RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 HS6ST3Q8IZP7 471 aa10.42□□□□□ -0.74
TM9SF3-202ENST00000443638 FXR2P51116 673 aaKnown RBP eCLIP10.4□□□□□ -0.742e-7■□□□□ 8.4
TM9SF3-202ENST00000443638 PLCD3Q8N3E9 789 aa10.39□□□□□ -0.75
TM9SF3-202ENST00000443638 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
TM9SF3-202ENST00000443638 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
TM9SF3-202ENST00000443638 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
TM9SF3-202ENST00000443638 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
TM9SF3-202ENST00000443638 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
TM9SF3-202ENST00000443638 HAX1O00165 279 aa10.32□□□□□ -0.76
TM9SF3-202ENST00000443638 MIER1Q8N108 512 aa10.31□□□□□ -0.76
TM9SF3-202ENST00000443638 CIZ1Q9ULV3 898 aaPredicted RBP10.31□□□□□ -0.76
TM9SF3-202ENST00000443638 SSUH2Q9Y2M2 353 aa10.31□□□□□ -0.76
TM9SF3-202ENST00000443638 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
TM9SF3-202ENST00000443638 RNF25Q96BH1 459 aaPredicted RBP10.28□□□□□ -0.76
TM9SF3-202ENST00000443638 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
TM9SF3-202ENST00000443638 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
TM9SF3-202ENST00000443638 HOMEZQ8IX15 550 aa10.24□□□□□ -0.77
TM9SF3-202ENST00000443638 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
TM9SF3-202ENST00000443638 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
TM9SF3-202ENST00000443638 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
TM9SF3-202ENST00000443638 C14orf37Q86TY3 774 aa10.18□□□□□ -0.78
TM9SF3-202ENST00000443638 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
TM9SF3-202ENST00000443638 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
TM9SF3-202ENST00000443638 EVX2Q03828 476 aa10.14□□□□□ -0.79
TM9SF3-202ENST00000443638 RIOK3O14730 519 aaKnown RBP10.13□□□□□ -0.79
TM9SF3-202ENST00000443638 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
TM9SF3-202ENST00000443638 GSE1Q14687 1217 aa10.12□□□□□ -0.79
TM9SF3-202ENST00000443638 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
TM9SF3-202ENST00000443638 NUBP1P53384 320 aa10.07□□□□□ -0.8
TM9SF3-202ENST00000443638 P3H3Q8IVL6 736 aa10.06□□□□□ -0.8
TM9SF3-202ENST00000443638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
TM9SF3-202ENST00000443638 VGFO15240 615 aaPredicted RBP10.04□□□□□ -0.8
TM9SF3-202ENST00000443638 BRPF1P55201 1214 aaPredicted RBP10.04□□□□□ -0.8
TM9SF3-202ENST00000443638 SGIP1Q9BQI5 828 aa10.04□□□□□ -0.8
TM9SF3-202ENST00000443638 STK25O00506 426 aa10.03□□□□□ -0.8
TM9SF3-202ENST00000443638 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.81
TM9SF3-202ENST00000443638 PRR29P0C7W0 189 aa10.01□□□□□ -0.81
TM9SF3-202ENST00000443638 RYDENQ9NUL5 291 aaKnown RBP10□□□□□ -0.81
TM9SF3-202ENST00000443638 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
TM9SF3-202ENST00000443638 KCNV2Q8TDN2 545 aa9.98□□□□□ -0.81
TM9SF3-202ENST00000443638 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
TM9SF3-202ENST00000443638 GABBR2O75899 941 aa9.94□□□□□ -0.82
TM9SF3-202ENST00000443638 DCAF8Q5TAQ9 597 aa9.94□□□□□ -0.82
TM9SF3-202ENST00000443638 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
TM9SF3-202ENST00000443638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
TM9SF3-202ENST00000443638 ZFP91Q96JP5 570 aaPredicted RBP9.92□□□□□ -0.82
TM9SF3-202ENST00000443638 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
TM9SF3-202ENST00000443638 STK24Q9Y6E0 443 aa9.91□□□□□ -0.82
TM9SF3-202ENST00000443638 SUPT5HO00267 1087 aaKnown RBP9.89□□□□□ -0.83
TM9SF3-202ENST00000443638 ZC3H15Q8WU90 426 aaKnown RBP9.87□□□□□ -0.83
TM9SF3-202ENST00000443638 FAM212AQ96EL1 285 aa9.87□□□□□ -0.83
TM9SF3-202ENST00000443638 FARP1Q9Y4F1 1045 aaPredicted RBP9.87□□□□□ -0.83
TM9SF3-202ENST00000443638 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
TM9SF3-202ENST00000443638 NEUROD2Q15784 382 aa9.84□□□□□ -0.83
TM9SF3-202ENST00000443638 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
TM9SF3-202ENST00000443638 CLCN6P51797 869 aa9.83□□□□□ -0.84
TM9SF3-202ENST00000443638 WDR70Q9NW82 654 aa9.83□□□□□ -0.84
TM9SF3-202ENST00000443638 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
TM9SF3-202ENST00000443638 ARHGEF1Q92888 912 aaKnown RBP9.8□□□□□ -0.84
TM9SF3-202ENST00000443638 LHX8Q68G74 356 aa9.79□□□□□ -0.84
TM9SF3-202ENST00000443638 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
TM9SF3-202ENST00000443638 PODXL2Q9NZ53 605 aa9.79□□□□□ -0.84
TM9SF3-202ENST00000443638 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
TM9SF3-202ENST00000443638 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.85
TM9SF3-202ENST00000443638 ZMYND10O75800 440 aa9.73□□□□□ -0.85
TM9SF3-202ENST00000443638 PYGBP11216 843 aa9.72□□□□□ -0.85
TM9SF3-202ENST00000443638 UBTFP17480 764 aaKnown RBP9.72□□□□□ -0.85
TM9SF3-202ENST00000443638 SEMA3EO15041 775 aa9.71□□□□□ -0.86
TM9SF3-202ENST00000443638 POTEIP0CG38 1075 aa9.71□□□□□ -0.86
TM9SF3-202ENST00000443638 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
TM9SF3-202ENST00000443638 E2F4Q16254 413 aa9.68□□□□□ -0.86
TM9SF3-202ENST00000443638 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
TM9SF3-202ENST00000443638 ZRANB1Q9UGI0 708 aa9.66□□□□□ -0.86
TM9SF3-202ENST00000443638 BARGINQ6ZT62 677 aa9.65□□□□□ -0.86
TM9SF3-202ENST00000443638 DCBLD2Q96PD2 775 aa9.65□□□□□ -0.86
TM9SF3-202ENST00000443638 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
TM9SF3-202ENST00000443638 RANGAP1P46060 587 aaPredicted RBP9.62□□□□□ -0.87
TM9SF3-202ENST00000443638 TRIM26Q12899 539 aaPredicted RBP9.62□□□□□ -0.87
TM9SF3-202ENST00000443638 ZNF467Q7Z7K2 595 aaPredicted RBP9.62□□□□□ -0.87
TM9SF3-202ENST00000443638 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
TM9SF3-202ENST00000443638 PDAP1Q13442 181 aaKnown RBP9.61□□□□□ -0.87
TM9SF3-202ENST00000443638 PPP1R37O75864 691 aa9.6□□□□□ -0.87
TM9SF3-202ENST00000443638 ARIH1Q9Y4X5 557 aaPredicted RBP9.6□□□□□ -0.87
TM9SF3-202ENST00000443638 PAK3O75914 559 aaPredicted RBP9.59□□□□□ -0.87
TM9SF3-202ENST00000443638 HRCP23327 699 aa9.58□□□□□ -0.88
TM9SF3-202ENST00000443638 SMYD5Q6GMV2 418 aa9.57□□□□□ -0.88
TM9SF3-202ENST00000443638 GPBP1L1Q9HC44 474 aaPredicted RBP9.57□□□□□ -0.88
TM9SF3-202ENST00000443638 FBXO22Q8NEZ5 403 aa9.56□□□□□ -0.88
TM9SF3-202ENST00000443638 AK7Q96M32 723 aa9.56□□□□□ -0.88
TM9SF3-202ENST00000443638 GALR2O43603 387 aaPredicted RBP9.55□□□□□ -0.88
TM9SF3-202ENST00000443638 NCKAP5LQ9HCH0 1330 aa9.54□□□□□ -0.88
TM9SF3-202ENST00000443638 MFSD10Q14728 455 aa9.53□□□□□ -0.88
TM9SF3-202ENST00000443638 C1orf115Q9H7X2 142 aa9.53□□□□□ -0.88
TM9SF3-202ENST00000443638 KDM4CQ9H3R0 1056 aa9.52□□□□□ -0.89
TM9SF3-202ENST00000443638 IL27Q8NEV9 243 aa9.51□□□□□ -0.89
TM9SF3-202ENST00000443638 PSEN1P49768 467 aa9.5□□□□□ -0.89
TM9SF3-202ENST00000443638 PCDHB8Q9UN66 801 aa9.5□□□□□ -0.89
TM9SF3-202ENST00000443638 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
TM9SF3-202ENST00000443638 PHF12Q96QT6 1004 aa9.49□□□□□ -0.89
TM9SF3-202ENST00000443638 NLRP6P59044 892 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms