RNA–Protein interactions for RNA: ENST00000469122.5

RAB5A-206, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-206ENST00000469122 AEBP2Q6ZN18 517 aaPredicted RBP27.43■■□□□ 1.98
RAB5A-206ENST00000469122 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
RAB5A-206ENST00000469122 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
RAB5A-206ENST00000469122 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
RAB5A-206ENST00000469122 FOXD1Q16676 465 aa22■■□□□ 1.11
RAB5A-206ENST00000469122 POTEDQ86YR6 584 aa21.61■■□□□ 1.05
RAB5A-206ENST00000469122 MSH5O43196 834 aa20.9■□□□□ 0.94
RAB5A-206ENST00000469122 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
RAB5A-206ENST00000469122 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
RAB5A-206ENST00000469122 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
RAB5A-206ENST00000469122 ADRA2BP18089 450 aa19.85■□□□□ 0.77
RAB5A-206ENST00000469122 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
RAB5A-206ENST00000469122 MAPK8IP2Q13387 824 aaPredicted RBP18.46■□□□□ 0.55
RAB5A-206ENST00000469122 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
RAB5A-206ENST00000469122 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
RAB5A-206ENST00000469122 RNF39Q9H2S5 420 aa17.77■□□□□ 0.44
RAB5A-206ENST00000469122 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
RAB5A-206ENST00000469122 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
RAB5A-206ENST00000469122 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
RAB5A-206ENST00000469122 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
RAB5A-206ENST00000469122 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
RAB5A-206ENST00000469122 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
RAB5A-206ENST00000469122 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
RAB5A-206ENST00000469122 KCNA4P22459 653 aa16.82■□□□□ 0.28
RAB5A-206ENST00000469122 POTEHQ6S545 545 aa16.78■□□□□ 0.28
RAB5A-206ENST00000469122 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
RAB5A-206ENST00000469122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
RAB5A-206ENST00000469122 DSG3P32926 999 aa16.38■□□□□ 0.21
RAB5A-206ENST00000469122 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
RAB5A-206ENST00000469122 U3KPZ7 1027 aaPredicted RBP16.3■□□□□ 0.2
RAB5A-206ENST00000469122 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
RAB5A-206ENST00000469122 CAPN15O75808 1086 aa16.2■□□□□ 0.18
RAB5A-206ENST00000469122 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
RAB5A-206ENST00000469122 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
RAB5A-206ENST00000469122 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
RAB5A-206ENST00000469122 APLP2Q06481 763 aa15.78■□□□□ 0.12
RAB5A-206ENST00000469122 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
RAB5A-206ENST00000469122 ABCB7O75027 752 aa15.75■□□□□ 0.11
RAB5A-206ENST00000469122 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
RAB5A-206ENST00000469122 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
RAB5A-206ENST00000469122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
RAB5A-206ENST00000469122 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
RAB5A-206ENST00000469122 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
RAB5A-206ENST00000469122 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
RAB5A-206ENST00000469122 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
RAB5A-206ENST00000469122 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
RAB5A-206ENST00000469122 ZBTB22O15209 634 aa15.43■□□□□ 0.06
RAB5A-206ENST00000469122 SP7Q8TDD2 431 aaPredicted RBP15.4■□□□□ 0.06
RAB5A-206ENST00000469122 POLA2Q14181 598 aa15.23■□□□□ 0.03
RAB5A-206ENST00000469122 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
RAB5A-206ENST00000469122 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
RAB5A-206ENST00000469122 PIP4P2Q8N4L2 257 aa15.05■□□□□ -0
RAB5A-206ENST00000469122 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
RAB5A-206ENST00000469122 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
RAB5A-206ENST00000469122 HAX1O00165 279 aa14.91□□□□□ -0.02
RAB5A-206ENST00000469122 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
RAB5A-206ENST00000469122 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
RAB5A-206ENST00000469122 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
RAB5A-206ENST00000469122 PITPNM1O00562 1244 aa14.82□□□□□ -0.04
RAB5A-206ENST00000469122 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
RAB5A-206ENST00000469122 EVX2Q03828 476 aa14.71□□□□□ -0.05
RAB5A-206ENST00000469122 C19orf67A6NJJ6 358 aa14.43□□□□□ -0.1
RAB5A-206ENST00000469122 LHX8Q68G74 356 aa14.41□□□□□ -0.1
RAB5A-206ENST00000469122 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
RAB5A-206ENST00000469122 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
RAB5A-206ENST00000469122 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
RAB5A-206ENST00000469122 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
RAB5A-206ENST00000469122 GABBR2O75899 941 aa14.36□□□□□ -0.11
RAB5A-206ENST00000469122 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
RAB5A-206ENST00000469122 FBLN2P98095 1184 aa14.23□□□□□ -0.13
RAB5A-206ENST00000469122 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
RAB5A-206ENST00000469122 SSUH2Q9Y2M2 353 aa14.14□□□□□ -0.15
RAB5A-206ENST00000469122 FKBP8Q14318 412 aa14.12□□□□□ -0.15
RAB5A-206ENST00000469122 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
RAB5A-206ENST00000469122 POTEIP0CG38 1075 aa14.06□□□□□ -0.16
RAB5A-206ENST00000469122 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
RAB5A-206ENST00000469122 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
RAB5A-206ENST00000469122 PLSCR2Q9NRY7 297 aa14□□□□□ -0.17
RAB5A-206ENST00000469122 CLCN6P51797 869 aa13.98□□□□□ -0.17
RAB5A-206ENST00000469122 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
RAB5A-206ENST00000469122 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
RAB5A-206ENST00000469122 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
RAB5A-206ENST00000469122 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
RAB5A-206ENST00000469122 FARP1Q9Y4F1 1045 aaPredicted RBP13.83□□□□□ -0.2
RAB5A-206ENST00000469122 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
RAB5A-206ENST00000469122 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
RAB5A-206ENST00000469122 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
RAB5A-206ENST00000469122 PROM2Q8N271 834 aa13.61□□□□□ -0.23
RAB5A-206ENST00000469122 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
RAB5A-206ENST00000469122 POTEMA6NI47 508 aa13.59□□□□□ -0.23
RAB5A-206ENST00000469122 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
RAB5A-206ENST00000469122 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
RAB5A-206ENST00000469122 GALR2O43603 387 aaPredicted RBP13.54□□□□□ -0.24
RAB5A-206ENST00000469122 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
RAB5A-206ENST00000469122 PCDH10Q9P2E7 1040 aa13.51□□□□□ -0.25
RAB5A-206ENST00000469122 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
RAB5A-206ENST00000469122 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
RAB5A-206ENST00000469122 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
RAB5A-206ENST00000469122 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
RAB5A-206ENST00000469122 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms