RNA–Protein interactions for RNA: ENST00000471145.1

NPHP3-205, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-205ENST00000471145 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
NPHP3-205ENST00000471145 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
NPHP3-205ENST00000471145 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
NPHP3-205ENST00000471145 SPOCK2Q92563 424 aa12.42□□□□□ -0.42
NPHP3-205ENST00000471145 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
NPHP3-205ENST00000471145 GSE1Q14687 1217 aa12.36□□□□□ -0.43
NPHP3-205ENST00000471145 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
NPHP3-205ENST00000471145 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
NPHP3-205ENST00000471145 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
NPHP3-205ENST00000471145 MAP3K13O43283 966 aa12.29□□□□□ -0.44
NPHP3-205ENST00000471145 MS4A3Q96HJ5 214 aa12.29□□□□□ -0.44
NPHP3-205ENST00000471145 DCBLD2Q96PD2 775 aa12.28□□□□□ -0.44
NPHP3-205ENST00000471145 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
NPHP3-205ENST00000471145 CIZ1Q9ULV3 898 aaPredicted RBP12.24□□□□□ -0.45
NPHP3-205ENST00000471145 PYGBP11216 843 aa12.23□□□□□ -0.45
NPHP3-205ENST00000471145 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
NPHP3-205ENST00000471145 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
NPHP3-205ENST00000471145 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
NPHP3-205ENST00000471145 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
NPHP3-205ENST00000471145 TIE1P35590 1138 aa12.15□□□□□ -0.46
NPHP3-205ENST00000471145 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
NPHP3-205ENST00000471145 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
NPHP3-205ENST00000471145 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
NPHP3-205ENST00000471145 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
NPHP3-205ENST00000471145 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-205ENST00000471145 PCDHB8Q9UN66 801 aa12.09□□□□□ -0.47
NPHP3-205ENST00000471145 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
NPHP3-205ENST00000471145 TTLL13PA6NNM8 815 aa12.06□□□□□ -0.48
NPHP3-205ENST00000471145 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
NPHP3-205ENST00000471145 ATN1P54259 1190 aaPredicted RBP12.05□□□□□ -0.48
NPHP3-205ENST00000471145 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
NPHP3-205ENST00000471145 C7P10643 843 aa12.02□□□□□ -0.49
NPHP3-205ENST00000471145 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
NPHP3-205ENST00000471145 PDAP1Q13442 181 aaKnown RBP11.99□□□□□ -0.49
NPHP3-205ENST00000471145 PKD2Q13563 968 aa11.98□□□□□ -0.49
NPHP3-205ENST00000471145 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
NPHP3-205ENST00000471145 PSEN1P49768 467 aa11.97□□□□□ -0.49
NPHP3-205ENST00000471145 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
NPHP3-205ENST00000471145 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
NPHP3-205ENST00000471145 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
NPHP3-205ENST00000471145 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
NPHP3-205ENST00000471145 IER5LQ5T953 404 aa11.94□□□□□ -0.5
NPHP3-205ENST00000471145 LHX8Q68G74 356 aa11.94□□□□□ -0.5
NPHP3-205ENST00000471145 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
NPHP3-205ENST00000471145 TAOK2Q9UL54 1235 aa11.9□□□□□ -0.5
NPHP3-205ENST00000471145 VGFO15240 615 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-205ENST00000471145 SEC24BO95487 1268 aa11.86□□□□□ -0.51
NPHP3-205ENST00000471145 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
NPHP3-205ENST00000471145 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
NPHP3-205ENST00000471145 MKRN3Q13064 507 aaKnown RBP11.84□□□□□ -0.51
NPHP3-205ENST00000471145 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
NPHP3-205ENST00000471145 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
NPHP3-205ENST00000471145 RGL2O15211 777 aa11.82□□□□□ -0.52
NPHP3-205ENST00000471145 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
NPHP3-205ENST00000471145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
NPHP3-205ENST00000471145 ZFP91Q96JP5 570 aaPredicted RBP11.81□□□□□ -0.52
NPHP3-205ENST00000471145 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
NPHP3-205ENST00000471145 PLCG2P16885 1265 aa11.8□□□□□ -0.52
NPHP3-205ENST00000471145 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
NPHP3-205ENST00000471145 MAMSTRQ6ZN01 415 aa11.75□□□□□ -0.53
NPHP3-205ENST00000471145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.532e-10■■■□□ 15.2
NPHP3-205ENST00000471145 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
NPHP3-205ENST00000471145 EFCAB3Q8N7B9 438 aa11.73□□□□□ -0.53
NPHP3-205ENST00000471145 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
NPHP3-205ENST00000471145 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
NPHP3-205ENST00000471145 STK25O00506 426 aa11.71□□□□□ -0.53
NPHP3-205ENST00000471145 SOX12O15370 315 aa11.71□□□□□ -0.53
NPHP3-205ENST00000471145 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
NPHP3-205ENST00000471145 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
NPHP3-205ENST00000471145 STK24Q9Y6E0 443 aa11.7□□□□□ -0.54
NPHP3-205ENST00000471145 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
NPHP3-205ENST00000471145 L3MBTL3Q96JM7 780 aaPredicted RBP11.66□□□□□ -0.54
NPHP3-205ENST00000471145 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
NPHP3-205ENST00000471145 NLRP6P59044 892 aa11.6□□□□□ -0.55
NPHP3-205ENST00000471145 DPY19L2Q6NUT2 758 aa11.59□□□□□ -0.55
NPHP3-205ENST00000471145 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
NPHP3-205ENST00000471145 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
NPHP3-205ENST00000471145 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
NPHP3-205ENST00000471145 G3V3G9 751 aa11.55□□□□□ -0.56
NPHP3-205ENST00000471145 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
NPHP3-205ENST00000471145 MFRPQ9BY79 579 aa11.55□□□□□ -0.56
NPHP3-205ENST00000471145 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
NPHP3-205ENST00000471145 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
NPHP3-205ENST00000471145 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
NPHP3-205ENST00000471145 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
NPHP3-205ENST00000471145 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
NPHP3-205ENST00000471145 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
NPHP3-205ENST00000471145 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
NPHP3-205ENST00000471145 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
NPHP3-205ENST00000471145 MICALL2Q8IY33 904 aa11.45□□□□□ -0.58
NPHP3-205ENST00000471145 RYDENQ9NUL5 291 aaKnown RBP11.43□□□□□ -0.58
NPHP3-205ENST00000471145 NKX1-1Q15270 411 aaPredicted RBP11.42□□□□□ -0.58
NPHP3-205ENST00000471145 SNPHO15079 494 aa11.38□□□□□ -0.59
NPHP3-205ENST00000471145 PPP1R37O75864 691 aa11.36□□□□□ -0.59
NPHP3-205ENST00000471145 FAM163AQ96GL9 167 aaPredicted RBP11.35□□□□□ -0.59
NPHP3-205ENST00000471145 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
NPHP3-205ENST00000471145 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
NPHP3-205ENST00000471145 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
NPHP3-205ENST00000471145 LCE2DQ5TA82 110 aaPredicted RBP11.26□□□□□ -0.61
NPHP3-205ENST00000471145 ST18O60284 1047 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms