RNA–Protein interactions for RNA: ENST00000438723.1

RALGPS1-209, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 5

Gene RALGPS1, Length 4,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-209ENST00000438723 USP35Q9P2H5 1018 aa13.39□□□□□ -0.27
RALGPS1-209ENST00000438723 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
RALGPS1-209ENST00000438723 TIMELESSQ9UNS1 1208 aa13.39□□□□□ -0.27
RALGPS1-209ENST00000438723 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
RALGPS1-209ENST00000438723 CEP162Q5TB80 1403 aa13.37□□□□□ -0.27
RALGPS1-209ENST00000438723 CLIP1P30622 1438 aa13.36□□□□□ -0.27
RALGPS1-209ENST00000438723 PTMAP06454 111 aaKnown RBP13.34□□□□□ -0.27
RALGPS1-209ENST00000438723 GOLGA3Q08378 1498 aa13.33□□□□□ -0.28
RALGPS1-209ENST00000438723 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.28
RALGPS1-209ENST00000438723 FANCIQ9NVI1 1328 aa13.33□□□□□ -0.28
RALGPS1-209ENST00000438723 PNNQ9H307 717 aaKnown RBP13.33□□□□□ -0.28
RALGPS1-209ENST00000438723 DNTTIP2Q5QJE6 756 aaKnown RBP13.32□□□□□ -0.28
RALGPS1-209ENST00000438723 IPO9Q96P70 1041 aaKnown RBP13.31□□□□□ -0.28
RALGPS1-209ENST00000438723 PTMSP20962 102 aa13.3□□□□□ -0.28
RALGPS1-209ENST00000438723 SALL2Q9Y467 1007 aaPredicted RBP13.3□□□□□ -0.28
RALGPS1-209ENST00000438723 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
RALGPS1-209ENST00000438723 MSNP26038 577 aaKnown RBP13.29□□□□□ -0.28
RALGPS1-209ENST00000438723 TCERG1O14776 1098 aaKnown RBP13.28□□□□□ -0.28
RALGPS1-209ENST00000438723 MYH16Q9H6N6 1097 aa13.26□□□□□ -0.29
RALGPS1-209ENST00000438723 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
RALGPS1-209ENST00000438723 CHAF1AQ13111 956 aaPredicted RBP13.24□□□□□ -0.29
RALGPS1-209ENST00000438723 HSP90AA2PQ14568 343 aaPredicted RBP13.23□□□□□ -0.29
RALGPS1-209ENST00000438723 HIRIP3Q9BW71 556 aaPredicted RBP13.21□□□□□ -0.29
RALGPS1-209ENST00000438723 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
RALGPS1-209ENST00000438723 CASC1Q6TDU7 716 aa13.16□□□□□ -0.3
RALGPS1-209ENST00000438723 HSCBQ8IWL3 235 aa13.16□□□□□ -0.3
RALGPS1-209ENST00000438723 MS4A1P11836 297 aa13.16□□□□□ -0.3
RALGPS1-209ENST00000438723 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
RALGPS1-209ENST00000438723 GOLGA6L3A6NEY3 463 aa13.15□□□□□ -0.3
RALGPS1-209ENST00000438723 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
RALGPS1-209ENST00000438723 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
RALGPS1-209ENST00000438723 GOLGA6L6A8MZA4 724 aa13.14□□□□□ -0.31
RALGPS1-209ENST00000438723 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
RALGPS1-209ENST00000438723 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
RALGPS1-209ENST00000438723 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
RALGPS1-209ENST00000438723 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
RALGPS1-209ENST00000438723 GSE1Q14687 1217 aa13.13□□□□□ -0.31
RALGPS1-209ENST00000438723 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
RALGPS1-209ENST00000438723 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
RALGPS1-209ENST00000438723 NRDCO43847 1150 aa13.13□□□□□ -0.31
RALGPS1-209ENST00000438723 RGS3P49796 1198 aa13.13□□□□□ -0.31
RALGPS1-209ENST00000438723 CDCA8Q53HL2 280 aa13.1□□□□□ -0.31
RALGPS1-209ENST00000438723 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
RALGPS1-209ENST00000438723 ZRSR1Q15695 479 aaKnown RBP13.08□□□□□ -0.32
RALGPS1-209ENST00000438723 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
RALGPS1-209ENST00000438723 CCNB3Q8WWL7 1395 aa13.07□□□□□ -0.32
RALGPS1-209ENST00000438723 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
RALGPS1-209ENST00000438723 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
RALGPS1-209ENST00000438723 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
RALGPS1-209ENST00000438723 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
RALGPS1-209ENST00000438723 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
RALGPS1-209ENST00000438723 CFAP53Q96M91 514 aa13.02□□□□□ -0.32
RALGPS1-209ENST00000438723 KNSTRNQ9Y448 316 aa13.02□□□□□ -0.33
RALGPS1-209ENST00000438723 TNNT3P45378 269 aaPredicted RBP13.02□□□□□ -0.33
RALGPS1-209ENST00000438723 SIN3AQ96ST3 1273 aa13.02□□□□□ -0.33
RALGPS1-209ENST00000438723 PKNOX2Q96KN3 472 aa13.01□□□□□ -0.33
RALGPS1-209ENST00000438723 ABCC9O60706 1549 aa13.01□□□□□ -0.33
RALGPS1-209ENST00000438723 RB1CC1Q8TDY2 1594 aa13.01□□□□□ -0.33
RALGPS1-209ENST00000438723 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
RALGPS1-209ENST00000438723 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
RALGPS1-209ENST00000438723 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
RALGPS1-209ENST00000438723 PDE3BQ13370 1112 aa13□□□□□ -0.33
RALGPS1-209ENST00000438723 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
RALGPS1-209ENST00000438723 SYAP1Q96A49 352 aaPredicted RBP13□□□□□ -0.33
RALGPS1-209ENST00000438723 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
RALGPS1-209ENST00000438723 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
RALGPS1-209ENST00000438723 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
RALGPS1-209ENST00000438723 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
RALGPS1-209ENST00000438723 MAP7D2Q96T17 732 aa12.99□□□□□ -0.33
RALGPS1-209ENST00000438723 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
RALGPS1-209ENST00000438723 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
RALGPS1-209ENST00000438723 MTERF4Q7Z6M4 381 aaKnown RBP12.97□□□□□ -0.33
RALGPS1-209ENST00000438723 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
RALGPS1-209ENST00000438723 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
RALGPS1-209ENST00000438723 RRP7BPQ9NSQ0 103 aa12.95□□□□□ -0.34
RALGPS1-209ENST00000438723 PDE4AP27815 886 aa12.95□□□□□ -0.34
RALGPS1-209ENST00000438723 RALBP1Q15311 655 aa12.95□□□□□ -0.34
RALGPS1-209ENST00000438723 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
RALGPS1-209ENST00000438723 PABPN1Q86U42 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
RALGPS1-209ENST00000438723 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
RALGPS1-209ENST00000438723 HSPA5P11021 654 aaKnown RBP12.93□□□□□ -0.34
RALGPS1-209ENST00000438723 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
RALGPS1-209ENST00000438723 MCCP23508 829 aa12.92□□□□□ -0.34
RALGPS1-209ENST00000438723 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
RALGPS1-209ENST00000438723 ZBED9Q6R2W3 1325 aa12.92□□□□□ -0.34
RALGPS1-209ENST00000438723 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
RALGPS1-209ENST00000438723 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
RALGPS1-209ENST00000438723 PPP1R15AO75807 674 aaPredicted RBP12.91□□□□□ -0.34
RALGPS1-209ENST00000438723 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.91□□□□□ -0.34
RALGPS1-209ENST00000438723 FAM43AQ8N2R8 423 aa12.91□□□□□ -0.34
RALGPS1-209ENST00000438723 FRAT1Q92837 279 aaPredicted RBP12.91□□□□□ -0.34
RALGPS1-209ENST00000438723 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
RALGPS1-209ENST00000438723 GOLGA6L4A6NEF3 574 aa12.9□□□□□ -0.34
RALGPS1-209ENST00000438723 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
RALGPS1-209ENST00000438723 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
RALGPS1-209ENST00000438723 PHLDB1Q86UU1 1377 aa12.89□□□□□ -0.35
RALGPS1-209ENST00000438723 KTN1Q86UP2 1357 aaKnown RBP12.89□□□□□ -0.35
RALGPS1-209ENST00000438723 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
RALGPS1-209ENST00000438723 TPM2P07951 284 aa12.89□□□□□ -0.35
RALGPS1-209ENST00000438723 CENPQQ7L2Z9 268 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms