RNA–Protein interactions for RNA: ENST00000453965.2

LINC01878-202, Transcript of long intergenic non-protein coding RNA 1878, humanhuman

TSL 3 BASIC

Gene LINC01878, Length 405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01878-202ENST00000453965 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
LINC01878-202ENST00000453965 HAX1O00165 279 aa12.24□□□□□ -0.45
LINC01878-202ENST00000453965 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
LINC01878-202ENST00000453965 CCDC61Q9Y6R9 512 aa12.22□□□□□ -0.45
LINC01878-202ENST00000453965 GSE1Q14687 1217 aa12.2□□□□□ -0.46
LINC01878-202ENST00000453965 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
LINC01878-202ENST00000453965 PYGBP11216 843 aa12.18□□□□□ -0.46
LINC01878-202ENST00000453965 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
LINC01878-202ENST00000453965 ECM2O94769 699 aaPredicted RBP12.16□□□□□ -0.46
LINC01878-202ENST00000453965 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
LINC01878-202ENST00000453965 RGL2O15211 777 aa12.12□□□□□ -0.47
LINC01878-202ENST00000453965 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
LINC01878-202ENST00000453965 MAP3K13O43283 966 aa12.08□□□□□ -0.48
LINC01878-202ENST00000453965 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
LINC01878-202ENST00000453965 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
LINC01878-202ENST00000453965 TRIM41Q8WV44 630 aa12.05□□□□□ -0.48
LINC01878-202ENST00000453965 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
LINC01878-202ENST00000453965 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
LINC01878-202ENST00000453965 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
LINC01878-202ENST00000453965 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
LINC01878-202ENST00000453965 GALR2O43603 387 aaPredicted RBP12□□□□□ -0.49
LINC01878-202ENST00000453965 TRPC6Q9Y210 931 aa12□□□□□ -0.49
LINC01878-202ENST00000453965 RIOK3O14730 519 aaKnown RBP11.97□□□□□ -0.49
LINC01878-202ENST00000453965 DCAF8L2P0C7V8 631 aa11.97□□□□□ -0.49
LINC01878-202ENST00000453965 GABBR2O75899 941 aa11.94□□□□□ -0.5
LINC01878-202ENST00000453965 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
LINC01878-202ENST00000453965 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
LINC01878-202ENST00000453965 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
LINC01878-202ENST00000453965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
LINC01878-202ENST00000453965 ZFP91Q96JP5 570 aaPredicted RBP11.89□□□□□ -0.51
LINC01878-202ENST00000453965 VGFO15240 615 aaPredicted RBP11.87□□□□□ -0.51
LINC01878-202ENST00000453965 LHX8Q68G74 356 aa11.87□□□□□ -0.51
LINC01878-202ENST00000453965 PSEN1P49768 467 aa11.86□□□□□ -0.51
LINC01878-202ENST00000453965 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
LINC01878-202ENST00000453965 CHGAP10645 457 aaKnown RBP11.83□□□□□ -0.52
LINC01878-202ENST00000453965 BMP2KQ9NSY1 1161 aaPredicted RBP11.83□□□□□ -0.52
LINC01878-202ENST00000453965 STK25O00506 426 aa11.81□□□□□ -0.52
LINC01878-202ENST00000453965 BCL11BQ9C0K0 894 aaPredicted RBP11.81□□□□□ -0.52
LINC01878-202ENST00000453965 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
LINC01878-202ENST00000453965 TTLL13PA6NNM8 815 aa11.79□□□□□ -0.52
LINC01878-202ENST00000453965 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
LINC01878-202ENST00000453965 STK24Q9Y6E0 443 aa11.78□□□□□ -0.52
LINC01878-202ENST00000453965 POTEIP0CG38 1075 aa11.77□□□□□ -0.53
LINC01878-202ENST00000453965 TIE1P35590 1138 aa11.77□□□□□ -0.53
LINC01878-202ENST00000453965 CLCN6P51797 869 aa11.77□□□□□ -0.53
LINC01878-202ENST00000453965 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
LINC01878-202ENST00000453965 ATMINO43313 823 aaPredicted RBP11.74□□□□□ -0.53
LINC01878-202ENST00000453965 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
LINC01878-202ENST00000453965 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
LINC01878-202ENST00000453965 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
LINC01878-202ENST00000453965 NKX1-1Q15270 411 aaPredicted RBP11.72□□□□□ -0.53
LINC01878-202ENST00000453965 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
LINC01878-202ENST00000453965 TRIM35Q9UPQ4 493 aa11.71□□□□□ -0.53
LINC01878-202ENST00000453965 DCBLD2Q96PD2 775 aa11.7□□□□□ -0.54
LINC01878-202ENST00000453965 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
LINC01878-202ENST00000453965 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
LINC01878-202ENST00000453965 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
LINC01878-202ENST00000453965 MFRPQ9BY79 579 aa11.61□□□□□ -0.55
LINC01878-202ENST00000453965 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
LINC01878-202ENST00000453965 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
LINC01878-202ENST00000453965 MKRN3Q13064 507 aaKnown RBP11.57□□□□□ -0.56
LINC01878-202ENST00000453965 MS4A4AQ96JQ5 239 aa11.57□□□□□ -0.56
LINC01878-202ENST00000453965 POTEFA5A3E0 1075 aa11.56□□□□□ -0.56
LINC01878-202ENST00000453965 FBXO22Q8NEZ5 403 aa11.56□□□□□ -0.56
LINC01878-202ENST00000453965 COLQQ9Y215 455 aaPredicted RBP11.56□□□□□ -0.56
LINC01878-202ENST00000453965 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
LINC01878-202ENST00000453965 IRX5P78411 483 aaPredicted RBP11.54□□□□□ -0.56
LINC01878-202ENST00000453965 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
LINC01878-202ENST00000453965 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
LINC01878-202ENST00000453965 PDCD7Q8N8D1 485 aaKnown RBP11.53□□□□□ -0.56
LINC01878-202ENST00000453965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC01878-202ENST00000453965 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
LINC01878-202ENST00000453965 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
LINC01878-202ENST00000453965 SOX12O15370 315 aa11.51□□□□□ -0.57
LINC01878-202ENST00000453965 IER5LQ5T953 404 aa11.51□□□□□ -0.57
LINC01878-202ENST00000453965 DPY19L2Q6NUT2 758 aa11.51□□□□□ -0.57
LINC01878-202ENST00000453965 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
LINC01878-202ENST00000453965 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
LINC01878-202ENST00000453965 PPP1R37O75864 691 aa11.5□□□□□ -0.57
LINC01878-202ENST00000453965 NLRP6P59044 892 aa11.48□□□□□ -0.57
LINC01878-202ENST00000453965 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
LINC01878-202ENST00000453965 C7P10643 843 aa11.47□□□□□ -0.57
LINC01878-202ENST00000453965 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
LINC01878-202ENST00000453965 PLCG2P16885 1265 aa11.45□□□□□ -0.58
LINC01878-202ENST00000453965 OCEL1Q9H607 264 aa11.45□□□□□ -0.58
LINC01878-202ENST00000453965 SEC24BO95487 1268 aa11.44□□□□□ -0.58
LINC01878-202ENST00000453965 POTEB2H3BUK9 544 aa11.42□□□□□ -0.58
LINC01878-202ENST00000453965 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
LINC01878-202ENST00000453965 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
LINC01878-202ENST00000453965 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
LINC01878-202ENST00000453965 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
LINC01878-202ENST00000453965 MICALL2Q8IY33 904 aa11.34□□□□□ -0.59
LINC01878-202ENST00000453965 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
LINC01878-202ENST00000453965 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
LINC01878-202ENST00000453965 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
LINC01878-202ENST00000453965 TMEM92Q6UXU6 159 aa11.25□□□□□ -0.61
LINC01878-202ENST00000453965 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
LINC01878-202ENST00000453965 POTEMA6NI47 508 aa11.22□□□□□ -0.61
LINC01878-202ENST00000453965 NCKAP5LQ9HCH0 1330 aa11.22□□□□□ -0.61
LINC01878-202ENST00000453965 G3V3G9 751 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms