RNA–Protein interactions for RNA: ENST00000440028.2

MSL3P1-202, Transcript of MSL complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene MSL3P1, Length 1,468 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1-202ENST00000440028 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
MSL3P1-202ENST00000440028 SHROOM4Q9ULL8 1493 aa9.31□□□□□ -0.92
MSL3P1-202ENST00000440028 REM2Q8IYK8 340 aaPredicted RBP9.3□□□□□ -0.92
MSL3P1-202ENST00000440028 BICRAQ9NZM4 1560 aa9.28□□□□□ -0.92
MSL3P1-202ENST00000440028 FKBP8Q14318 412 aa9.27□□□□□ -0.93
MSL3P1-202ENST00000440028 UNC13AQ9UPW8 1703 aa9.26□□□□□ -0.93
MSL3P1-202ENST00000440028 SCRIBQ14160 1630 aa9.25□□□□□ -0.93
MSL3P1-202ENST00000440028 POLA2Q14181 598 aa9.25□□□□□ -0.93
MSL3P1-202ENST00000440028 PITPNM1O00562 1244 aa9.2□□□□□ -0.94
MSL3P1-202ENST00000440028 CLSPNQ9HAW4 1339 aa9.18□□□□□ -0.94
MSL3P1-202ENST00000440028 CECR2Q9BXF3 1484 aa9.15□□□□□ -0.95
MSL3P1-202ENST00000440028 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
MSL3P1-202ENST00000440028 NEUROD1Q13562 356 aa9.13□□□□□ -0.95
MSL3P1-202ENST00000440028 CC2D2AQ9P2K1 1620 aa9.12□□□□□ -0.95
MSL3P1-202ENST00000440028 GABBR2O75899 941 aa9.11□□□□□ -0.95
MSL3P1-202ENST00000440028 FOXD4L1Q9NU39 408 aa9.1□□□□□ -0.95
MSL3P1-202ENST00000440028 C19orf67A6NJJ6 358 aa9.06□□□□□ -0.96
MSL3P1-202ENST00000440028 ZBTB12Q9Y330 459 aaPredicted RBP9.06□□□□□ -0.96
MSL3P1-202ENST00000440028 DIEXFQ68CQ4 756 aaKnown RBP9.04□□□□□ -0.96
MSL3P1-202ENST00000440028 EIF4G1Q04637 1599 aaKnown RBP9.04□□□□□ -0.96
MSL3P1-202ENST00000440028 LOC105371045A0A1W2PR82 267 aa9.03□□□□□ -0.96
MSL3P1-202ENST00000440028 NBR1Q14596 966 aa9.01□□□□□ -0.97
MSL3P1-202ENST00000440028 MYCNP04198 464 aaPredicted RBP9□□□□□ -0.97
MSL3P1-202ENST00000440028 CUX2O14529 1486 aa9□□□□□ -0.97
MSL3P1-202ENST00000440028 HMGB1P09429 215 aaKnown RBP8.99□□□□□ -0.97
MSL3P1-202ENST00000440028 FBLN2P98095 1184 aa8.98□□□□□ -0.97
MSL3P1-202ENST00000440028 OSCARQ8IYS5 282 aa8.98□□□□□ -0.97
MSL3P1-202ENST00000440028 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.98□□□□□ -0.97
MSL3P1-202ENST00000440028 CDK11AQ9UQ88 783 aaPredicted RBP8.96□□□□□ -0.97
MSL3P1-202ENST00000440028 CCER1Q8TC90 406 aaPredicted RBP8.95□□□□□ -0.98
MSL3P1-202ENST00000440028 TRIM41Q8WV44 630 aa8.95□□□□□ -0.98
MSL3P1-202ENST00000440028 PRKAR2AP13861 404 aaKnown RBP8.94□□□□□ -0.98
MSL3P1-202ENST00000440028 ANP32EQ9BTT0 268 aa8.93□□□□□ -0.98
MSL3P1-202ENST00000440028 POTEIP0CG38 1075 aa8.91□□□□□ -0.98
MSL3P1-202ENST00000440028 UBTFP17480 764 aaKnown RBP8.91□□□□□ -0.98
MSL3P1-202ENST00000440028 BCL11AQ9H165 835 aa8.91□□□□□ -0.98
MSL3P1-202ENST00000440028 RSF1Q96T23 1441 aaPredicted RBP8.91□□□□□ -0.98
MSL3P1-202ENST00000440028 ZNF316A6NFI3 1004 aaPredicted RBP8.9□□□□□ -0.98
MSL3P1-202ENST00000440028 BBXQ8WY36 941 aaPredicted RBP8.89□□□□□ -0.99
MSL3P1-202ENST00000440028 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
MSL3P1-202ENST00000440028 WRNQ14191 1432 aaPredicted RBP eCLIP8.86□□□□□ -0.99
MSL3P1-202ENST00000440028 POTEMA6NI47 508 aa8.85□□□□□ -0.99
MSL3P1-202ENST00000440028 BAZ1AQ9NRL2 1556 aaPredicted RBP8.84□□□□□ -0.99
MSL3P1-202ENST00000440028 PCDH10Q9P2E7 1040 aa8.83□□□□□ -1
MSL3P1-202ENST00000440028 CDK11BP21127 795 aaKnown RBP8.83□□□□□ -1
MSL3P1-202ENST00000440028 ATAD2BQ9ULI0 1458 aa8.82□□□□□ -1
MSL3P1-202ENST00000440028 NCAPD3P42695 1498 aa8.82□□□□□ -1
MSL3P1-202ENST00000440028 PAXIP1Q6ZW49 1069 aaPredicted RBP8.81□□□□□ -1
MSL3P1-202ENST00000440028 MYT1LQ9UL68 1186 aa8.81□□□□□ -1
MSL3P1-202ENST00000440028 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
MSL3P1-202ENST00000440028 SMARCA4P51532 1647 aa8.8□□□□□ -1
MSL3P1-202ENST00000440028 MROH2BQ7Z745 1585 aa8.8□□□□□ -1
MSL3P1-202ENST00000440028 ATXN8OSP0DMR3 200 aa8.79□□□□□ -1
MSL3P1-202ENST00000440028 POTEGQ6S5H5 508 aa8.79□□□□□ -1
MSL3P1-202ENST00000440028 ERCC6Q03468 1493 aa8.79□□□□□ -1
MSL3P1-202ENST00000440028 ATF5Q9Y2D1 282 aaPredicted RBP8.78□□□□□ -1
MSL3P1-202ENST00000440028 CLCN6P51797 869 aa8.77□□□□□ -1.01
MSL3P1-202ENST00000440028 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
MSL3P1-202ENST00000440028 CFAP44Q96MT7 982 aa8.75□□□□□ -1.01
MSL3P1-202ENST00000440028 SMARCA2P51531 1590 aa8.75□□□□□ -1.01
MSL3P1-202ENST00000440028 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
MSL3P1-202ENST00000440028 WIZO95785 1651 aa8.74□□□□□ -1.01
MSL3P1-202ENST00000440028 BAZ1BQ9UIG0 1483 aaKnown RBP8.73□□□□□ -1.01
MSL3P1-202ENST00000440028 FAM9AQ8IZU1 332 aaPredicted RBP8.73□□□□□ -1.01
MSL3P1-202ENST00000440028 OTUD5Q96G74 571 aa8.73□□□□□ -1.01
MSL3P1-202ENST00000440028 PLEKHG5O94827 1062 aa8.72□□□□□ -1.01
MSL3P1-202ENST00000440028 SUPT16HQ9Y5B9 1047 aaKnown RBP8.72□□□□□ -1.01
MSL3P1-202ENST00000440028 TOP2AP11388 1531 aaKnown RBP8.71□□□□□ -1.02
MSL3P1-202ENST00000440028 PEG3Q9GZU2 1588 aa8.7□□□□□ -1.02
MSL3P1-202ENST00000440028 TSHZ2Q9NRE2 1034 aa8.7□□□□□ -1.02
MSL3P1-202ENST00000440028 CLEC11AQ9Y240 323 aa8.7□□□□□ -1.02
MSL3P1-202ENST00000440028 SPDYE2BA6NHP3 402 aa8.7□□□□□ -1.02
MSL3P1-202ENST00000440028 SPDYE6P0CI01 402 aa8.7□□□□□ -1.02
MSL3P1-202ENST00000440028 SPDYE2Q495Y8 402 aa8.7□□□□□ -1.02
MSL3P1-202ENST00000440028 NESP48681 1621 aa8.69□□□□□ -1.02
MSL3P1-202ENST00000440028 HMGXB3Q12766 1538 aa8.69□□□□□ -1.02
MSL3P1-202ENST00000440028 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
MSL3P1-202ENST00000440028 MIER1Q8N108 512 aa8.69□□□□□ -1.02
MSL3P1-202ENST00000440028 SPRYD3Q8NCJ5 442 aa8.69□□□□□ -1.02
MSL3P1-202ENST00000440028 YTHDC1Q96MU7 727 aaKnown RBP8.69□□□□□ -1.02
MSL3P1-202ENST00000440028 EEA1Q15075 1411 aa8.69□□□□□ -1.02
MSL3P1-202ENST00000440028 PUS7Q96PZ0 661 aaKnown RBP8.67□□□□□ -1.02
MSL3P1-202ENST00000440028 DCBLD2Q96PD2 775 aa8.66□□□□□ -1.02
MSL3P1-202ENST00000440028 PKD2Q13563 968 aa8.64□□□□□ -1.03
MSL3P1-202ENST00000440028 CHMP4AQ9BY43 222 aa8.64□□□□□ -1.03
MSL3P1-202ENST00000440028 TNIKQ9UKE5 1360 aa8.63□□□□□ -1.03
MSL3P1-202ENST00000440028 CHADLQ6NUI6 762 aa8.63□□□□□ -1.03
MSL3P1-202ENST00000440028 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
MSL3P1-202ENST00000440028 UBE2Q2Q8WVN8 375 aa8.62□□□□□ -1.03
MSL3P1-202ENST00000440028 CD44P16070 742 aaKnown RBP8.61□□□□□ -1.03
MSL3P1-202ENST00000440028 RSPH6AQ9H0K4 717 aa8.61□□□□□ -1.03
MSL3P1-202ENST00000440028 CEP162Q5TB80 1403 aa8.61□□□□□ -1.03
MSL3P1-202ENST00000440028 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
MSL3P1-202ENST00000440028 THOC2Q8NI27 1593 aaKnown RBP8.59□□□□□ -1.03
MSL3P1-202ENST00000440028 POTEB2H3BUK9 544 aa8.58□□□□□ -1.04
MSL3P1-202ENST00000440028 ERICH6BQ5W0A0 696 aa8.57□□□□□ -1.04
MSL3P1-202ENST00000440028 FANCIQ9NVI1 1328 aa8.57□□□□□ -1.04
MSL3P1-202ENST00000440028 IGSF3O75054 1194 aa8.57□□□□□ -1.04
MSL3P1-202ENST00000440028 NEFLP07196 543 aa8.57□□□□□ -1.04
MSL3P1-202ENST00000440028 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms