RNA–Protein interactions for RNA: ENST00000468977.5

CCNL1-211, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-211ENST00000468977 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
CCNL1-211ENST00000468977 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
CCNL1-211ENST00000468977 POTEMA6NI47 508 aa13.33□□□□□ -0.28
CCNL1-211ENST00000468977 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
CCNL1-211ENST00000468977 METRNQ9UJH8 293 aa13.33□□□□□ -0.28
CCNL1-211ENST00000468977 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
CCNL1-211ENST00000468977 C7P10643 843 aa13.31□□□□□ -0.28
CCNL1-211ENST00000468977 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
CCNL1-211ENST00000468977 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
CCNL1-211ENST00000468977 MIER1Q8N108 512 aa13.25□□□□□ -0.29
CCNL1-211ENST00000468977 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
CCNL1-211ENST00000468977 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
CCNL1-211ENST00000468977 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
CCNL1-211ENST00000468977 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
CCNL1-211ENST00000468977 PLCD3Q8N3E9 789 aa13.22□□□□□ -0.29
CCNL1-211ENST00000468977 KIF12Q96FN5 646 aa13.21□□□□□ -0.29
CCNL1-211ENST00000468977 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
CCNL1-211ENST00000468977 PCDH10Q9P2E7 1040 aa13.17□□□□□ -0.3
CCNL1-211ENST00000468977 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
CCNL1-211ENST00000468977 LCE2DQ5TA82 110 aaPredicted RBP13.16□□□□□ -0.3
CCNL1-211ENST00000468977 BMP2KQ9NSY1 1161 aaPredicted RBP13.14□□□□□ -0.31
CCNL1-211ENST00000468977 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
CCNL1-211ENST00000468977 MAP3K13O43283 966 aa13.09□□□□□ -0.31
CCNL1-211ENST00000468977 TIE1P35590 1138 aa13.09□□□□□ -0.31
CCNL1-211ENST00000468977 SCUBE2Q9NQ36 999 aa13.09□□□□□ -0.31
CCNL1-211ENST00000468977 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
CCNL1-211ENST00000468977 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
CCNL1-211ENST00000468977 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
CCNL1-211ENST00000468977 FAM163AQ96GL9 167 aaPredicted RBP13.03□□□□□ -0.32
CCNL1-211ENST00000468977 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
CCNL1-211ENST00000468977 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
CCNL1-211ENST00000468977 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
CCNL1-211ENST00000468977 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
CCNL1-211ENST00000468977 IER5LQ5T953 404 aa12.91□□□□□ -0.34
CCNL1-211ENST00000468977 SEC24BO95487 1268 aa12.9□□□□□ -0.34
CCNL1-211ENST00000468977 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
CCNL1-211ENST00000468977 NUBP1P53384 320 aa12.89□□□□□ -0.35
CCNL1-211ENST00000468977 SPOCK2Q92563 424 aa12.88□□□□□ -0.35
CCNL1-211ENST00000468977 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
CCNL1-211ENST00000468977 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
CCNL1-211ENST00000468977 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
CCNL1-211ENST00000468977 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
CCNL1-211ENST00000468977 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
CCNL1-211ENST00000468977 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
CCNL1-211ENST00000468977 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
CCNL1-211ENST00000468977 ST18O60284 1047 aa12.73□□□□□ -0.37
CCNL1-211ENST00000468977 IRX5P78411 483 aaPredicted RBP12.73□□□□□ -0.37
CCNL1-211ENST00000468977 GSE1Q14687 1217 aa12.72□□□□□ -0.37
CCNL1-211ENST00000468977 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
CCNL1-211ENST00000468977 PLCG2P16885 1265 aa12.7□□□□□ -0.38
CCNL1-211ENST00000468977 PYGBP11216 843 aa12.65□□□□□ -0.38
CCNL1-211ENST00000468977 PKD2Q13563 968 aa12.63□□□□□ -0.39
CCNL1-211ENST00000468977 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
CCNL1-211ENST00000468977 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
CCNL1-211ENST00000468977 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
CCNL1-211ENST00000468977 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
CCNL1-211ENST00000468977 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
CCNL1-211ENST00000468977 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
CCNL1-211ENST00000468977 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
CCNL1-211ENST00000468977 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.52□□□□□ -0.41
CCNL1-211ENST00000468977 SNPHO15079 494 aa12.51□□□□□ -0.41
CCNL1-211ENST00000468977 MMRN1Q13201 1228 aa12.5□□□□□ -0.41
CCNL1-211ENST00000468977 SPNS2Q8IVW8 549 aa12.5□□□□□ -0.41
CCNL1-211ENST00000468977 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
CCNL1-211ENST00000468977 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
CCNL1-211ENST00000468977 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
CCNL1-211ENST00000468977 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
CCNL1-211ENST00000468977 RNF25Q96BH1 459 aaPredicted RBP12.43□□□□□ -0.42
CCNL1-211ENST00000468977 RGL2O15211 777 aa12.41□□□□□ -0.42
CCNL1-211ENST00000468977 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
CCNL1-211ENST00000468977 RIOK3O14730 519 aaKnown RBP12.35□□□□□ -0.43
CCNL1-211ENST00000468977 MKRN3Q13064 507 aaKnown RBP12.35□□□□□ -0.43
CCNL1-211ENST00000468977 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
CCNL1-211ENST00000468977 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
CCNL1-211ENST00000468977 POTEB3A0JP26 581 aa12.33□□□□□ -0.44
CCNL1-211ENST00000468977 PSEN1P49768 467 aa12.33□□□□□ -0.44
CCNL1-211ENST00000468977 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
CCNL1-211ENST00000468977 POTEBQ6S5H4 581 aa12.33□□□□□ -0.44
CCNL1-211ENST00000468977 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
CCNL1-211ENST00000468977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.442e-10■■■□□ 16.8
CCNL1-211ENST00000468977 EMP3P54852 163 aa12.3□□□□□ -0.44
CCNL1-211ENST00000468977 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
CCNL1-211ENST00000468977 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
CCNL1-211ENST00000468977 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
CCNL1-211ENST00000468977 HS3ST6Q96QI5 342 aa12.28□□□□□ -0.44
CCNL1-211ENST00000468977 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
CCNL1-211ENST00000468977 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.24□□□□□ -0.45
CCNL1-211ENST00000468977 FAM205CA6NFA0 338 aa12.24□□□□□ -0.45
CCNL1-211ENST00000468977 ZFP91Q96JP5 570 aaPredicted RBP12.24□□□□□ -0.45
CCNL1-211ENST00000468977 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
CCNL1-211ENST00000468977 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
CCNL1-211ENST00000468977 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
CCNL1-211ENST00000468977 STK25O00506 426 aa12.17□□□□□ -0.46
CCNL1-211ENST00000468977 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
CCNL1-211ENST00000468977 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
CCNL1-211ENST00000468977 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
CCNL1-211ENST00000468977 BOLA1Q9Y3E2 137 aa12.15□□□□□ -0.46
CCNL1-211ENST00000468977 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
CCNL1-211ENST00000468977 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
CCNL1-211ENST00000468977 HOXB1P14653 301 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms