RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
UBA3-208ENST00000465627 TOP2BQ02880 1626 aa14.86□□□□□ -0.03
UBA3-208ENST00000465627 CUX1P39880 1505 aa14.86□□□□□ -0.03
UBA3-208ENST00000465627 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.031e-9■■■■■ 37.7
UBA3-208ENST00000465627 GAPVD1Q14C86 1478 aa14.85□□□□□ -0.03
UBA3-208ENST00000465627 DISP3Q9P2K9 1392 aa14.79□□□□□ -0.04
UBA3-208ENST00000465627 SYNJ2O15056 1496 aa14.79□□□□□ -0.04
UBA3-208ENST00000465627 ADGRL1O94910 1474 aa14.76□□□□□ -0.05
UBA3-208ENST00000465627 KCNA4P22459 653 aa14.76□□□□□ -0.05
UBA3-208ENST00000465627 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
UBA3-208ENST00000465627 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
UBA3-208ENST00000465627 KDM6BO15054 1643 aa14.75□□□□□ -0.05
UBA3-208ENST00000465627 TOPBP1Q92547 1522 aa14.74□□□□□ -0.05
UBA3-208ENST00000465627 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
UBA3-208ENST00000465627 SOGA1O94964 1423 aa14.68□□□□□ -0.06
UBA3-208ENST00000465627 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
UBA3-208ENST00000465627 RUSC2Q8N2Y8 1516 aa14.65□□□□□ -0.06
UBA3-208ENST00000465627 POLA1P09884 1462 aaPredicted RBP14.65□□□□□ -0.06
UBA3-208ENST00000465627 SNAPC4Q5SXM2 1469 aa14.64□□□□□ -0.07
UBA3-208ENST00000465627 TSPOAP1O95153 1857 aa14.64□□□□□ -0.07
UBA3-208ENST00000465627 EEA1Q15075 1411 aa14.63□□□□□ -0.07
UBA3-208ENST00000465627 FAM69CQ0P6D2 419 aa14.62□□□□□ -0.07
UBA3-208ENST00000465627 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
UBA3-208ENST00000465627 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
UBA3-208ENST00000465627 CAPN15O75808 1086 aa14.6□□□□□ -0.07
UBA3-208ENST00000465627 ABCA10Q8WWZ4 1543 aa14.58□□□□□ -0.07
UBA3-208ENST00000465627 ABCC10Q5T3U5 1492 aa14.56□□□□□ -0.08
UBA3-208ENST00000465627 RAD54L2Q9Y4B4 1467 aa14.56□□□□□ -0.08
UBA3-208ENST00000465627 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
UBA3-208ENST00000465627 TDRD9Q8NDG6 1382 aaKnown RBP14.55□□□□□ -0.08
UBA3-208ENST00000465627 DIP2BQ9P265 1576 aa14.54□□□□□ -0.08
UBA3-208ENST00000465627 SPATA31D1Q6ZQQ2 1576 aa14.53□□□□□ -0.08
UBA3-208ENST00000465627 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
UBA3-208ENST00000465627 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
UBA3-208ENST00000465627 ABCA5Q8WWZ7 1642 aa14.51□□□□□ -0.09
UBA3-208ENST00000465627 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
UBA3-208ENST00000465627 DSG3P32926 999 aa14.5□□□□□ -0.09
UBA3-208ENST00000465627 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
UBA3-208ENST00000465627 KIF21BO75037 1637 aa14.49□□□□□ -0.09
UBA3-208ENST00000465627 PRXQ9BXM0 1461 aa14.48□□□□□ -0.09
UBA3-208ENST00000465627 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
UBA3-208ENST00000465627 IGF1RP08069 1367 aa14.46□□□□□ -0.09
UBA3-208ENST00000465627 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
UBA3-208ENST00000465627 APLP2Q06481 763 aa14.45□□□□□ -0.1
UBA3-208ENST00000465627 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
UBA3-208ENST00000465627 ERICH3Q5RHP9 1530 aa14.42□□□□□ -0.1
UBA3-208ENST00000465627 GOLGA3Q08378 1498 aa14.4□□□□□ -0.1
UBA3-208ENST00000465627 RAPGEF2Q9Y4G8 1499 aa14.39□□□□□ -0.11
UBA3-208ENST00000465627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
UBA3-208ENST00000465627 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
UBA3-208ENST00000465627 MAPKBP1O60336 1514 aa14.38□□□□□ -0.11
UBA3-208ENST00000465627 CUL7Q14999 1698 aa14.37□□□□□ -0.11
UBA3-208ENST00000465627 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
UBA3-208ENST00000465627 GRIN2BQ13224 1484 aa14.35□□□□□ -0.11
UBA3-208ENST00000465627 TNIKQ9UKE5 1360 aa14.34□□□□□ -0.11
UBA3-208ENST00000465627 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
UBA3-208ENST00000465627 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.11
UBA3-208ENST00000465627 PPRC1Q5VV67 1664 aaKnown RBP14.33□□□□□ -0.12
UBA3-208ENST00000465627 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
UBA3-208ENST00000465627 CERKQ8TCT0 537 aa14.32□□□□□ -0.12
UBA3-208ENST00000465627 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
UBA3-208ENST00000465627 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
UBA3-208ENST00000465627 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.12
UBA3-208ENST00000465627 ADCY10Q96PN6 1610 aa14.27□□□□□ -0.13
UBA3-208ENST00000465627 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBA3-208ENST00000465627 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
UBA3-208ENST00000465627 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
UBA3-208ENST00000465627 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
UBA3-208ENST00000465627 ABCB7O75027 752 aa14.22□□□□□ -0.13
UBA3-208ENST00000465627 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
UBA3-208ENST00000465627 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
UBA3-208ENST00000465627 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
UBA3-208ENST00000465627 NUP160Q12769 1436 aa14.18□□□□□ -0.14
UBA3-208ENST00000465627 PRG4Q92954 1404 aaPredicted RBP14.18□□□□□ -0.14
UBA3-208ENST00000465627 PCF11O94913 1555 aaKnown RBP14.16□□□□□ -0.14
UBA3-208ENST00000465627 CLIP1P30622 1438 aa14.14□□□□□ -0.15
UBA3-208ENST00000465627 PTPRMP28827 1452 aa14.11□□□□□ -0.15
UBA3-208ENST00000465627 ARHGAP35Q9NRY4 1499 aa14.11□□□□□ -0.15
UBA3-208ENST00000465627 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
UBA3-208ENST00000465627 HSPA2P54652 639 aa14.09□□□□□ -0.15
UBA3-208ENST00000465627 POTEHQ6S545 545 aa14.09□□□□□ -0.15
UBA3-208ENST00000465627 SAMD9Q5K651 1589 aa14.07□□□□□ -0.16
UBA3-208ENST00000465627 KIAA0586Q9BVV6 1533 aa14.07□□□□□ -0.16
UBA3-208ENST00000465627 IQGAP2Q13576 1575 aa14.07□□□□□ -0.16
UBA3-208ENST00000465627 EFCAB5A4FU69 1503 aa14.06□□□□□ -0.16
UBA3-208ENST00000465627 GLI2P10070 1586 aa14.05□□□□□ -0.16
UBA3-208ENST00000465627 UGGT2Q9NYU1 1516 aa14.05□□□□□ -0.16
UBA3-208ENST00000465627 ADAMTSL3P82987 1691 aa14.03□□□□□ -0.16
UBA3-208ENST00000465627 JPH4Q96JJ6 628 aa14.03□□□□□ -0.16
UBA3-208ENST00000465627 VPS8Q8N3P4 1428 aa14.02□□□□□ -0.16
UBA3-208ENST00000465627 MAP3K4Q9Y6R4 1608 aa14□□□□□ -0.17
UBA3-208ENST00000465627 DISP1Q96F81 1524 aa13.98□□□□□ -0.17
UBA3-208ENST00000465627 ASXL2Q76L83 1435 aa13.97□□□□□ -0.17
UBA3-208ENST00000465627 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.18
UBA3-208ENST00000465627 KIAA0556O60303 1618 aa13.95□□□□□ -0.18
UBA3-208ENST00000465627 FHOD3Q2V2M9 1422 aa13.95□□□□□ -0.18
UBA3-208ENST00000465627 RANGAP1P46060 587 aaPredicted RBP13.93□□□□□ -0.18
UBA3-208ENST00000465627 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
UBA3-208ENST00000465627 TEX14Q8IWB6 1497 aa13.92□□□□□ -0.18
UBA3-208ENST00000465627 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms