RNA–Protein interactions for RNA: ENST00000469122.5

RAB5A-206, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-206ENST00000469122 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
RAB5A-206ENST00000469122 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
RAB5A-206ENST00000469122 POTEJP0CG39 1038 aa13.27□□□□□ -0.29
RAB5A-206ENST00000469122 ASTLQ6HA08 431 aaPredicted RBP13.27□□□□□ -0.29
RAB5A-206ENST00000469122 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
RAB5A-206ENST00000469122 LCE2DQ5TA82 110 aaPredicted RBP13.25□□□□□ -0.29
RAB5A-206ENST00000469122 C7P10643 843 aa13.24□□□□□ -0.29
RAB5A-206ENST00000469122 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
RAB5A-206ENST00000469122 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
RAB5A-206ENST00000469122 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
RAB5A-206ENST00000469122 ATMINO43313 823 aaPredicted RBP13.2□□□□□ -0.3
RAB5A-206ENST00000469122 MIER1Q8N108 512 aa13.19□□□□□ -0.3
RAB5A-206ENST00000469122 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
RAB5A-206ENST00000469122 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
RAB5A-206ENST00000469122 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
RAB5A-206ENST00000469122 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
RAB5A-206ENST00000469122 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
RAB5A-206ENST00000469122 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
RAB5A-206ENST00000469122 MS4A3Q96HJ5 214 aa13.14□□□□□ -0.31
RAB5A-206ENST00000469122 FAM163AQ96GL9 167 aaPredicted RBP13.1□□□□□ -0.31
RAB5A-206ENST00000469122 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.32
RAB5A-206ENST00000469122 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
RAB5A-206ENST00000469122 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
RAB5A-206ENST00000469122 ATN1P54259 1190 aaPredicted RBP13□□□□□ -0.33
RAB5A-206ENST00000469122 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
RAB5A-206ENST00000469122 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
RAB5A-206ENST00000469122 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
RAB5A-206ENST00000469122 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
RAB5A-206ENST00000469122 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
RAB5A-206ENST00000469122 KIF12Q96FN5 646 aa12.88□□□□□ -0.35
RAB5A-206ENST00000469122 TIE1P35590 1138 aa12.83□□□□□ -0.36
RAB5A-206ENST00000469122 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
RAB5A-206ENST00000469122 TRPC6Q9Y210 931 aa12.8□□□□□ -0.36
RAB5A-206ENST00000469122 PKD2Q13563 968 aa12.78□□□□□ -0.36
RAB5A-206ENST00000469122 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
RAB5A-206ENST00000469122 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
RAB5A-206ENST00000469122 GSE1Q14687 1217 aa12.75□□□□□ -0.37
RAB5A-206ENST00000469122 NUBP1P53384 320 aa12.74□□□□□ -0.37
RAB5A-206ENST00000469122 MAP3K13O43283 966 aa12.73□□□□□ -0.37
RAB5A-206ENST00000469122 DCAF8Q5TAQ9 597 aa12.73□□□□□ -0.37
RAB5A-206ENST00000469122 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
RAB5A-206ENST00000469122 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
RAB5A-206ENST00000469122 SEC24BO95487 1268 aa12.72□□□□□ -0.37
RAB5A-206ENST00000469122 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
RAB5A-206ENST00000469122 IER5LQ5T953 404 aa12.72□□□□□ -0.37
RAB5A-206ENST00000469122 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
RAB5A-206ENST00000469122 ST18O60284 1047 aa12.71□□□□□ -0.37
RAB5A-206ENST00000469122 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
RAB5A-206ENST00000469122 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
RAB5A-206ENST00000469122 SPNS2Q8IVW8 549 aa12.65□□□□□ -0.38
RAB5A-206ENST00000469122 SLAIN1Q8ND83 568 aa12.64□□□□□ -0.39
RAB5A-206ENST00000469122 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
RAB5A-206ENST00000469122 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
RAB5A-206ENST00000469122 TMEM121BQ9BXQ6 578 aaPredicted RBP12.58□□□□□ -0.4
RAB5A-206ENST00000469122 RGL2O15211 777 aa12.56□□□□□ -0.4
RAB5A-206ENST00000469122 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
RAB5A-206ENST00000469122 PYGBP11216 843 aa12.5□□□□□ -0.41
RAB5A-206ENST00000469122 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
RAB5A-206ENST00000469122 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
RAB5A-206ENST00000469122 PLCG2P16885 1265 aa12.46□□□□□ -0.41
RAB5A-206ENST00000469122 IRX5P78411 483 aaPredicted RBP12.46□□□□□ -0.41
RAB5A-206ENST00000469122 IFNL1Q8IU54 200 aa12.46□□□□□ -0.41
RAB5A-206ENST00000469122 RIOK3O14730 519 aaKnown RBP12.45□□□□□ -0.42
RAB5A-206ENST00000469122 SNPHO15079 494 aa12.45□□□□□ -0.42
RAB5A-206ENST00000469122 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
RAB5A-206ENST00000469122 RNF25Q96BH1 459 aaPredicted RBP12.41□□□□□ -0.42
RAB5A-206ENST00000469122 CHGAP10645 457 aaKnown RBP12.39□□□□□ -0.43
RAB5A-206ENST00000469122 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
RAB5A-206ENST00000469122 ZNF467Q7Z7K2 595 aaPredicted RBP12.37□□□□□ -0.43
RAB5A-206ENST00000469122 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
RAB5A-206ENST00000469122 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
RAB5A-206ENST00000469122 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
RAB5A-206ENST00000469122 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
RAB5A-206ENST00000469122 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
RAB5A-206ENST00000469122 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
RAB5A-206ENST00000469122 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
RAB5A-206ENST00000469122 STK25O00506 426 aa12.3□□□□□ -0.44
RAB5A-206ENST00000469122 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
RAB5A-206ENST00000469122 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
RAB5A-206ENST00000469122 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
RAB5A-206ENST00000469122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
RAB5A-206ENST00000469122 PLCB2Q00722 1185 aa12.27□□□□□ -0.45
RAB5A-206ENST00000469122 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
RAB5A-206ENST00000469122 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
RAB5A-206ENST00000469122 EMP3P54852 163 aa12.24□□□□□ -0.45
RAB5A-206ENST00000469122 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
RAB5A-206ENST00000469122 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
RAB5A-206ENST00000469122 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
RAB5A-206ENST00000469122 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
RAB5A-206ENST00000469122 PSEN1P49768 467 aa12.2□□□□□ -0.46
RAB5A-206ENST00000469122 PAXIP1Q6ZW49 1069 aaPredicted RBP12.2□□□□□ -0.46
RAB5A-206ENST00000469122 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
RAB5A-206ENST00000469122 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
RAB5A-206ENST00000469122 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
RAB5A-206ENST00000469122 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
RAB5A-206ENST00000469122 HAP1P54257 671 aaPredicted RBP12.15□□□□□ -0.46
RAB5A-206ENST00000469122 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
RAB5A-206ENST00000469122 FAM205CA6NFA0 338 aa12.13□□□□□ -0.47
RAB5A-206ENST00000469122 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
RAB5A-206ENST00000469122 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms