486934 ATN1P54259 1190 aaPredicted RBP15.85■□□□□ 0.13
TRA2A-207ENST00000486934 MIER1Q8N108 512 aa15.85■□□□□ 0.13
TRA2A-207ENST00000486934 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
TRA2A-207ENST00000486934 POTEGQ6S5H5 508 aa15.8■□□□□ 0.12
TRA2A-207ENST00000486934 FBXO3Q9UK99 471 aa15.8■□□□□ 0.12
TRA2A-207ENST00000486934 MAMSTRQ6ZN01 415 aa15.78■□□□□ 0.12
TRA2A-207ENST00000486934 MAP3K13O43283 966 aa15.77■□□□□ 0.12
TRA2A-207ENST00000486934 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
TRA2A-207ENST00000486934 TRPC6Q9Y210 931 aa15.77■□□□□ 0.12
TRA2A-207ENST00000486934 VASPP50552 380 aaPredicted RBP15.76■□□□□ 0.11
TRA2A-207ENST00000486934 BMP2KQ9NSY1 1161 aaPredicted RBP15.76■□□□□ 0.11
TRA2A-207ENST00000486934 SCUBE2Q9NQ36 999 aa15.7■□□□□ 0.1
TRA2A-207ENST00000486934 TIE1P35590 1138 aa15.69■□□□□ 0.1
TRA2A-207ENST00000486934 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
TRA2A-207ENST00000486934 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
TRA2A-207ENST00000486934 IFNLR1Q8IU57 520 aaPredicted RBP15.63■□□□□ 0.09
TRA2A-207ENST00000486934 FAM163AQ96GL9 167 aaPredicted RBP15.63■□□□□ 0.09
TRA2A-207ENST00000486934 TTLL13PA6NNM8 815 aa15.61■□□□□ 0.09
TRA2A-207ENST00000486934 LCE2DQ5TA82 110 aaPredicted RBP15.59■□□□□ 0.09
TRA2A-207ENST00000486934 SEC24BO95487 1268 aa15.58■□□□□ 0.08
TRA2A-207ENST00000486934 PCDH10Q9P2E7 1040 aa15.58■□□□□ 0.08
TRA2A-207ENST00000486934 COLQQ9Y215 455 aaPredicted RBP15.57■□□□□ 0.08
TRA2A-207ENST00000486934 PCDHB13Q9Y5F0 798 aa15.56■□□□□ 0.08
TRA2A-207ENST00000486934 ZBTB47Q9UFB7 747 aaPredicted RBP15.55■□□□□ 0.08
TRA2A-207ENST00000486934 SGIP1Q9BQI5 828 aa15.54■□□□□ 0.08
TRA2A-207ENST00000486934 NUBP1P53384 320 aa15.53■□□□□ 0.08
TRA2A-207ENST00000486934 TRIM35Q9UPQ4 493 aa15.53■□□□□ 0.08
TRA2A-207ENST00000486934 IER5LQ5T953 404 aa15.46■□□□□ 0.07
TRA2A-207ENST00000486934 IFNL1Q8IU54 200 aa15.46■□□□□ 0.07
TRA2A-207ENST00000486934 FAM212AQ96EL1 285 aa15.44■□□□□ 0.06
TRA2A-207ENST00000486934 TMEM106CQ9BVX2 250 aa15.4■□□□□ 0.06
TRA2A-207ENST00000486934 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
TRA2A-207ENST00000486934 SLAIN1Q8ND83 568 aa15.32■□□□□ 0.04
TRA2A-207ENST00000486934 PLCG2P16885 1265 aa15.31■□□□□ 0.04
TRA2A-207ENST00000486934 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
TRA2A-207ENST00000486934 DCAF8Q5TAQ9 597 aa15.3■□□□□ 0.04
TRA2A-207ENST00000486934 PYGBP11216 843 aa15.27■□□□□ 0.04
TRA2A-207ENST00000486934 IRX5P78411 483 aaPredicted RBP15.25■□□□□ 0.03
TRA2A-207ENST00000486934 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
TRA2A-207ENST00000486934 ST18O60284 1047 aa15.21■□□□□ 0.03
TRA2A-207ENST00000486934 OCEL1Q9H607 264 aa15.19■□□□□ 0.02
TRA2A-207ENST00000486934 PCDHB8Q9UN66 801 aa15.19■□□□□ 0.02
TRA2A-207ENST00000486934 PKD2Q13563 968 aa15.11■□□□□ 0.01
TRA2A-207ENST00000486934 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.07■□□□□ 0
TRA2A-207ENST00000486934 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
TRA2A-207ENST00000486934 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
TRA2A-207ENST00000486934 GSE1Q14687 1217 aa15.03■□□□□ -0
TRA2A-207ENST00000486934 SNPHO15079 494 aa15.02■□□□□ -0
TRA2A-207ENST00000486934 ZNF467Q7Z7K2 595 aaPredicted RBP15.01□□□□□ -0.01
TRA2A-207ENST00000486934 TMEM121BQ9BXQ6 578 aaPredicted RBP15.01□□□□□ -0.01
TRA2A-207ENST00000486934 GOLGA2Q08379 1002 aa14.99□□□□□ -0.01
TRA2A-207ENST00000486934 PDCD7Q8N8D1 485 aaKnown RBP14.98□□□□□ -0.01
TRA2A-207ENST00000486934 MKRN3Q13064 507 aaKnown RBP14.97□□□□□ -0.01
TRA2A-207ENST00000486934 MARVELD3Q96A59 401 aa14.96□□□□□ -0.01
TRA2A-207ENST00000486934 C3orf67Q6ZVT6 689 aa14.93□□□□□ -0.02
TRA2A-207ENST00000486934 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
TRA2A-207ENST00000486934 CHRM1P11229 460 aaPredicted RBP14.91□□□□□ -0.02
TRA2A-207ENST00000486934 L3MBTL3Q96JM7 780 aaPredicted RBP14.91□□□□□ -0.02
TRA2A-207ENST00000486934 PSEN1P49768 467 aa14.9□□□□□ -0.02
TRA2A-207ENST00000486934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.9□□□□□ -0.026e-19■■■■□ 21.7
TRA2A-207ENST00000486934 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
TRA2A-207ENST00000486934 ECM2O94769 699 aaPredicted RBP14.87□□□□□ -0.03
TRA2A-207ENST00000486934 SPNS2Q8IVW8 549 aa14.87□□□□□ -0.03
TRA2A-207ENST00000486934 RGL2O15211 777 aa14.86□□□□□ -0.03
TRA2A-207ENST00000486934 MMRN1Q13201 1228 aa14.86□□□□□ -0.03
TRA2A-207ENST00000486934 EMP3P54852 163 aa14.81□□□□□ -0.04
TRA2A-207ENST00000486934 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
TRA2A-207ENST00000486934 PDAP1Q13442 181 aaKnown RBP14.79□□□□□ -0.04
TRA2A-207ENST00000486934 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.05
TRA2A-207ENST00000486934 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
TRA2A-207ENST00000486934 CABP2Q9NPB3 220 aa14.74□□□□□ -0.05
TRA2A-207ENST00000486934 FAM205CA6NFA0 338 aa14.71□□□□□ -0.05
TRA2A-207ENST00000486934 HS3ST6Q96QI5 342 aa14.71□□□□□ -0.05
TRA2A-207ENST00000486934 POTEB3A0JP26 581 aa14.7□□□□□ -0.06
TRA2A-207ENST00000486934 RIOK3O14730 519 aaKnown RBP14.7□□□□□ -0.06
TRA2A-207ENST00000486934 POTEBQ6S5H4 581 aa14.7□□□□□ -0.06
TRA2A-207ENST00000486934 G3V3G9 751 aa14.68□□□□□ -0.06
TRA2A-207ENST00000486934 BOLA1Q9Y3E2 137 aa14.68□□□□□ -0.06
TRA2A-207ENST00000486934 KRTAP3-3Q9BYR6 98 aa14.65□□□□□ -0.06
TRA2A-207ENST00000486934 KRTAP3-2Q9BYR7 98 aa14.65□□□□□ -0.06
TRA2A-207ENST00000486934 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.61□□□□□ -0.07
TRA2A-207ENST00000486934 ZFP91Q96JP5 570 aaPredicted RBP14.61□□□□□ -0.07
TRA2A-207ENST00000486934 HOXB3P14651 431 aaPredicted RBP14.59□□□□□ -0.07
TRA2A-207ENST00000486934 VGFO15240 615 aaPredicted RBP14.58□□□□□ -0.08
TRA2A-207ENST00000486934 ZNF710Q8N1W2 664 aa14.55□□□□□ -0.08
TRA2A-207ENST00000486934 EFCAB3Q8N7B9 438 aa14.53□□□□□ -0.08
TRA2A-207ENST00000486934 HOXB1P14653 301 aaPredicted RBP14.51□□□□□ -0.09
TRA2A-207ENST00000486934 DOK7Q18PE1 504 aa14.5□□□□□ -0.09
TRA2A-207ENST00000486934 BCL11BQ9C0K0 894 aaPredicted RBP14.49□□□□□ -0.09
TRA2A-207ENST00000486934 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
TRA2A-207ENST00000486934 ERBB3P21860 1342 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms