RNA–Protein interactions for RNA: ENST00000454497.6

OTUD4-202, Transcript of OTU deubiquitinase 4, humanhuman

TSL 2 BASIC

Gene OTUD4, Length 7,069 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-202ENST00000454497 RRBP1Q9P2E9 1410 aaKnown RBP8.4□□□□□ -1.06
OTUD4-202ENST00000454497 ARHGAP35Q9NRY4 1499 aa8.4□□□□□ -1.06
OTUD4-202ENST00000454497 TDRD9Q8NDG6 1382 aaKnown RBP8.4□□□□□ -1.06
OTUD4-202ENST00000454497 PRDM2Q13029 1718 aa8.38□□□□□ -1.07
OTUD4-202ENST00000454497 ARAP1Q96P48 1450 aa8.38□□□□□ -1.07
OTUD4-202ENST00000454497 ERCC6Q03468 1493 aa8.37□□□□□ -1.07
OTUD4-202ENST00000454497 MIA2Q96PC5 1412 aa8.37□□□□□ -1.07
OTUD4-202ENST00000454497 NESP48681 1621 aa8.37□□□□□ -1.07
OTUD4-202ENST00000454497 NUP160Q12769 1436 aa8.37□□□□□ -1.07
OTUD4-202ENST00000454497 CCDC18Q5T9S5 1454 aa8.36□□□□□ -1.07
OTUD4-202ENST00000454497 CCNB3Q8WWL7 1395 aa8.36□□□□□ -1.07
OTUD4-202ENST00000454497 ABCA5Q8WWZ7 1642 aa8.36□□□□□ -1.07
OTUD4-202ENST00000454497 SYNJ2O15056 1496 aa8.35□□□□□ -1.07
OTUD4-202ENST00000454497 RAD54L2Q9Y4B4 1467 aa8.35□□□□□ -1.07
OTUD4-202ENST00000454497 RSPH4AQ5TD94 716 aa8.34□□□□□ -1.07
OTUD4-202ENST00000454497 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.07
OTUD4-202ENST00000454497 MTUS2Q5JR59 1369 aa8.33□□□□□ -1.08
OTUD4-202ENST00000454497 GRIN2AQ12879 1464 aa8.31□□□□□ -1.08
OTUD4-202ENST00000454497 CHMP7Q8WUX9 453 aaPredicted RBP8.3□□□□□ -1.08
OTUD4-202ENST00000454497 LRRC9Q6ZRR7 1453 aa8.29□□□□□ -1.08
OTUD4-202ENST00000454497 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
OTUD4-202ENST00000454497 ADAMTS12P58397 1594 aa8.27□□□□□ -1.08
OTUD4-202ENST00000454497 MYOM3Q5VTT5 1437 aa8.27□□□□□ -1.09
OTUD4-202ENST00000454497 TIAM1Q13009 1591 aa8.27□□□□□ -1.09
OTUD4-202ENST00000454497 IQGAP2Q13576 1575 aa8.26□□□□□ -1.09
OTUD4-202ENST00000454497 SAMD9Q5K651 1589 aa8.25□□□□□ -1.09
OTUD4-202ENST00000454497 TROQ12816 1431 aaPredicted RBP8.25□□□□□ -1.09
OTUD4-202ENST00000454497 EHBP1L1Q8N3D4 1523 aa8.25□□□□□ -1.09
OTUD4-202ENST00000454497 ROCK1Q13464 1354 aa8.24□□□□□ -1.09
OTUD4-202ENST00000454497 SNAPC4Q5SXM2 1469 aa8.24□□□□□ -1.09
OTUD4-202ENST00000454497 CCER1Q8TC90 406 aaPredicted RBP8.24□□□□□ -1.09
OTUD4-202ENST00000454497 DNAJC5BQ9UF47 199 aa8.24□□□□□ -1.09
OTUD4-202ENST00000454497 FGD6Q6ZV73 1430 aa8.24□□□□□ -1.09
OTUD4-202ENST00000454497 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
OTUD4-202ENST00000454497 FHOD3Q2V2M9 1422 aa8.23□□□□□ -1.09
OTUD4-202ENST00000454497 HFM1A2PYH4 1435 aa8.23□□□□□ -1.09
OTUD4-202ENST00000454497 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
OTUD4-202ENST00000454497 STAC3Q96MF2 364 aa8.21□□□□□ -1.09
OTUD4-202ENST00000454497 PLEKHH2Q8IVE3 1493 aa8.21□□□□□ -1.1
OTUD4-202ENST00000454497 PTPRGP23470 1445 aa8.2□□□□□ -1.1
OTUD4-202ENST00000454497 SETD5Q9C0A6 1442 aa8.2□□□□□ -1.1
OTUD4-202ENST00000454497 TCOF1Q13428 1488 aaKnown RBP8.2□□□□□ -1.1
OTUD4-202ENST00000454497 HECW1Q76N89 1606 aa8.19□□□□□ -1.1
OTUD4-202ENST00000454497 ARHGEF11O15085 1522 aa8.18□□□□□ -1.1
OTUD4-202ENST00000454497 EPRSP07814 1512 aaKnown RBP8.18□□□□□ -1.1
OTUD4-202ENST00000454497 ZNF608Q9ULD9 1512 aaPredicted RBP8.17□□□□□ -1.1
OTUD4-202ENST00000454497 KIF21AQ7Z4S6 1674 aa8.17□□□□□ -1.1
OTUD4-202ENST00000454497 UHRF1BP1LA0JNW5 1464 aa8.16□□□□□ -1.1
OTUD4-202ENST00000454497 NCOA2Q15596 1464 aa8.16□□□□□ -1.1
OTUD4-202ENST00000454497 PHLDB1Q86UU1 1377 aa8.16□□□□□ -1.1
OTUD4-202ENST00000454497 KANK4Q5T7N3 995 aaPredicted RBP8.16□□□□□ -1.1
OTUD4-202ENST00000454497 UACAQ9BZF9 1416 aa8.16□□□□□ -1.1
OTUD4-202ENST00000454497 DISP1Q96F81 1524 aa8.15□□□□□ -1.1
OTUD4-202ENST00000454497 KIAA1107Q9UPP5 1409 aa8.15□□□□□ -1.1
OTUD4-202ENST00000454497 ARAP3Q8WWN8 1544 aa8.14□□□□□ -1.11
OTUD4-202ENST00000454497 DHX57Q6P158 1386 aaKnown RBP8.14□□□□□ -1.11
OTUD4-202ENST00000454497 SHANK2Q9UPX8 1470 aa8.14□□□□□ -1.11
OTUD4-202ENST00000454497 TSPY4P0CV99 314 aa8.12□□□□□ -1.11
OTUD4-202ENST00000454497 TSPY10P0CW01 314 aa8.12□□□□□ -1.11
OTUD4-202ENST00000454497 ANKRD30AQ9BXX3 1397 aa8.12□□□□□ -1.11
OTUD4-202ENST00000454497 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
OTUD4-202ENST00000454497 EIF4G3O43432 1585 aaKnown RBP8.11□□□□□ -1.11
OTUD4-202ENST00000454497 CFDP1Q9UEE9 299 aaPredicted RBP8.11□□□□□ -1.11
OTUD4-202ENST00000454497 KIAA0556O60303 1618 aa8.11□□□□□ -1.11
OTUD4-202ENST00000454497 SLC24A1O60721 1099 aa8.1□□□□□ -1.11
OTUD4-202ENST00000454497 EFCAB2Q5VUJ9 269 aa8.1□□□□□ -1.11
OTUD4-202ENST00000454497 ADGRL2O95490 1459 aa8.1□□□□□ -1.11
OTUD4-202ENST00000454497 PRG4Q92954 1404 aaPredicted RBP8.1□□□□□ -1.11
OTUD4-202ENST00000454497 WDR7Q9Y4E6 1490 aa8.1□□□□□ -1.11
OTUD4-202ENST00000454497 HNRNPUL2Q1KMD3 747 aaKnown RBP8.09□□□□□ -1.11
OTUD4-202ENST00000454497 CFAP43Q8NDM7 1665 aa8.08□□□□□ -1.12
OTUD4-202ENST00000454497 PCF11O94913 1555 aaKnown RBP8.08□□□□□ -1.12
OTUD4-202ENST00000454497 RAB3GAP2Q9H2M9 1393 aa8.08□□□□□ -1.12
OTUD4-202ENST00000454497 EHMT2Q96KQ7 1210 aa8.08□□□□□ -1.12
OTUD4-202ENST00000454497 NAIPQ13075 1403 aa8.08□□□□□ -1.12
OTUD4-202ENST00000454497 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
OTUD4-202ENST00000454497 ZNF316A6NFI3 1004 aaPredicted RBP8.07□□□□□ -1.12
OTUD4-202ENST00000454497 ABCA8O94911 1581 aa8.05□□□□□ -1.12
OTUD4-202ENST00000454497 ARID4BQ4LE39 1312 aaPredicted RBP8.05□□□□□ -1.12
OTUD4-202ENST00000454497 ABCC2Q92887 1545 aa8.05□□□□□ -1.12
OTUD4-202ENST00000454497 NPM1P06748 294 aaKnown RBP eCLIP8.04□□□□□ -1.12
OTUD4-202ENST00000454497 OSCARQ8IYS5 282 aa8.04□□□□□ -1.12
OTUD4-202ENST00000454497 CTTNBP2Q8WZ74 1663 aa8.04□□□□□ -1.12
OTUD4-202ENST00000454497 RTEL1-TNFRSF6BF6WH68 1400 aa8.04□□□□□ -1.12
OTUD4-202ENST00000454497 FAM50AQ14320 339 aaKnown RBP8.04□□□□□ -1.12
OTUD4-202ENST00000454497 NCOA1Q15788 1441 aa8.04□□□□□ -1.12
OTUD4-202ENST00000454497 P3H3Q8IVL6 736 aa8.04□□□□□ -1.12
OTUD4-202ENST00000454497 FBLN2P98095 1184 aa8.03□□□□□ -1.12
OTUD4-202ENST00000454497 TONSLQ96HA7 1378 aa8.03□□□□□ -1.12
OTUD4-202ENST00000454497 GPATCH8Q9UKJ3 1502 aaKnown RBP8.03□□□□□ -1.12
OTUD4-202ENST00000454497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.02□□□□□ -1.12
OTUD4-202ENST00000454497 ABCC10Q5T3U5 1492 aa8.02□□□□□ -1.12
OTUD4-202ENST00000454497 SUPT6HQ7KZ85 1726 aaKnown RBP8.02□□□□□ -1.13
OTUD4-202ENST00000454497 PLB1Q6P1J6 1458 aa8.02□□□□□ -1.13
OTUD4-202ENST00000454497 ATP10BO94823 1461 aa8.02□□□□□ -1.13
OTUD4-202ENST00000454497 RANGAP1P46060 587 aaPredicted RBP8.02□□□□□ -1.13
OTUD4-202ENST00000454497 ATP1B4Q9UN42 357 aaPredicted RBP8.02□□□□□ -1.13
OTUD4-202ENST00000454497 PPP1R15AO75807 674 aaPredicted RBP8.01□□□□□ -1.13
OTUD4-202ENST00000454497 CENPBP07199 599 aaPredicted RBP8.01□□□□□ -1.13
OTUD4-202ENST00000454497 ANKRD50Q9ULJ7 1429 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms