RNA–Protein interactions for RNA: ENST00000435889.1

RPS3AP38-201, Transcript of ribosomal protein S3a pseudogene 38, humanhuman

BASIC

Gene RPS3AP38, Length 763 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP38-201ENST00000435889 KLHL34Q8N239 644 aa9.75□□□□□ -0.85
RPS3AP38-201ENST00000435889 TRIM41Q8WV44 630 aa9.71□□□□□ -0.86
RPS3AP38-201ENST00000435889 CLEC11AQ9Y240 323 aa9.71□□□□□ -0.86
RPS3AP38-201ENST00000435889 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
RPS3AP38-201ENST00000435889 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
RPS3AP38-201ENST00000435889 LAMC3Q9Y6N6 1575 aa9.69□□□□□ -0.86
RPS3AP38-201ENST00000435889 WIZO95785 1651 aa9.68□□□□□ -0.86
RPS3AP38-201ENST00000435889 TOP2AP11388 1531 aaKnown RBP9.68□□□□□ -0.86
RPS3AP38-201ENST00000435889 CADPSQ9ULU8 1353 aa9.68□□□□□ -0.86
RPS3AP38-201ENST00000435889 PLEKHG5O94827 1062 aa9.68□□□□□ -0.86
RPS3AP38-201ENST00000435889 PDS5BQ9NTI5 1447 aa9.65□□□□□ -0.86
RPS3AP38-201ENST00000435889 PRR29P0C7W0 189 aa9.65□□□□□ -0.86
RPS3AP38-201ENST00000435889 CUX2O14529 1486 aa9.64□□□□□ -0.87
RPS3AP38-201ENST00000435889 PITPNM1O00562 1244 aa9.63□□□□□ -0.87
RPS3AP38-201ENST00000435889 ZBTB47Q9UFB7 747 aaPredicted RBP9.63□□□□□ -0.87
RPS3AP38-201ENST00000435889 CFTRP13569 1480 aa9.63□□□□□ -0.87
RPS3AP38-201ENST00000435889 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
RPS3AP38-201ENST00000435889 NESP48681 1621 aa9.61□□□□□ -0.87
RPS3AP38-201ENST00000435889 PKD2Q13563 968 aa9.59□□□□□ -0.87
RPS3AP38-201ENST00000435889 PCGF6Q9BYE7 350 aa9.58□□□□□ -0.88
RPS3AP38-201ENST00000435889 HRCP23327 699 aa9.57□□□□□ -0.88
RPS3AP38-201ENST00000435889 CREBZFQ9NS37 354 aa9.57□□□□□ -0.88
RPS3AP38-201ENST00000435889 FAM9AQ8IZU1 332 aaPredicted RBP9.56□□□□□ -0.88
RPS3AP38-201ENST00000435889 CCDC88BA6NC98 1476 aa9.55□□□□□ -0.88
RPS3AP38-201ENST00000435889 FANCD2Q9BXW9 1451 aa9.52□□□□□ -0.89
RPS3AP38-201ENST00000435889 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
RPS3AP38-201ENST00000435889 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
RPS3AP38-201ENST00000435889 MRC2Q9UBG0 1479 aa9.51□□□□□ -0.89
RPS3AP38-201ENST00000435889 CEP164Q9UPV0 1460 aa9.51□□□□□ -0.89
RPS3AP38-201ENST00000435889 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
RPS3AP38-201ENST00000435889 TRIM26Q12899 539 aaPredicted RBP9.5□□□□□ -0.89
RPS3AP38-201ENST00000435889 WDR62O43379 1518 aa9.5□□□□□ -0.89
RPS3AP38-201ENST00000435889 MNX1P50219 401 aaPredicted RBP9.49□□□□□ -0.89
RPS3AP38-201ENST00000435889 NUBP1P53384 320 aa9.48□□□□□ -0.89
RPS3AP38-201ENST00000435889 CHADLQ6NUI6 762 aa9.45□□□□□ -0.9
RPS3AP38-201ENST00000435889 ABCC8Q09428 1581 aa9.45□□□□□ -0.9
RPS3AP38-201ENST00000435889 KIF21AQ7Z4S6 1674 aa9.43□□□□□ -0.9
RPS3AP38-201ENST00000435889 GSE1Q14687 1217 aa9.43□□□□□ -0.9
RPS3AP38-201ENST00000435889 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
RPS3AP38-201ENST00000435889 NPM1P06748 294 aaKnown RBP eCLIP9.42□□□□□ -0.9
RPS3AP38-201ENST00000435889 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
RPS3AP38-201ENST00000435889 EEA1Q15075 1411 aa9.4□□□□□ -0.9
RPS3AP38-201ENST00000435889 RGL2O15211 777 aa9.4□□□□□ -0.9
RPS3AP38-201ENST00000435889 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.9
RPS3AP38-201ENST00000435889 FXR2P51116 673 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPS3AP38-201ENST00000435889 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
RPS3AP38-201ENST00000435889 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
RPS3AP38-201ENST00000435889 FAM212AQ96EL1 285 aa9.39□□□□□ -0.91
RPS3AP38-201ENST00000435889 PRDM2Q13029 1718 aa9.39□□□□□ -0.91
RPS3AP38-201ENST00000435889 SLC24A1O60721 1099 aa9.38□□□□□ -0.91
RPS3AP38-201ENST00000435889 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
RPS3AP38-201ENST00000435889 WRNQ14191 1432 aaPredicted RBP eCLIP9.38□□□□□ -0.91
RPS3AP38-201ENST00000435889 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
RPS3AP38-201ENST00000435889 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
RPS3AP38-201ENST00000435889 IFT140Q96RY7 1462 aa9.35□□□□□ -0.91
RPS3AP38-201ENST00000435889 SOGA1O94964 1423 aa9.35□□□□□ -0.91
RPS3AP38-201ENST00000435889 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
RPS3AP38-201ENST00000435889 DNMBPQ6XZF7 1577 aa9.34□□□□□ -0.91
RPS3AP38-201ENST00000435889 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
RPS3AP38-201ENST00000435889 ZEB1P37275 1124 aaPredicted RBP9.31□□□□□ -0.92
RPS3AP38-201ENST00000435889 GOLGA3Q08378 1498 aa9.3□□□□□ -0.92
RPS3AP38-201ENST00000435889 CEP162Q5TB80 1403 aa9.3□□□□□ -0.92
RPS3AP38-201ENST00000435889 PPARGC1BQ86YN6 1023 aaKnown RBP9.29□□□□□ -0.92
RPS3AP38-201ENST00000435889 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
RPS3AP38-201ENST00000435889 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
RPS3AP38-201ENST00000435889 RUSC2Q8N2Y8 1516 aa9.28□□□□□ -0.92
RPS3AP38-201ENST00000435889 CHRM1P11229 460 aaPredicted RBP9.28□□□□□ -0.92
RPS3AP38-201ENST00000435889 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
RPS3AP38-201ENST00000435889 WDR97A6NE52 1622 aa9.27□□□□□ -0.92
RPS3AP38-201ENST00000435889 SYNJ1O43426 1573 aa9.27□□□□□ -0.93
RPS3AP38-201ENST00000435889 PYGBP11216 843 aa9.26□□□□□ -0.93
RPS3AP38-201ENST00000435889 UBTFP17480 764 aaKnown RBP9.26□□□□□ -0.93
RPS3AP38-201ENST00000435889 CUX1P39880 1505 aa9.26□□□□□ -0.93
RPS3AP38-201ENST00000435889 TARBP1Q13395 1621 aaKnown RBP9.25□□□□□ -0.93
RPS3AP38-201ENST00000435889 RIOK3O14730 519 aaKnown RBP9.25□□□□□ -0.93
RPS3AP38-201ENST00000435889 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
RPS3AP38-201ENST00000435889 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
RPS3AP38-201ENST00000435889 BBXQ8WY36 941 aaPredicted RBP9.24□□□□□ -0.93
RPS3AP38-201ENST00000435889 ZNF608Q9ULD9 1512 aaPredicted RBP9.23□□□□□ -0.93
RPS3AP38-201ENST00000435889 FGD5Q6ZNL6 1462 aa9.22□□□□□ -0.93
RPS3AP38-201ENST00000435889 KIF21BO75037 1637 aa9.21□□□□□ -0.93
RPS3AP38-201ENST00000435889 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
RPS3AP38-201ENST00000435889 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.94
RPS3AP38-201ENST00000435889 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.94
RPS3AP38-201ENST00000435889 TOP2BQ02880 1626 aa9.2□□□□□ -0.94
RPS3AP38-201ENST00000435889 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
RPS3AP38-201ENST00000435889 VGFO15240 615 aaPredicted RBP9.19□□□□□ -0.94
RPS3AP38-201ENST00000435889 HS6ST3Q8IZP7 471 aa9.19□□□□□ -0.94
RPS3AP38-201ENST00000435889 CCDC61Q9Y6R9 512 aa9.19□□□□□ -0.94
RPS3AP38-201ENST00000435889 EIF4G3O43432 1585 aaKnown RBP9.18□□□□□ -0.94
RPS3AP38-201ENST00000435889 AQRO60306 1485 aaKnown RBP eCLIP9.18□□□□□ -0.94
RPS3AP38-201ENST00000435889 RAD54L2Q9Y4B4 1467 aa9.18□□□□□ -0.94
RPS3AP38-201ENST00000435889 BIVM-ERCC5R4GMW8 1640 aa9.16□□□□□ -0.94
RPS3AP38-201ENST00000435889 GRIN2BQ13224 1484 aa9.16□□□□□ -0.94
RPS3AP38-201ENST00000435889 MAGI1Q96QZ7 1491 aaPredicted RBP9.16□□□□□ -0.94
RPS3AP38-201ENST00000435889 CLIP1P30622 1438 aa9.16□□□□□ -0.94
RPS3AP38-201ENST00000435889 TDRD9Q8NDG6 1382 aaKnown RBP9.15□□□□□ -0.94
RPS3AP38-201ENST00000435889 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.94
RPS3AP38-201ENST00000435889 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.95
RPS3AP38-201ENST00000435889 STK25O00506 426 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms