RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 FBXO3Q9UK99 471 aa4.94□□□□□ -1.62
LINC00407-201ENST00000426509 NPM1P06748 294 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC00407-201ENST00000426509 PLCD3Q8N3E9 789 aa4.93□□□□□ -1.62
LINC00407-201ENST00000426509 ZRANB1Q9UGI0 708 aa4.93□□□□□ -1.62
LINC00407-201ENST00000426509 VASPP50552 380 aaPredicted RBP4.92□□□□□ -1.62
LINC00407-201ENST00000426509 NUBP1P53384 320 aa4.92□□□□□ -1.62
LINC00407-201ENST00000426509 RASEFQ8IZ41 740 aa4.92□□□□□ -1.62
LINC00407-201ENST00000426509 ZNF579Q8NAF0 562 aaKnown RBP4.92□□□□□ -1.62
LINC00407-201ENST00000426509 CLCN6P51797 869 aa4.91□□□□□ -1.62
LINC00407-201ENST00000426509 EIF4G1Q04637 1599 aaKnown RBP4.91□□□□□ -1.62
LINC00407-201ENST00000426509 PHF12Q96QT6 1004 aa4.9□□□□□ -1.63
LINC00407-201ENST00000426509 POTEIP0CG38 1075 aa4.89□□□□□ -1.63
LINC00407-201ENST00000426509 TSPYL2Q9H2G4 693 aaPredicted RBP4.89□□□□□ -1.63
LINC00407-201ENST00000426509 CCDC61Q9Y6R9 512 aa4.89□□□□□ -1.63
LINC00407-201ENST00000426509 SHROOM4Q9ULL8 1493 aa4.88□□□□□ -1.63
LINC00407-201ENST00000426509 PLEKHG5O94827 1062 aa4.88□□□□□ -1.63
LINC00407-201ENST00000426509 IFNLR1Q8IU57 520 aaPredicted RBP4.88□□□□□ -1.63
LINC00407-201ENST00000426509 CUX2O14529 1486 aa4.88□□□□□ -1.63
LINC00407-201ENST00000426509 GALR2O43603 387 aaPredicted RBP4.87□□□□□ -1.63
LINC00407-201ENST00000426509 PAK3O75914 559 aaPredicted RBP4.85□□□□□ -1.63
LINC00407-201ENST00000426509 KIF12Q96FN5 646 aa4.85□□□□□ -1.63
LINC00407-201ENST00000426509 ZBTB47Q9UFB7 747 aaPredicted RBP4.85□□□□□ -1.63
LINC00407-201ENST00000426509 DCAF1Q9Y4B6 1507 aa4.84□□□□□ -1.63
LINC00407-201ENST00000426509 KLHL34Q8N239 644 aa4.83□□□□□ -1.64
LINC00407-201ENST00000426509 MS4A3Q96HJ5 214 aa4.83□□□□□ -1.64
LINC00407-201ENST00000426509 PCDH10Q9P2E7 1040 aa4.83□□□□□ -1.64
LINC00407-201ENST00000426509 MAP3K13O43283 966 aa4.82□□□□□ -1.64
LINC00407-201ENST00000426509 DCAF8Q5TAQ9 597 aa4.81□□□□□ -1.64
LINC00407-201ENST00000426509 TRPC6Q9Y210 931 aa4.81□□□□□ -1.64
LINC00407-201ENST00000426509 PELP1Q8IZL8 1130 aaKnown RBP4.8□□□□□ -1.64
LINC00407-201ENST00000426509 DCBLD2Q96PD2 775 aa4.8□□□□□ -1.64
LINC00407-201ENST00000426509 SPOCK2Q92563 424 aa4.79□□□□□ -1.64
LINC00407-201ENST00000426509 FAM212AQ96EL1 285 aa4.79□□□□□ -1.64
LINC00407-201ENST00000426509 ERCC6Q03468 1493 aa4.79□□□□□ -1.64
LINC00407-201ENST00000426509 MYO15BQ96JP2 1530 aa4.78□□□□□ -1.64
LINC00407-201ENST00000426509 SCRIBQ14160 1630 aa4.77□□□□□ -1.65
LINC00407-201ENST00000426509 ATMINO43313 823 aaPredicted RBP4.77□□□□□ -1.65
LINC00407-201ENST00000426509 PYGBP11216 843 aa4.77□□□□□ -1.65
LINC00407-201ENST00000426509 ASTLQ6HA08 431 aaPredicted RBP4.77□□□□□ -1.65
LINC00407-201ENST00000426509 IFNL1Q8IU54 200 aa4.77□□□□□ -1.65
LINC00407-201ENST00000426509 SGIP1Q9BQI5 828 aa4.77□□□□□ -1.65
LINC00407-201ENST00000426509 POTEMA6NI47 508 aa4.76□□□□□ -1.65
LINC00407-201ENST00000426509 CHRM1P11229 460 aaPredicted RBP4.76□□□□□ -1.65
LINC00407-201ENST00000426509 GSE1Q14687 1217 aa4.76□□□□□ -1.65
LINC00407-201ENST00000426509 BMP2KQ9NSY1 1161 aaPredicted RBP4.76□□□□□ -1.65
LINC00407-201ENST00000426509 PCDHB13Q9Y5F0 798 aa4.76□□□□□ -1.65
LINC00407-201ENST00000426509 NESP48681 1621 aa4.75□□□□□ -1.65
LINC00407-201ENST00000426509 ATN1P54259 1190 aaPredicted RBP4.75□□□□□ -1.65
LINC00407-201ENST00000426509 RTN4Q9NQC3 1192 aaKnown RBP4.75□□□□□ -1.65
LINC00407-201ENST00000426509 POTEB2H3BUK9 544 aa4.74□□□□□ -1.65
LINC00407-201ENST00000426509 SUPT5HO00267 1087 aaKnown RBP4.74□□□□□ -1.65
LINC00407-201ENST00000426509 TIE1P35590 1138 aa4.74□□□□□ -1.65
LINC00407-201ENST00000426509 PCDHB8Q9UN66 801 aa4.74□□□□□ -1.65
LINC00407-201ENST00000426509 TTLL13PA6NNM8 815 aa4.73□□□□□ -1.65
LINC00407-201ENST00000426509 POTEGQ6S5H5 508 aa4.73□□□□□ -1.65
LINC00407-201ENST00000426509 CIZ1Q9ULV3 898 aaPredicted RBP4.73□□□□□ -1.65
LINC00407-201ENST00000426509 POTEFA5A3E0 1075 aa4.72□□□□□ -1.65
LINC00407-201ENST00000426509 POTEJP0CG39 1038 aa4.7□□□□□ -1.66
LINC00407-201ENST00000426509 C7P10643 843 aa4.69□□□□□ -1.66
LINC00407-201ENST00000426509 AMER1Q5JTC6 1135 aaPredicted RBP4.69□□□□□ -1.66
LINC00407-201ENST00000426509 SLC39A7Q92504 469 aa4.69□□□□□ -1.66
LINC00407-201ENST00000426509 TMEM106CQ9BVX2 250 aa4.69□□□□□ -1.66
LINC00407-201ENST00000426509 THOC2Q8NI27 1593 aaKnown RBP4.69□□□□□ -1.66
LINC00407-201ENST00000426509 RNF25Q96BH1 459 aaPredicted RBP4.68□□□□□ -1.66
LINC00407-201ENST00000426509 OTUD5Q96G74 571 aa4.68□□□□□ -1.66
LINC00407-201ENST00000426509 METRNQ9UJH8 293 aa4.68□□□□□ -1.66
LINC00407-201ENST00000426509 TRIM35Q9UPQ4 493 aa4.68□□□□□ -1.66
LINC00407-201ENST00000426509 COLQQ9Y215 455 aaPredicted RBP4.68□□□□□ -1.66
LINC00407-201ENST00000426509 PKD2Q13563 968 aa4.67□□□□□ -1.66
LINC00407-201ENST00000426509 ZNF467Q7Z7K2 595 aaPredicted RBP4.67□□□□□ -1.66
LINC00407-201ENST00000426509 PSEN1P49768 467 aa4.66□□□□□ -1.66
LINC00407-201ENST00000426509 MAMSTRQ6ZN01 415 aa4.66□□□□□ -1.66
LINC00407-201ENST00000426509 NCAPD3P42695 1498 aa4.65□□□□□ -1.66
LINC00407-201ENST00000426509 ILDR1Q86SU0 546 aaPredicted RBP4.65□□□□□ -1.67
LINC00407-201ENST00000426509 SMARCA2P51531 1590 aa4.65□□□□□ -1.67
LINC00407-201ENST00000426509 IRX5P78411 483 aaPredicted RBP4.64□□□□□ -1.67
LINC00407-201ENST00000426509 PDAP1Q13442 181 aaKnown RBP4.64□□□□□ -1.67
LINC00407-201ENST00000426509 IER5LQ5T953 404 aa4.64□□□□□ -1.67
LINC00407-201ENST00000426509 ATAD2BQ9ULI0 1458 aa4.62□□□□□ -1.67
LINC00407-201ENST00000426509 RIMBP3CA6NJZ7 1639 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RIMBP3BA6NNM3 1639 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RIMBP3Q9UFD9 1639 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RIOK3O14730 519 aaKnown RBP4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RGL2O15211 777 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 ECM2O94769 699 aaPredicted RBP4.61□□□□□ -1.67
LINC00407-201ENST00000426509 CYB5RLQ6IPT4 315 aa4.61□□□□□ -1.67
LINC00407-201ENST00000426509 RSF1Q96T23 1441 aaPredicted RBP4.61□□□□□ -1.67
LINC00407-201ENST00000426509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.6□□□□□ -1.67
LINC00407-201ENST00000426509 SEC24BO95487 1268 aa4.6□□□□□ -1.67
LINC00407-201ENST00000426509 PDCD7Q8N8D1 485 aaKnown RBP4.6□□□□□ -1.67
LINC00407-201ENST00000426509 ZFP91Q96JP5 570 aaPredicted RBP4.6□□□□□ -1.67
LINC00407-201ENST00000426509 OCEL1Q9H607 264 aa4.6□□□□□ -1.67
LINC00407-201ENST00000426509 BAZ1AQ9NRL2 1556 aaPredicted RBP4.6□□□□□ -1.67
LINC00407-201ENST00000426509 VGFO15240 615 aaPredicted RBP4.59□□□□□ -1.67
LINC00407-201ENST00000426509 DPY19L2Q6NUT2 758 aa4.59□□□□□ -1.67
LINC00407-201ENST00000426509 CABP2Q9NPB3 220 aa4.59□□□□□ -1.67
LINC00407-201ENST00000426509 PLCG2P16885 1265 aa4.58□□□□□ -1.68
LINC00407-201ENST00000426509 EFCAB3Q8N7B9 438 aa4.58□□□□□ -1.68
LINC00407-201ENST00000426509 SCUBE2Q9NQ36 999 aa4.58□□□□□ -1.68
LINC00407-201ENST00000426509 ARHGEF11O15085 1522 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms