RNA–Protein interactions for RNA: ENST00000463563.6

U2SURP-203, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 2

Gene U2SURP, Length 4,364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-203ENST00000463563 LMOD2Q6P5Q4 547 aa4.44□□□□□ -1.7
U2SURP-203ENST00000463563 C1orf115Q9H7X2 142 aa4.42□□□□□ -1.7
U2SURP-203ENST00000463563 NEUROD2Q15784 382 aa4.39□□□□□ -1.71
U2SURP-203ENST00000463563 KCNV2Q8TDN2 545 aa4.39□□□□□ -1.71
U2SURP-203ENST00000463563 ZC3H15Q8WU90 426 aaKnown RBP4.39□□□□□ -1.71
U2SURP-203ENST00000463563 CIZ1Q9ULV3 898 aaPredicted RBP4.39□□□□□ -1.71
U2SURP-203ENST00000463563 SLC24A3Q9HC58 644 aa4.38□□□□□ -1.71
U2SURP-203ENST00000463563 ZMYND15Q9H091 742 aa4.38□□□□□ -1.71
U2SURP-203ENST00000463563 ARID3AQ99856 593 aa4.38□□□□□ -1.71
U2SURP-203ENST00000463563 NECTIN2Q92692 538 aa4.36□□□□□ -1.71
U2SURP-203ENST00000463563 LOC105371045A0A1W2PR82 267 aa4.36□□□□□ -1.71
U2SURP-203ENST00000463563 PLCD3Q8N3E9 789 aa4.36□□□□□ -1.71
U2SURP-203ENST00000463563 CADPS2Q86UW7 1296 aa4.35□□□□□ -1.71
U2SURP-203ENST00000463563 P3H3Q8IVL6 736 aa4.34□□□□□ -1.71
U2SURP-203ENST00000463563 RSPH6AQ9H0K4 717 aa4.34□□□□□ -1.71
U2SURP-203ENST00000463563 STAG3Q9UJ98 1225 aa4.34□□□□□ -1.71
U2SURP-203ENST00000463563 DCAF8L1A6NGE4 600 aa4.34□□□□□ -1.72
U2SURP-203ENST00000463563 POLA2Q14181 598 aa4.33□□□□□ -1.72
U2SURP-203ENST00000463563 MIER1Q8N108 512 aa4.33□□□□□ -1.72
U2SURP-203ENST00000463563 TRIM41Q8WV44 630 aa4.31□□□□□ -1.72
U2SURP-203ENST00000463563 ARID3CA6NKF2 412 aa4.31□□□□□ -1.72
U2SURP-203ENST00000463563 ZMYND10O75800 440 aa4.31□□□□□ -1.72
U2SURP-203ENST00000463563 CCDC9Q9Y3X0 531 aaKnown RBP4.31□□□□□ -1.72
U2SURP-203ENST00000463563 RIOK3O14730 519 aaKnown RBP4.3□□□□□ -1.72
U2SURP-203ENST00000463563 GPBP1L1Q9HC44 474 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-203ENST00000463563 STK25O00506 426 aa4.29□□□□□ -1.72
U2SURP-203ENST00000463563 ZBTB7CA1YPR0 619 aa4.29□□□□□ -1.72
U2SURP-203ENST00000463563 SPINK5Q9NQ38 1064 aaPredicted RBP4.28□□□□□ -1.72
U2SURP-203ENST00000463563 CDK11BP21127 795 aaKnown RBP4.28□□□□□ -1.72
U2SURP-203ENST00000463563 CDK11AQ9UQ88 783 aaPredicted RBP4.28□□□□□ -1.72
U2SURP-203ENST00000463563 SEMA3EO15041 775 aa4.28□□□□□ -1.72
U2SURP-203ENST00000463563 TESPA1A2RU30 521 aaPredicted RBP4.28□□□□□ -1.73
U2SURP-203ENST00000463563 MKRN3Q13064 507 aaKnown RBP4.28□□□□□ -1.73
U2SURP-203ENST00000463563 IL27Q8NEV9 243 aa4.27□□□□□ -1.73
U2SURP-203ENST00000463563 IGSF3O75054 1194 aa4.26□□□□□ -1.73
U2SURP-203ENST00000463563 NUBP1P53384 320 aa4.26□□□□□ -1.73
U2SURP-203ENST00000463563 SSUH2Q9Y2M2 353 aa4.26□□□□□ -1.73
U2SURP-203ENST00000463563 APBB1O00213 710 aa4.25□□□□□ -1.73
U2SURP-203ENST00000463563 BCL11BQ9C0K0 894 aaPredicted RBP4.25□□□□□ -1.73
U2SURP-203ENST00000463563 PDIA4P13667 645 aaKnown RBP4.25□□□□□ -1.73
U2SURP-203ENST00000463563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.24□□□□□ -1.73
U2SURP-203ENST00000463563 BARGINQ6ZT62 677 aa4.24□□□□□ -1.73
U2SURP-203ENST00000463563 ZFP91Q96JP5 570 aaPredicted RBP4.24□□□□□ -1.73
U2SURP-203ENST00000463563 ZNF692Q9BU19 519 aaPredicted RBP4.24□□□□□ -1.73
U2SURP-203ENST00000463563 VGFO15240 615 aaPredicted RBP4.24□□□□□ -1.73
U2SURP-203ENST00000463563 ARHGEF1Q92888 912 aaKnown RBP4.24□□□□□ -1.73
U2SURP-203ENST00000463563 SGIP1Q9BQI5 828 aa4.24□□□□□ -1.73
U2SURP-203ENST00000463563 PABPN1Q86U42 306 aaKnown RBP eCLIP4.23□□□□□ -1.73
U2SURP-203ENST00000463563 KDM4CQ9H3R0 1056 aa4.23□□□□□ -1.73
U2SURP-203ENST00000463563 STK24Q9Y6E0 443 aa4.23□□□□□ -1.73
U2SURP-203ENST00000463563 GSE1Q14687 1217 aa4.23□□□□□ -1.73
U2SURP-203ENST00000463563 RGS22Q8NE09 1264 aa4.23□□□□□ -1.73
U2SURP-203ENST00000463563 PLEKHG5O94827 1062 aa4.22□□□□□ -1.73
U2SURP-203ENST00000463563 WDR70Q9NW82 654 aa4.22□□□□□ -1.73
U2SURP-203ENST00000463563 ZBTB47Q9UFB7 747 aaPredicted RBP4.22□□□□□ -1.73
U2SURP-203ENST00000463563 HMGB1P09429 215 aaKnown RBP4.21□□□□□ -1.73
U2SURP-203ENST00000463563 CCDC82Q8N4S0 544 aa4.21□□□□□ -1.73
U2SURP-203ENST00000463563 ONECUT3O60422 494 aaPredicted RBP4.21□□□□□ -1.74
U2SURP-203ENST00000463563 SHROOM4Q9ULL8 1493 aa4.2□□□□□ -1.74
U2SURP-203ENST00000463563 RYDENQ9NUL5 291 aaKnown RBP4.2□□□□□ -1.74
U2SURP-203ENST00000463563 ZNF428Q96B54 188 aa4.2□□□□□ -1.74
U2SURP-203ENST00000463563 AK7Q96M32 723 aa4.19□□□□□ -1.74
U2SURP-203ENST00000463563 POLR3GLQ9BT43 218 aa4.19□□□□□ -1.74
U2SURP-203ENST00000463563 KCTD17Q8N5Z5 321 aa4.19□□□□□ -1.74
U2SURP-203ENST00000463563 CHRM1P11229 460 aaPredicted RBP4.18□□□□□ -1.74
U2SURP-203ENST00000463563 FAM117AQ9C073 453 aa4.18□□□□□ -1.74
U2SURP-203ENST00000463563 PLEKHG3A1L390 1219 aa4.18□□□□□ -1.74
U2SURP-203ENST00000463563 OSCARQ8IYS5 282 aa4.18□□□□□ -1.74
U2SURP-203ENST00000463563 E2F4Q16254 413 aa4.18□□□□□ -1.74
U2SURP-203ENST00000463563 TRIM66O15016 1216 aa4.17□□□□□ -1.74
U2SURP-203ENST00000463563 HSP90B1P14625 803 aaKnown RBP4.17□□□□□ -1.74
U2SURP-203ENST00000463563 PDE4DQ08499 809 aa4.17□□□□□ -1.74
U2SURP-203ENST00000463563 DCAF8Q5TAQ9 597 aa4.17□□□□□ -1.74
U2SURP-203ENST00000463563 CLUAP1Q96AJ1 413 aa4.17□□□□□ -1.74
U2SURP-203ENST00000463563 TRAIPQ9BWF2 469 aa4.17□□□□□ -1.74
U2SURP-203ENST00000463563 MTMR7Q9Y216 660 aa4.17□□□□□ -1.74
U2SURP-203ENST00000463563 ZBTB12Q9Y330 459 aaPredicted RBP4.17□□□□□ -1.74
U2SURP-203ENST00000463563 SPDYE2BA6NHP3 402 aa4.16□□□□□ -1.74
U2SURP-203ENST00000463563 RAD21O60216 631 aa4.16□□□□□ -1.74
U2SURP-203ENST00000463563 SPDYE6P0CI01 402 aa4.16□□□□□ -1.74
U2SURP-203ENST00000463563 SPDYE2Q495Y8 402 aa4.16□□□□□ -1.74
U2SURP-203ENST00000463563 TRAK2O60296 914 aa4.16□□□□□ -1.74
U2SURP-203ENST00000463563 ABCB7O75027 752 aa4.16□□□□□ -1.74
U2SURP-203ENST00000463563 CHMP4AQ9BY43 222 aa4.16□□□□□ -1.74
U2SURP-203ENST00000463563 RBM26Q5T8P6 1007 aaKnown RBP4.15□□□□□ -1.74
U2SURP-203ENST00000463563 PPP1R37O75864 691 aa4.15□□□□□ -1.75
U2SURP-203ENST00000463563 MNX1P50219 401 aaPredicted RBP4.14□□□□□ -1.75
U2SURP-203ENST00000463563 MFRPQ9BY79 579 aa4.14□□□□□ -1.75
U2SURP-203ENST00000463563 A6NJR5 290 aa4.14□□□□□ -1.75
U2SURP-203ENST00000463563 FOXD4L5Q5VV16 416 aaPredicted RBP4.14□□□□□ -1.75
U2SURP-203ENST00000463563 FOXD4L4Q8WXT5 416 aaPredicted RBP4.14□□□□□ -1.75
U2SURP-203ENST00000463563 ZNF316A6NFI3 1004 aaPredicted RBP4.14□□□□□ -1.75
U2SURP-203ENST00000463563 RBM25P49756 843 aaKnown RBP4.14□□□□□ -1.75
U2SURP-203ENST00000463563 NCKAP5LQ9HCH0 1330 aa4.13□□□□□ -1.75
U2SURP-203ENST00000463563 CAPN15O75808 1086 aa4.13□□□□□ -1.75
U2SURP-203ENST00000463563 RASEFQ8IZ41 740 aa4.13□□□□□ -1.75
U2SURP-203ENST00000463563 AEBP1Q8IUX7 1158 aa4.13□□□□□ -1.75
U2SURP-203ENST00000463563 MLLT3P42568 568 aaPredicted RBP4.12□□□□□ -1.75
U2SURP-203ENST00000463563 FLIIQ13045 1269 aa4.12□□□□□ -1.75
U2SURP-203ENST00000463563 IRF5Q13568 498 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms