RNA–Protein interactions for RNA: ENST00000462580.1

TUBGCP3-203, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 3

Gene TUBGCP3, Length 915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-203ENST00000462580 NUBP1P53384 320 aa11.52□□□□□ -0.57
TUBGCP3-203ENST00000462580 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
TUBGCP3-203ENST00000462580 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
TUBGCP3-203ENST00000462580 CECR2Q9BXF3 1484 aa11.47□□□□□ -0.57
TUBGCP3-203ENST00000462580 PKD2Q13563 968 aa11.44□□□□□ -0.58
TUBGCP3-203ENST00000462580 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
TUBGCP3-203ENST00000462580 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
TUBGCP3-203ENST00000462580 SMARCA4P51532 1647 aa11.39□□□□□ -0.59
TUBGCP3-203ENST00000462580 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
TUBGCP3-203ENST00000462580 EIF4G1Q04637 1599 aaKnown RBP11.36□□□□□ -0.59
TUBGCP3-203ENST00000462580 BAZ1AQ9NRL2 1556 aaPredicted RBP11.34□□□□□ -0.59
TUBGCP3-203ENST00000462580 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
TUBGCP3-203ENST00000462580 WIZO95785 1651 aa11.33□□□□□ -0.6
TUBGCP3-203ENST00000462580 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
TUBGCP3-203ENST00000462580 GSE1Q14687 1217 aa11.31□□□□□ -0.6
TUBGCP3-203ENST00000462580 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
TUBGCP3-203ENST00000462580 RSF1Q96T23 1441 aaPredicted RBP11.3□□□□□ -0.6
TUBGCP3-203ENST00000462580 TSPYL2Q9H2G4 693 aaPredicted RBP11.29□□□□□ -0.6
TUBGCP3-203ENST00000462580 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
TUBGCP3-203ENST00000462580 POTEHQ6S545 545 aa11.27□□□□□ -0.61
TUBGCP3-203ENST00000462580 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
TUBGCP3-203ENST00000462580 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
TUBGCP3-203ENST00000462580 CC2D2AQ9P2K1 1620 aa11.26□□□□□ -0.61
TUBGCP3-203ENST00000462580 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
TUBGCP3-203ENST00000462580 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
TUBGCP3-203ENST00000462580 EVX2Q03828 476 aa11.22□□□□□ -0.61
TUBGCP3-203ENST00000462580 RGL2O15211 777 aa11.21□□□□□ -0.61
TUBGCP3-203ENST00000462580 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
TUBGCP3-203ENST00000462580 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
TUBGCP3-203ENST00000462580 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
TUBGCP3-203ENST00000462580 PYGBP11216 843 aa11.2□□□□□ -0.62
TUBGCP3-203ENST00000462580 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
TUBGCP3-203ENST00000462580 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
TUBGCP3-203ENST00000462580 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
TUBGCP3-203ENST00000462580 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP3-203ENST00000462580 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
TUBGCP3-203ENST00000462580 HAX1O00165 279 aa11.16□□□□□ -0.62
TUBGCP3-203ENST00000462580 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
TUBGCP3-203ENST00000462580 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
TUBGCP3-203ENST00000462580 TOP2AP11388 1531 aaKnown RBP11.14□□□□□ -0.63
TUBGCP3-203ENST00000462580 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
TUBGCP3-203ENST00000462580 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
TUBGCP3-203ENST00000462580 HMGXB3Q12766 1538 aa11.1□□□□□ -0.63
TUBGCP3-203ENST00000462580 MAP3K13O43283 966 aa11.1□□□□□ -0.63
TUBGCP3-203ENST00000462580 NCAPD3P42695 1498 aa11.08□□□□□ -0.64
TUBGCP3-203ENST00000462580 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
TUBGCP3-203ENST00000462580 IFNL1Q8IU54 200 aa11.05□□□□□ -0.64
TUBGCP3-203ENST00000462580 SGIP1Q9BQI5 828 aa11.05□□□□□ -0.64
TUBGCP3-203ENST00000462580 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
TUBGCP3-203ENST00000462580 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
TUBGCP3-203ENST00000462580 ZNF467Q7Z7K2 595 aaPredicted RBP11.01□□□□□ -0.65
TUBGCP3-203ENST00000462580 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
TUBGCP3-203ENST00000462580 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
TUBGCP3-203ENST00000462580 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
TUBGCP3-203ENST00000462580 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
TUBGCP3-203ENST00000462580 GALR2O43603 387 aaPredicted RBP10.97□□□□□ -0.65
TUBGCP3-203ENST00000462580 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
TUBGCP3-203ENST00000462580 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
TUBGCP3-203ENST00000462580 DAXXQ9UER7 740 aaPredicted RBP10.95□□□□□ -0.66
TUBGCP3-203ENST00000462580 CHGAP10645 457 aaKnown RBP10.94□□□□□ -0.66
TUBGCP3-203ENST00000462580 PDAP1Q13442 181 aaKnown RBP10.94□□□□□ -0.66
TUBGCP3-203ENST00000462580 HS6ST3Q8IZP7 471 aa10.94□□□□□ -0.66
TUBGCP3-203ENST00000462580 GABBR2O75899 941 aa10.93□□□□□ -0.66
TUBGCP3-203ENST00000462580 PSEN1P49768 467 aa10.93□□□□□ -0.66
TUBGCP3-203ENST00000462580 CLCN6P51797 869 aa10.91□□□□□ -0.66
TUBGCP3-203ENST00000462580 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
TUBGCP3-203ENST00000462580 PRDM2Q13029 1718 aa10.9□□□□□ -0.66
TUBGCP3-203ENST00000462580 STK25O00506 426 aa10.89□□□□□ -0.67
TUBGCP3-203ENST00000462580 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
TUBGCP3-203ENST00000462580 DNAJC5Q9H3Z4 198 aa10.89□□□□□ -0.67
TUBGCP3-203ENST00000462580 NESP48681 1621 aa10.88□□□□□ -0.67
TUBGCP3-203ENST00000462580 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
TUBGCP3-203ENST00000462580 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
TUBGCP3-203ENST00000462580 STK24Q9Y6E0 443 aa10.86□□□□□ -0.67
TUBGCP3-203ENST00000462580 NKX1-1Q15270 411 aaPredicted RBP10.85□□□□□ -0.67
TUBGCP3-203ENST00000462580 BMP2KQ9NSY1 1161 aaPredicted RBP10.85□□□□□ -0.67
TUBGCP3-203ENST00000462580 TIE1P35590 1138 aa10.84□□□□□ -0.67
TUBGCP3-203ENST00000462580 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
TUBGCP3-203ENST00000462580 TTLL13PA6NNM8 815 aa10.83□□□□□ -0.68
TUBGCP3-203ENST00000462580 KIF21AQ7Z4S6 1674 aa10.82□□□□□ -0.68
TUBGCP3-203ENST00000462580 CFTRP13569 1480 aa10.8□□□□□ -0.68
TUBGCP3-203ENST00000462580 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
TUBGCP3-203ENST00000462580 LAMC3Q9Y6N6 1575 aa10.79□□□□□ -0.68
TUBGCP3-203ENST00000462580 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
TUBGCP3-203ENST00000462580 ASTLQ6HA08 431 aaPredicted RBP10.78□□□□□ -0.68
TUBGCP3-203ENST00000462580 CABP2Q9NPB3 220 aa10.78□□□□□ -0.68
TUBGCP3-203ENST00000462580 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.68
TUBGCP3-203ENST00000462580 POTEIP0CG38 1075 aa10.77□□□□□ -0.69
TUBGCP3-203ENST00000462580 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
TUBGCP3-203ENST00000462580 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.69
TUBGCP3-203ENST00000462580 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
TUBGCP3-203ENST00000462580 TRIM35Q9UPQ4 493 aa10.74□□□□□ -0.69
TUBGCP3-203ENST00000462580 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
TUBGCP3-203ENST00000462580 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
TUBGCP3-203ENST00000462580 MFRPQ9BY79 579 aa10.73□□□□□ -0.69
TUBGCP3-203ENST00000462580 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
TUBGCP3-203ENST00000462580 FANCD2Q9BXW9 1451 aa10.71□□□□□ -0.69
TUBGCP3-203ENST00000462580 SYNJ1O43426 1573 aa10.7□□□□□ -0.7
TUBGCP3-203ENST00000462580 PAXIP1Q6ZW49 1069 aaPredicted RBP10.7□□□□□ -0.7
TUBGCP3-203ENST00000462580 DCBLD2Q96PD2 775 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms