RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CCDC88BA6NC98 1476 aa6.67□□□□□ -1.34
HMGB1P37-201ENST00000439613 CC2D2AQ9P2K1 1620 aa6.65□□□□□ -1.34
HMGB1P37-201ENST00000439613 PLCD3Q8N3E9 789 aa6.65□□□□□ -1.34
HMGB1P37-201ENST00000439613 RTN4Q9NQC3 1192 aaKnown RBP6.65□□□□□ -1.34
HMGB1P37-201ENST00000439613 PLEKHG5O94827 1062 aa6.63□□□□□ -1.35
HMGB1P37-201ENST00000439613 CHRDL2Q6WN34 429 aa6.62□□□□□ -1.35
HMGB1P37-201ENST00000439613 IFNLR1Q8IU57 520 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P37-201ENST00000439613 KLHL34Q8N239 644 aa6.6□□□□□ -1.35
HMGB1P37-201ENST00000439613 CREBZFQ9NS37 354 aa6.6□□□□□ -1.35
HMGB1P37-201ENST00000439613 FXR2P51116 673 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGB1P37-201ENST00000439613 TRIM41Q8WV44 630 aa6.59□□□□□ -1.35
HMGB1P37-201ENST00000439613 AMER1Q5JTC6 1135 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P37-201ENST00000439613 ZBTB47Q9UFB7 747 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P37-201ENST00000439613 CHADLQ6NUI6 762 aa6.56□□□□□ -1.36
HMGB1P37-201ENST00000439613 PRKAR2AP13861 404 aaKnown RBP6.55□□□□□ -1.36
HMGB1P37-201ENST00000439613 PIP4P2Q8N4L2 257 aa6.55□□□□□ -1.36
HMGB1P37-201ENST00000439613 PRDM2Q13029 1718 aa6.55□□□□□ -1.36
HMGB1P37-201ENST00000439613 CFTRP13569 1480 aa6.54□□□□□ -1.36
HMGB1P37-201ENST00000439613 SPOCK2Q92563 424 aa6.54□□□□□ -1.36
HMGB1P37-201ENST00000439613 MNX1P50219 401 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P37-201ENST00000439613 CADPSQ9ULU8 1353 aa6.53□□□□□ -1.36
HMGB1P37-201ENST00000439613 NPM1P06748 294 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMGB1P37-201ENST00000439613 FARP1Q9Y4F1 1045 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P37-201ENST00000439613 WRNQ14191 1432 aaPredicted RBP eCLIP6.5□□□□□ -1.37
HMGB1P37-201ENST00000439613 ABCC8Q09428 1581 aa6.5□□□□□ -1.37
HMGB1P37-201ENST00000439613 LAMC3Q9Y6N6 1575 aa6.48□□□□□ -1.37
HMGB1P37-201ENST00000439613 NUBP1P53384 320 aa6.47□□□□□ -1.37
HMGB1P37-201ENST00000439613 TOP2BQ02880 1626 aa6.47□□□□□ -1.37
HMGB1P37-201ENST00000439613 BIVM-ERCC5R4GMW8 1640 aa6.46□□□□□ -1.38
HMGB1P37-201ENST00000439613 SYNJ1O43426 1573 aa6.45□□□□□ -1.38
HMGB1P37-201ENST00000439613 EEA1Q15075 1411 aa6.45□□□□□ -1.38
HMGB1P37-201ENST00000439613 PDS5BQ9NTI5 1447 aa6.44□□□□□ -1.38
HMGB1P37-201ENST00000439613 DCAF8Q5TAQ9 597 aa6.44□□□□□ -1.38
HMGB1P37-201ENST00000439613 CIZ1Q9ULV3 898 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P37-201ENST00000439613 FANCD2Q9BXW9 1451 aa6.44□□□□□ -1.38
HMGB1P37-201ENST00000439613 PKD2Q13563 968 aa6.43□□□□□ -1.38
HMGB1P37-201ENST00000439613 GSE1Q14687 1217 aa6.43□□□□□ -1.38
HMGB1P37-201ENST00000439613 RASEFQ8IZ41 740 aa6.43□□□□□ -1.38
HMGB1P37-201ENST00000439613 CUX1P39880 1505 aa6.42□□□□□ -1.38
HMGB1P37-201ENST00000439613 FAM212AQ96EL1 285 aa6.42□□□□□ -1.38
HMGB1P37-201ENST00000439613 NESP48681 1621 aa6.42□□□□□ -1.38
HMGB1P37-201ENST00000439613 FAM9AQ8IZU1 332 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P37-201ENST00000439613 CEP164Q9UPV0 1460 aa6.41□□□□□ -1.38
HMGB1P37-201ENST00000439613 DNMBPQ6XZF7 1577 aa6.4□□□□□ -1.39
HMGB1P37-201ENST00000439613 TSPYL2Q9H2G4 693 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P37-201ENST00000439613 SOGA1O94964 1423 aa6.39□□□□□ -1.39
HMGB1P37-201ENST00000439613 LOC105371045A0A1W2PR82 267 aa6.38□□□□□ -1.39
HMGB1P37-201ENST00000439613 PAK3O75914 559 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P37-201ENST00000439613 ECM2O94769 699 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P37-201ENST00000439613 KIF21AQ7Z4S6 1674 aa6.37□□□□□ -1.39
HMGB1P37-201ENST00000439613 TOPBP1Q92547 1522 aa6.37□□□□□ -1.39
HMGB1P37-201ENST00000439613 POTEHQ6S545 545 aa6.37□□□□□ -1.39
HMGB1P37-201ENST00000439613 KIF27Q86VH2 1401 aa6.36□□□□□ -1.39
HMGB1P37-201ENST00000439613 C19orf67A6NJJ6 358 aa6.36□□□□□ -1.39
HMGB1P37-201ENST00000439613 CD44P16070 742 aaKnown RBP6.36□□□□□ -1.39
HMGB1P37-201ENST00000439613 FGD5Q6ZNL6 1462 aa6.35□□□□□ -1.39
HMGB1P37-201ENST00000439613 HAX1O00165 279 aa6.35□□□□□ -1.39
HMGB1P37-201ENST00000439613 RUSC2Q8N2Y8 1516 aa6.35□□□□□ -1.39
HMGB1P37-201ENST00000439613 RGL2O15211 777 aa6.34□□□□□ -1.39
HMGB1P37-201ENST00000439613 CHRM1P11229 460 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P37-201ENST00000439613 ZRANB1Q9UGI0 708 aa6.34□□□□□ -1.39
HMGB1P37-201ENST00000439613 CCDC61Q9Y6R9 512 aa6.34□□□□□ -1.39
HMGB1P37-201ENST00000439613 KIF21BO75037 1637 aa6.34□□□□□ -1.39
HMGB1P37-201ENST00000439613 URB2Q14146 1524 aaKnown RBP6.34□□□□□ -1.39
HMGB1P37-201ENST00000439613 GOLGA3Q08378 1498 aa6.34□□□□□ -1.4
HMGB1P37-201ENST00000439613 MRC2Q9UBG0 1479 aa6.34□□□□□ -1.4
HMGB1P37-201ENST00000439613 PYGBP11216 843 aa6.33□□□□□ -1.4
HMGB1P37-201ENST00000439613 POLA1P09884 1462 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P37-201ENST00000439613 ABCA10Q8WWZ4 1543 aa6.32□□□□□ -1.4
HMGB1P37-201ENST00000439613 CUX2O14529 1486 aa6.32□□□□□ -1.4
HMGB1P37-201ENST00000439613 ERCC6Q03468 1493 aa6.32□□□□□ -1.4
HMGB1P37-201ENST00000439613 TNIKQ9UKE5 1360 aa6.31□□□□□ -1.4
HMGB1P37-201ENST00000439613 UBTFP17480 764 aaKnown RBP6.31□□□□□ -1.4
HMGB1P37-201ENST00000439613 ERICH3Q5RHP9 1530 aa6.3□□□□□ -1.4
HMGB1P37-201ENST00000439613 WDR62O43379 1518 aa6.3□□□□□ -1.4
HMGB1P37-201ENST00000439613 PRXQ9BXM0 1461 aa6.29□□□□□ -1.4
HMGB1P37-201ENST00000439613 IGF1RP08069 1367 aa6.29□□□□□ -1.4
HMGB1P37-201ENST00000439613 WDR97A6NE52 1622 aa6.28□□□□□ -1.4
HMGB1P37-201ENST00000439613 RAD54L2Q9Y4B4 1467 aa6.28□□□□□ -1.4
HMGB1P37-201ENST00000439613 EVX2Q03828 476 aa6.28□□□□□ -1.4
HMGB1P37-201ENST00000439613 RNF25Q96BH1 459 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P37-201ENST00000439613 KIF12Q96FN5 646 aa6.28□□□□□ -1.4
HMGB1P37-201ENST00000439613 TARBP1Q13395 1621 aaKnown RBP6.28□□□□□ -1.4
HMGB1P37-201ENST00000439613 CUL7Q14999 1698 aa6.27□□□□□ -1.41
HMGB1P37-201ENST00000439613 ZNF579Q8NAF0 562 aaKnown RBP6.27□□□□□ -1.41
HMGB1P37-201ENST00000439613 PHF12Q96QT6 1004 aa6.27□□□□□ -1.41
HMGB1P37-201ENST00000439613 IFT140Q96RY7 1462 aa6.27□□□□□ -1.41
HMGB1P37-201ENST00000439613 THOC2Q8NI27 1593 aaKnown RBP6.27□□□□□ -1.41
HMGB1P37-201ENST00000439613 ABCA5Q8WWZ7 1642 aa6.26□□□□□ -1.41
HMGB1P37-201ENST00000439613 RIOK3O14730 519 aaKnown RBP6.26□□□□□ -1.41
HMGB1P37-201ENST00000439613 MAP3K13O43283 966 aa6.26□□□□□ -1.41
HMGB1P37-201ENST00000439613 SGIP1Q9BQI5 828 aa6.26□□□□□ -1.41
HMGB1P37-201ENST00000439613 CARMIL1Q5VZK9 1371 aa6.26□□□□□ -1.41
HMGB1P37-201ENST00000439613 GAPVD1Q14C86 1478 aa6.26□□□□□ -1.41
HMGB1P37-201ENST00000439613 RAPGEF2Q9Y4G8 1499 aa6.26□□□□□ -1.41
HMGB1P37-201ENST00000439613 CEP162Q5TB80 1403 aa6.25□□□□□ -1.41
HMGB1P37-201ENST00000439613 ZNF467Q7Z7K2 595 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P37-201ENST00000439613 TAOK2Q9UL54 1235 aa6.25□□□□□ -1.41
HMGB1P37-201ENST00000439613 PCDHB13Q9Y5F0 798 aa6.25□□□□□ -1.41
HMGB1P37-201ENST00000439613 TDRD9Q8NDG6 1382 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms