RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
SMARCA2-214ENST00000450198 ZRSR1Q15695 479 aaKnown RBP19.12■□□□□ 0.65
SMARCA2-214ENST00000450198 NCLP19338 710 aaKnown RBP19.12■□□□□ 0.65
SMARCA2-214ENST00000450198 ACIN1Q9UKV3 1341 aaKnown RBP19.1■□□□□ 0.65
SMARCA2-214ENST00000450198 CDCA8Q53HL2 280 aa19.09■□□□□ 0.65
SMARCA2-214ENST00000450198 FAM9BQ8IZU0 186 aa19.09■□□□□ 0.65
SMARCA2-214ENST00000450198 POGKQ9P215 609 aa19.06■□□□□ 0.64
SMARCA2-214ENST00000450198 EIF5BO60841 1220 aaKnown RBP19.05■□□□□ 0.64
SMARCA2-214ENST00000450198 TMX4Q9H1E5 349 aaPredicted RBP19.05■□□□□ 0.64
SMARCA2-214ENST00000450198 PPM1GO15355 546 aaPredicted RBP19.03■□□□□ 0.64
SMARCA2-214ENST00000450198 HNRNPUQ00839 825 aaKnown RBP eCLIP19.02■□□□□ 0.64
SMARCA2-214ENST00000450198 CASC1Q6TDU7 716 aa19.01■□□□□ 0.63
SMARCA2-214ENST00000450198 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
SMARCA2-214ENST00000450198 ERCC6Q03468 1493 aa19■□□□□ 0.63
SMARCA2-214ENST00000450198 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
SMARCA2-214ENST00000450198 MAPK8IP3Q9UPT6 1336 aa18.95■□□□□ 0.62
SMARCA2-214ENST00000450198 CCDC136Q96JN2 1154 aa18.94■□□□□ 0.62
SMARCA2-214ENST00000450198 CLSTN1O94985 981 aa18.91■□□□□ 0.62
SMARCA2-214ENST00000450198 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
SMARCA2-214ENST00000450198 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
SMARCA2-214ENST00000450198 OS9Q13438 667 aaPredicted RBP18.9■□□□□ 0.62
SMARCA2-214ENST00000450198 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
SMARCA2-214ENST00000450198 GOLGA6L22H0YM25 854 aa18.9■□□□□ 0.62
SMARCA2-214ENST00000450198 RGL3Q3MIN7 710 aa18.89■□□□□ 0.62
SMARCA2-214ENST00000450198 MRS2Q9HD23 443 aa18.89■□□□□ 0.61
SMARCA2-214ENST00000450198 ISY1Q9ULR0 285 aaKnown RBP18.89■□□□□ 0.61
SMARCA2-214ENST00000450198 KNSTRNQ9Y448 316 aa18.89■□□□□ 0.61
SMARCA2-214ENST00000450198 MLECQ14165 292 aa18.88■□□□□ 0.61
SMARCA2-214ENST00000450198 CHMP4BQ9H444 224 aaKnown RBP18.88■□□□□ 0.61
SMARCA2-214ENST00000450198 PNNQ9H307 717 aaKnown RBP18.87■□□□□ 0.61
SMARCA2-214ENST00000450198 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
SMARCA2-214ENST00000450198 FGD1P98174 961 aa18.87■□□□□ 0.61
SMARCA2-214ENST00000450198 CCDC9Q9Y3X0 531 aaKnown RBP18.86■□□□□ 0.61
SMARCA2-214ENST00000450198 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
SMARCA2-214ENST00000450198 BECN1Q14457 450 aa18.83■□□□□ 0.61
SMARCA2-214ENST00000450198 GTF3C3Q9Y5Q9 886 aa18.83■□□□□ 0.61
SMARCA2-214ENST00000450198 LAS1LQ9Y4W2 734 aaKnown RBP18.83■□□□□ 0.6
SMARCA2-214ENST00000450198 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
SMARCA2-214ENST00000450198 KANK1Q14678 1352 aa18.82■□□□□ 0.6
SMARCA2-214ENST00000450198 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
SMARCA2-214ENST00000450198 ANP32EQ9BTT0 268 aa18.79■□□□□ 0.6
SMARCA2-214ENST00000450198 CSB-PGBD3P0DP91 1061 aa18.78■□□□□ 0.6
SMARCA2-214ENST00000450198 FKBP8Q14318 412 aa18.77■□□□□ 0.6
SMARCA2-214ENST00000450198 KCNJ4P48050 445 aa18.77■□□□□ 0.6
SMARCA2-214ENST00000450198 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
SMARCA2-214ENST00000450198 TAOK2Q9UL54 1235 aa18.75■□□□□ 0.59
SMARCA2-214ENST00000450198 G3V3G9 751 aa18.74■□□□□ 0.59
SMARCA2-214ENST00000450198 DCAF8Q5TAQ9 597 aa18.74■□□□□ 0.59
SMARCA2-214ENST00000450198 GOLGA6L6A8MZA4 724 aa18.73■□□□□ 0.59
SMARCA2-214ENST00000450198 NAP1L2Q9ULW6 460 aaPredicted RBP18.73■□□□□ 0.59
SMARCA2-214ENST00000450198 GLIPR1L2Q4G1C9 344 aa18.72■□□□□ 0.59
SMARCA2-214ENST00000450198 MS4A1P11836 297 aa18.72■□□□□ 0.59
SMARCA2-214ENST00000450198 TRIM44Q96DX7 344 aaPredicted RBP18.7■□□□□ 0.58
SMARCA2-214ENST00000450198 NRDCO43847 1150 aa18.69■□□□□ 0.58
SMARCA2-214ENST00000450198 RTF1Q92541 710 aaKnown RBP18.68■□□□□ 0.58
SMARCA2-214ENST00000450198 PTMAP06454 111 aaKnown RBP18.67■□□□□ 0.58
SMARCA2-214ENST00000450198 KRI1Q8N9T8 703 aaKnown RBP18.67■□□□□ 0.58
SMARCA2-214ENST00000450198 U2SURPO15042 1029 aaKnown RBP18.67■□□□□ 0.58
SMARCA2-214ENST00000450198 CARD11Q9BXL7 1154 aa18.66■□□□□ 0.58
SMARCA2-214ENST00000450198 SOX12O15370 315 aa18.66■□□□□ 0.58
SMARCA2-214ENST00000450198 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
SMARCA2-214ENST00000450198 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
SMARCA2-214ENST00000450198 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
SMARCA2-214ENST00000450198 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
SMARCA2-214ENST00000450198 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.57
SMARCA2-214ENST00000450198 PRM3Q9NNZ6 103 aa18.63■□□□□ 0.57
SMARCA2-214ENST00000450198 L1TD1Q5T7N2 865 aaKnown RBP18.62■□□□□ 0.57
SMARCA2-214ENST00000450198 ZNF330Q9Y3S2 320 aaPredicted RBP18.62■□□□□ 0.57
SMARCA2-214ENST00000450198 EID1Q9Y6B2 187 aa18.6■□□□□ 0.57
SMARCA2-214ENST00000450198 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.56
SMARCA2-214ENST00000450198 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
SMARCA2-214ENST00000450198 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
SMARCA2-214ENST00000450198 TPRNQ4KMQ1 711 aa18.57■□□□□ 0.56
SMARCA2-214ENST00000450198 GNL2Q13823 731 aaKnown RBP18.56■□□□□ 0.56
SMARCA2-214ENST00000450198 GGT6Q6P531 493 aa18.56■□□□□ 0.56
SMARCA2-214ENST00000450198 CHAF1AQ13111 956 aaPredicted RBP18.54■□□□□ 0.56
SMARCA2-214ENST00000450198 MCCP23508 829 aa18.53■□□□□ 0.56
SMARCA2-214ENST00000450198 GTF2E1P29083 439 aaPredicted RBP18.53■□□□□ 0.56
SMARCA2-214ENST00000450198 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
SMARCA2-214ENST00000450198 KIAA2012Q0VF49 1180 aa18.52■□□□□ 0.56
SMARCA2-214ENST00000450198 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
SMARCA2-214ENST00000450198 CFAP44Q96MT7 982 aa18.51■□□□□ 0.55
SMARCA2-214ENST00000450198 CLIP1P30622 1438 aa18.51■□□□□ 0.55
SMARCA2-214ENST00000450198 DNTTIP2Q5QJE6 756 aaKnown RBP18.51■□□□□ 0.55
SMARCA2-214ENST00000450198 MEX3CQ5U5Q3 659 aaKnown RBP18.51■□□□□ 0.55
SMARCA2-214ENST00000450198 TMF1P82094 1093 aa18.5■□□□□ 0.55
SMARCA2-214ENST00000450198 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
SMARCA2-214ENST00000450198 HDAC5Q9UQL6 1122 aa18.49■□□□□ 0.55
SMARCA2-214ENST00000450198 GORABQ5T7V8 394 aa18.49■□□□□ 0.55
SMARCA2-214ENST00000450198 FRAT1Q92837 279 aaPredicted RBP18.48■□□□□ 0.55
SMARCA2-214ENST00000450198 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
SMARCA2-214ENST00000450198 MSH5O43196 834 aa18.46■□□□□ 0.55
SMARCA2-214ENST00000450198 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
SMARCA2-214ENST00000450198 PLCB2Q00722 1185 aa18.46■□□□□ 0.55
SMARCA2-214ENST00000450198 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.54
SMARCA2-214ENST00000450198 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
SMARCA2-214ENST00000450198 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMARCA2-214ENST00000450198 STK26Q9P289 416 aa18.45■□□□□ 0.54
SMARCA2-214ENST00000450198 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
SMARCA2-214ENST00000450198 KIAA1211Q6ZU35 1233 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms