RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 URB2Q14146 1524 aaKnown RBP16.77■□□□□ 0.27
VTI1A-205ENST00000483122 RAPGEF2Q9Y4G8 1499 aa16.75■□□□□ 0.27
VTI1A-205ENST00000483122 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
VTI1A-205ENST00000483122 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
VTI1A-205ENST00000483122 CUX1P39880 1505 aa16.73■□□□□ 0.27
VTI1A-205ENST00000483122 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
VTI1A-205ENST00000483122 BIVM-ERCC5R4GMW8 1640 aa16.72■□□□□ 0.27
VTI1A-205ENST00000483122 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
VTI1A-205ENST00000483122 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
VTI1A-205ENST00000483122 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.26
VTI1A-205ENST00000483122 SYNJ1O43426 1573 aa16.71■□□□□ 0.26
VTI1A-205ENST00000483122 ERICH6Q7L0X2 663 aa16.68■□□□□ 0.26
VTI1A-205ENST00000483122 CUX2O14529 1486 aa16.67■□□□□ 0.26
VTI1A-205ENST00000483122 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
VTI1A-205ENST00000483122 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
VTI1A-205ENST00000483122 MAPKBP1O60336 1514 aa16.64■□□□□ 0.25
VTI1A-205ENST00000483122 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
VTI1A-205ENST00000483122 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
VTI1A-205ENST00000483122 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
VTI1A-205ENST00000483122 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
VTI1A-205ENST00000483122 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
VTI1A-205ENST00000483122 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
VTI1A-205ENST00000483122 CDK11AQ9UQ88 783 aaPredicted RBP16.59■□□□□ 0.25
VTI1A-205ENST00000483122 HIRIP3Q9BW71 556 aaPredicted RBP16.58■□□□□ 0.24
VTI1A-205ENST00000483122 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
VTI1A-205ENST00000483122 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
VTI1A-205ENST00000483122 RAB3GAP2Q9H2M9 1393 aa16.57■□□□□ 0.24
VTI1A-205ENST00000483122 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
VTI1A-205ENST00000483122 ANP32CO43423 234 aa16.55■□□□□ 0.24
VTI1A-205ENST00000483122 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
VTI1A-205ENST00000483122 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
VTI1A-205ENST00000483122 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
VTI1A-205ENST00000483122 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
VTI1A-205ENST00000483122 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
VTI1A-205ENST00000483122 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
VTI1A-205ENST00000483122 SETD5Q9C0A6 1442 aa16.44■□□□□ 0.22
VTI1A-205ENST00000483122 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
VTI1A-205ENST00000483122 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
VTI1A-205ENST00000483122 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
VTI1A-205ENST00000483122 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
VTI1A-205ENST00000483122 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
VTI1A-205ENST00000483122 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
VTI1A-205ENST00000483122 NBR1Q14596 966 aa16.4■□□□□ 0.22
VTI1A-205ENST00000483122 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
VTI1A-205ENST00000483122 PPP4R2Q9NY27 417 aa16.38■□□□□ 0.21
VTI1A-205ENST00000483122 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
VTI1A-205ENST00000483122 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-205ENST00000483122 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
VTI1A-205ENST00000483122 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
VTI1A-205ENST00000483122 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
VTI1A-205ENST00000483122 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.21
VTI1A-205ENST00000483122 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
VTI1A-205ENST00000483122 ARHGAP35Q9NRY4 1499 aa16.34■□□□□ 0.21
VTI1A-205ENST00000483122 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
VTI1A-205ENST00000483122 B4GALNT3Q6L9W6 998 aa16.34■□□□□ 0.21
VTI1A-205ENST00000483122 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
VTI1A-205ENST00000483122 GRIN2BQ13224 1484 aa16.33■□□□□ 0.2
VTI1A-205ENST00000483122 FAM50AQ14320 339 aaKnown RBP16.28■□□□□ 0.2
VTI1A-205ENST00000483122 PHLDB1Q86UU1 1377 aa16.27■□□□□ 0.19
VTI1A-205ENST00000483122 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
VTI1A-205ENST00000483122 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
VTI1A-205ENST00000483122 CUL7Q14999 1698 aa16.26■□□□□ 0.19
VTI1A-205ENST00000483122 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
VTI1A-205ENST00000483122 IGF1RP08069 1367 aa16.24■□□□□ 0.19
VTI1A-205ENST00000483122 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
VTI1A-205ENST00000483122 IL27Q8NEV9 243 aa16.23■□□□□ 0.19
VTI1A-205ENST00000483122 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
VTI1A-205ENST00000483122 CCDC184Q52MB2 194 aa16.22■□□□□ 0.19
VTI1A-205ENST00000483122 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
VTI1A-205ENST00000483122 LRRC9Q6ZRR7 1453 aa16.21■□□□□ 0.18
VTI1A-205ENST00000483122 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
VTI1A-205ENST00000483122 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
VTI1A-205ENST00000483122 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
VTI1A-205ENST00000483122 RTL5Q5HYW3 569 aaPredicted RBP16.18■□□□□ 0.18
VTI1A-205ENST00000483122 RTN4Q9NQC3 1192 aaKnown RBP16.18■□□□□ 0.18
VTI1A-205ENST00000483122 IPO9Q96P70 1041 aaKnown RBP16.16■□□□□ 0.18
VTI1A-205ENST00000483122 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
VTI1A-205ENST00000483122 CHD1O14646 1710 aa16.15■□□□□ 0.18
VTI1A-205ENST00000483122 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
VTI1A-205ENST00000483122 FAM9BQ8IZU0 186 aa16.14■□□□□ 0.17
VTI1A-205ENST00000483122 ANP32AP39687 249 aaKnown RBP16.13■□□□□ 0.17
VTI1A-205ENST00000483122 ZBTB47Q9UFB7 747 aaPredicted RBP16.13■□□□□ 0.17
VTI1A-205ENST00000483122 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
VTI1A-205ENST00000483122 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
VTI1A-205ENST00000483122 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
VTI1A-205ENST00000483122 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
VTI1A-205ENST00000483122 KDM5BQ9UGL1 1544 aa16.1■□□□□ 0.17
VTI1A-205ENST00000483122 HSPA5P11021 654 aaKnown RBP16.09■□□□□ 0.17
VTI1A-205ENST00000483122 FBLN2P98095 1184 aa16.08■□□□□ 0.16
VTI1A-205ENST00000483122 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
VTI1A-205ENST00000483122 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
VTI1A-205ENST00000483122 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
VTI1A-205ENST00000483122 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
VTI1A-205ENST00000483122 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
VTI1A-205ENST00000483122 PRKRIP1Q9H875 184 aaPredicted RBP16.05■□□□□ 0.16
VTI1A-205ENST00000483122 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
VTI1A-205ENST00000483122 ATP1B4Q9UN42 357 aaPredicted RBP16.03■□□□□ 0.16
VTI1A-205ENST00000483122 NUP160Q12769 1436 aa16.03■□□□□ 0.16
VTI1A-205ENST00000483122 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
VTI1A-205ENST00000483122 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms