RNA–Protein interactions for RNA: ENST00000441719.5

KDM3A-205, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 8,741 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-205ENST00000441719 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.38□□□□□ -0.11
KDM3A-205ENST00000441719 CCDC136Q96JN2 1154 aa14.36□□□□□ -0.11
KDM3A-205ENST00000441719 SENP3-EIF4A1A0A087X0R7 540 aa14.36□□□□□ -0.11
KDM3A-205ENST00000441719 CLIP1P30622 1438 aa14.35□□□□□ -0.11
KDM3A-205ENST00000441719 ANP32BQ92688 251 aaKnown RBP14.34□□□□□ -0.11
KDM3A-205ENST00000441719 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
KDM3A-205ENST00000441719 HAP1P54257 671 aaPredicted RBP14.33□□□□□ -0.12
KDM3A-205ENST00000441719 ARXQ96QS3 562 aa14.32□□□□□ -0.12
KDM3A-205ENST00000441719 DCAF1Q9Y4B6 1507 aa14.31□□□□□ -0.12
KDM3A-205ENST00000441719 EIF4G2P78344 907 aaKnown RBP eCLIP14.3□□□□□ -0.12
KDM3A-205ENST00000441719 PPM1GO15355 546 aaPredicted RBP14.29□□□□□ -0.12
KDM3A-205ENST00000441719 MYH16Q9H6N6 1097 aa14.28□□□□□ -0.12
KDM3A-205ENST00000441719 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.13
KDM3A-205ENST00000441719 CFDP1Q9UEE9 299 aaPredicted RBP14.26□□□□□ -0.13
KDM3A-205ENST00000441719 NBR1Q14596 966 aa14.26□□□□□ -0.13
KDM3A-205ENST00000441719 MIER1Q8N108 512 aa14.26□□□□□ -0.13
KDM3A-205ENST00000441719 CCDC180Q9P1Z9 1646 aa14.26□□□□□ -0.13
KDM3A-205ENST00000441719 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
KDM3A-205ENST00000441719 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
KDM3A-205ENST00000441719 LMOD2Q6P5Q4 547 aa14.23□□□□□ -0.13
KDM3A-205ENST00000441719 GOLGA3Q08378 1498 aa14.22□□□□□ -0.13
KDM3A-205ENST00000441719 LAS1LQ9Y4W2 734 aaKnown RBP14.21□□□□□ -0.14
KDM3A-205ENST00000441719 CEP162Q5TB80 1403 aa14.2□□□□□ -0.14
KDM3A-205ENST00000441719 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
KDM3A-205ENST00000441719 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
KDM3A-205ENST00000441719 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
KDM3A-205ENST00000441719 CARD11Q9BXL7 1154 aa14.18□□□□□ -0.14
KDM3A-205ENST00000441719 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
KDM3A-205ENST00000441719 CFAP53Q96M91 514 aa14.17□□□□□ -0.14
KDM3A-205ENST00000441719 POGKQ9P215 609 aa14.17□□□□□ -0.14
KDM3A-205ENST00000441719 TNNT2P45379 298 aaPredicted RBP14.17□□□□□ -0.14
KDM3A-205ENST00000441719 KNSTRNQ9Y448 316 aa14.17□□□□□ -0.14
KDM3A-205ENST00000441719 MLECQ14165 292 aa14.16□□□□□ -0.14
KDM3A-205ENST00000441719 KIF27Q86VH2 1401 aa14.14□□□□□ -0.15
KDM3A-205ENST00000441719 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
KDM3A-205ENST00000441719 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
KDM3A-205ENST00000441719 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
KDM3A-205ENST00000441719 TPRNQ4KMQ1 711 aa14.11□□□□□ -0.15
KDM3A-205ENST00000441719 CC2D1BQ5T0F9 858 aaKnown RBP14.11□□□□□ -0.15
KDM3A-205ENST00000441719 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
KDM3A-205ENST00000441719 EEA1Q15075 1411 aa14.08□□□□□ -0.16
KDM3A-205ENST00000441719 MAPK8IP3Q9UPT6 1336 aa14.08□□□□□ -0.16
KDM3A-205ENST00000441719 TULP1O00294 542 aaPredicted RBP14.08□□□□□ -0.16
KDM3A-205ENST00000441719 SOX12O15370 315 aa14.08□□□□□ -0.16
KDM3A-205ENST00000441719 FTSJ3Q8IY81 847 aaKnown RBP14.07□□□□□ -0.16
KDM3A-205ENST00000441719 TAOK2Q9UL54 1235 aa14.07□□□□□ -0.16
KDM3A-205ENST00000441719 NPHP1O15259 732 aa14.07□□□□□ -0.16
KDM3A-205ENST00000441719 NACADO15069 1562 aa14.06□□□□□ -0.16
KDM3A-205ENST00000441719 CDK11BP21127 795 aaKnown RBP14.06□□□□□ -0.16
KDM3A-205ENST00000441719 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
KDM3A-205ENST00000441719 SAFB2Q14151 953 aaKnown RBP eCLIP14.04□□□□□ -0.16
KDM3A-205ENST00000441719 CCNB3Q8WWL7 1395 aa14.04□□□□□ -0.16
KDM3A-205ENST00000441719 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
KDM3A-205ENST00000441719 NUDCQ9Y266 331 aa14.03□□□□□ -0.16
KDM3A-205ENST00000441719 NCLP19338 710 aaKnown RBP14.03□□□□□ -0.16
KDM3A-205ENST00000441719 FRAT1Q92837 279 aaPredicted RBP14.03□□□□□ -0.16
KDM3A-205ENST00000441719 SUPT16HQ9Y5B9 1047 aaKnown RBP14.03□□□□□ -0.16
KDM3A-205ENST00000441719 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.17
KDM3A-205ENST00000441719 BECN1Q14457 450 aa14.01□□□□□ -0.17
KDM3A-205ENST00000441719 TNIKQ9UKE5 1360 aa14.01□□□□□ -0.17
KDM3A-205ENST00000441719 CASC1Q6TDU7 716 aa13.99□□□□□ -0.17
KDM3A-205ENST00000441719 GGT6Q6P531 493 aa13.99□□□□□ -0.17
KDM3A-205ENST00000441719 SRPK2P78362 688 aaKnown RBP13.98□□□□□ -0.17
KDM3A-205ENST00000441719 DDRGK1Q96HY6 314 aa13.98□□□□□ -0.17
KDM3A-205ENST00000441719 STK26Q9P289 416 aa13.98□□□□□ -0.17
KDM3A-205ENST00000441719 KANK1Q14678 1352 aa13.98□□□□□ -0.17
KDM3A-205ENST00000441719 CUX2O14529 1486 aa13.98□□□□□ -0.17
KDM3A-205ENST00000441719 OS9Q13438 667 aaPredicted RBP13.97□□□□□ -0.17
KDM3A-205ENST00000441719 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
KDM3A-205ENST00000441719 TMF1P82094 1093 aa13.95□□□□□ -0.18
KDM3A-205ENST00000441719 RGS3P49796 1198 aa13.94□□□□□ -0.18
KDM3A-205ENST00000441719 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
KDM3A-205ENST00000441719 FOXD1Q16676 465 aa13.92□□□□□ -0.18
KDM3A-205ENST00000441719 GOLGA6L22H0YM25 854 aa13.92□□□□□ -0.18
KDM3A-205ENST00000441719 HDGFP51858 240 aaKnown RBP13.92□□□□□ -0.18
KDM3A-205ENST00000441719 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
KDM3A-205ENST00000441719 ZRSR1Q15695 479 aaKnown RBP13.9□□□□□ -0.18
KDM3A-205ENST00000441719 SOGA1O94964 1423 aa13.9□□□□□ -0.18
KDM3A-205ENST00000441719 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
KDM3A-205ENST00000441719 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
KDM3A-205ENST00000441719 MORC1Q86VD1 984 aa13.89□□□□□ -0.19
KDM3A-205ENST00000441719 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
KDM3A-205ENST00000441719 PNNQ9H307 717 aaKnown RBP13.89□□□□□ -0.19
KDM3A-205ENST00000441719 FHAD1B1AJZ9 1412 aa13.88□□□□□ -0.19
KDM3A-205ENST00000441719 TRIM44Q96DX7 344 aaPredicted RBP13.88□□□□□ -0.19
KDM3A-205ENST00000441719 KCNJ4P48050 445 aa13.86□□□□□ -0.19
KDM3A-205ENST00000441719 FGD1P98174 961 aa13.86□□□□□ -0.19
KDM3A-205ENST00000441719 PTMAP06454 111 aaKnown RBP13.86□□□□□ -0.19
KDM3A-205ENST00000441719 PKD2Q13563 968 aa13.86□□□□□ -0.19
KDM3A-205ENST00000441719 RTF1Q92541 710 aaKnown RBP13.83□□□□□ -0.2
KDM3A-205ENST00000441719 HSPA5P11021 654 aaKnown RBP13.83□□□□□ -0.2
KDM3A-205ENST00000441719 HSP90AB1P08238 724 aaKnown RBP13.83□□□□□ -0.2
KDM3A-205ENST00000441719 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
KDM3A-205ENST00000441719 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
KDM3A-205ENST00000441719 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
KDM3A-205ENST00000441719 CSB-PGBD3P0DP91 1061 aa13.82□□□□□ -0.2
KDM3A-205ENST00000441719 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
KDM3A-205ENST00000441719 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
KDM3A-205ENST00000441719 PPP4R2Q9NY27 417 aa13.81□□□□□ -0.2
KDM3A-205ENST00000441719 ZNF330Q9Y3S2 320 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms