RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 EIF4G2P78344 907 aaKnown RBP eCLIP16.07■□□□□ 0.16
SEC16A-207ENST00000453963 SALL2Q9Y467 1007 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-207ENST00000453963 NACADO15069 1562 aa16.07■□□□□ 0.16
SEC16A-207ENST00000453963 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
SEC16A-207ENST00000453963 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
SEC16A-207ENST00000453963 DDRGK1Q96HY6 314 aa16.02■□□□□ 0.16
SEC16A-207ENST00000453963 HIRIP3Q9BW71 556 aaPredicted RBP16.02■□□□□ 0.16
SEC16A-207ENST00000453963 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
SEC16A-207ENST00000453963 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
SEC16A-207ENST00000453963 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
SEC16A-207ENST00000453963 SUPT16HQ9Y5B9 1047 aaKnown RBP15.99■□□□□ 0.15
SEC16A-207ENST00000453963 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
SEC16A-207ENST00000453963 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
SEC16A-207ENST00000453963 KDM2AQ9Y2K7 1162 aa15.94■□□□□ 0.14
SEC16A-207ENST00000453963 PPP4R2Q9NY27 417 aa15.94■□□□□ 0.14
SEC16A-207ENST00000453963 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
SEC16A-207ENST00000453963 PPM1GO15355 546 aaPredicted RBP15.93■□□□□ 0.14
SEC16A-207ENST00000453963 BECN1Q14457 450 aa15.92■□□□□ 0.14
SEC16A-207ENST00000453963 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
SEC16A-207ENST00000453963 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
SEC16A-207ENST00000453963 ARXQ96QS3 562 aa15.88■□□□□ 0.13
SEC16A-207ENST00000453963 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
SEC16A-207ENST00000453963 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
SEC16A-207ENST00000453963 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
SEC16A-207ENST00000453963 CFDP1Q9UEE9 299 aaPredicted RBP15.83■□□□□ 0.12
SEC16A-207ENST00000453963 ERICH6BQ5W0A0 696 aa15.82■□□□□ 0.12
SEC16A-207ENST00000453963 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
SEC16A-207ENST00000453963 TRIM44Q96DX7 344 aaPredicted RBP15.81■□□□□ 0.12
SEC16A-207ENST00000453963 CCER2I3L3R5 266 aa15.8■□□□□ 0.12
SEC16A-207ENST00000453963 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
SEC16A-207ENST00000453963 ERCC6Q03468 1493 aa15.77■□□□□ 0.11
SEC16A-207ENST00000453963 RBM19Q9Y4C8 960 aaKnown RBP15.77■□□□□ 0.11
SEC16A-207ENST00000453963 GOLGA6L22H0YM25 854 aa15.77■□□□□ 0.11
SEC16A-207ENST00000453963 MYH16Q9H6N6 1097 aa15.76■□□□□ 0.11
SEC16A-207ENST00000453963 SIN3AQ96ST3 1273 aa15.76■□□□□ 0.11
SEC16A-207ENST00000453963 PPP1R15AO75807 674 aaPredicted RBP15.75■□□□□ 0.11
SEC16A-207ENST00000453963 RGL3Q3MIN7 710 aa15.75■□□□□ 0.11
SEC16A-207ENST00000453963 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
SEC16A-207ENST00000453963 B4GALNT3Q6L9W6 998 aa15.71■□□□□ 0.11
SEC16A-207ENST00000453963 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.11
SEC16A-207ENST00000453963 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
SEC16A-207ENST00000453963 CDCA8Q53HL2 280 aa15.7■□□□□ 0.1
SEC16A-207ENST00000453963 DEKP35659 375 aaKnown RBP15.68■□□□□ 0.1
SEC16A-207ENST00000453963 CARD11Q9BXL7 1154 aa15.68■□□□□ 0.1
SEC16A-207ENST00000453963 NCLP19338 710 aaKnown RBP15.67■□□□□ 0.1
SEC16A-207ENST00000453963 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
SEC16A-207ENST00000453963 CARMIL1Q5VZK9 1371 aa15.66■□□□□ 0.1
SEC16A-207ENST00000453963 ARID4BQ4LE39 1312 aaPredicted RBP15.66■□□□□ 0.1
SEC16A-207ENST00000453963 CUX2O14529 1486 aa15.64■□□□□ 0.09
SEC16A-207ENST00000453963 RTN4Q9NQC3 1192 aaKnown RBP15.64■□□□□ 0.09
SEC16A-207ENST00000453963 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
SEC16A-207ENST00000453963 CFAP53Q96M91 514 aa15.63■□□□□ 0.09
SEC16A-207ENST00000453963 FHAD1B1AJZ9 1412 aa15.63■□□□□ 0.09
SEC16A-207ENST00000453963 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
SEC16A-207ENST00000453963 C14orf37Q86TY3 774 aa15.63■□□□□ 0.09
SEC16A-207ENST00000453963 VPS8Q8N3P4 1428 aa15.61■□□□□ 0.09
SEC16A-207ENST00000453963 RGS3P49796 1198 aa15.61■□□□□ 0.09
SEC16A-207ENST00000453963 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
SEC16A-207ENST00000453963 NAP1L5Q96NT1 182 aaPredicted RBP15.6■□□□□ 0.09
SEC16A-207ENST00000453963 SETD5Q9C0A6 1442 aa15.59■□□□□ 0.09
SEC16A-207ENST00000453963 SOGA1O94964 1423 aa15.58■□□□□ 0.09
SEC16A-207ENST00000453963 FTSJ3Q8IY81 847 aaKnown RBP15.58■□□□□ 0.08
SEC16A-207ENST00000453963 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
SEC16A-207ENST00000453963 PTMAP06454 111 aaKnown RBP15.57■□□□□ 0.08
SEC16A-207ENST00000453963 ZBTB7CA1YPR0 619 aa15.56■□□□□ 0.08
SEC16A-207ENST00000453963 MROH2BQ7Z745 1585 aa15.55■□□□□ 0.08
SEC16A-207ENST00000453963 CDK11BP21127 795 aaKnown RBP15.54■□□□□ 0.08
SEC16A-207ENST00000453963 L1TD1Q5T7N2 865 aaKnown RBP15.54■□□□□ 0.08
SEC16A-207ENST00000453963 A0A0G2JS52 829 aa15.54■□□□□ 0.08
SEC16A-207ENST00000453963 CASC1Q6TDU7 716 aa15.54■□□□□ 0.08
SEC16A-207ENST00000453963 MS4A1P11836 297 aa15.54■□□□□ 0.08
SEC16A-207ENST00000453963 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
SEC16A-207ENST00000453963 EIF4G1Q04637 1599 aaKnown RBP15.52■□□□□ 0.07
SEC16A-207ENST00000453963 HSPA5P11021 654 aaKnown RBP15.52■□□□□ 0.07
SEC16A-207ENST00000453963 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
SEC16A-207ENST00000453963 DNTTIP2Q5QJE6 756 aaKnown RBP15.51■□□□□ 0.07
SEC16A-207ENST00000453963 CHMP4BQ9H444 224 aaKnown RBP15.51■□□□□ 0.07
SEC16A-207ENST00000453963 TCERG1O14776 1098 aaKnown RBP15.5■□□□□ 0.07
SEC16A-207ENST00000453963 POGKQ9P215 609 aa15.49■□□□□ 0.07
SEC16A-207ENST00000453963 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
SEC16A-207ENST00000453963 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
SEC16A-207ENST00000453963 NEUROD2Q15784 382 aa15.48■□□□□ 0.07
SEC16A-207ENST00000453963 NUDCQ9Y266 331 aa15.48■□□□□ 0.07
SEC16A-207ENST00000453963 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
SEC16A-207ENST00000453963 CC2D1BQ5T0F9 858 aaKnown RBP15.47■□□□□ 0.07
SEC16A-207ENST00000453963 TDRD9Q8NDG6 1382 aaKnown RBP15.47■□□□□ 0.07
SEC16A-207ENST00000453963 MAPK8IP3Q9UPT6 1336 aa15.47■□□□□ 0.07
SEC16A-207ENST00000453963 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.07
SEC16A-207ENST00000453963 TMF1P82094 1093 aa15.46■□□□□ 0.06
SEC16A-207ENST00000453963 RAB3GAP2Q9H2M9 1393 aa15.45■□□□□ 0.06
SEC16A-207ENST00000453963 HSCBQ8IWL3 235 aa15.45■□□□□ 0.06
SEC16A-207ENST00000453963 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
SEC16A-207ENST00000453963 CARMIL2Q6F5E8 1435 aa15.44■□□□□ 0.06
SEC16A-207ENST00000453963 IPO9Q96P70 1041 aaKnown RBP15.44■□□□□ 0.06
SEC16A-207ENST00000453963 KANK1Q14678 1352 aa15.43■□□□□ 0.06
SEC16A-207ENST00000453963 DCAF11Q8TEB1 546 aa15.43■□□□□ 0.06
SEC16A-207ENST00000453963 ZRSR1Q15695 479 aaKnown RBP15.42■□□□□ 0.06
SEC16A-207ENST00000453963 RCAN3Q9UKA8 241 aa15.42■□□□□ 0.06
SEC16A-207ENST00000453963 ARHGAP35Q9NRY4 1499 aa15.42■□□□□ 0.06
SEC16A-207ENST00000453963 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms